RNA–Protein interactions for RNA: ENST00000455042.1

CHGB-202, Transcript of chromogranin B, humanhuman

TSL 3

Gene CHGB, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGB-202ENST00000455042 NISCHQ9Y2I1 1504 aa34.66■■■■□ 3.14
CHGB-202ENST00000455042 CCDC180Q9P1Z9 1646 aa30.35■■■□□ 2.45
CHGB-202ENST00000455042 ABCC9O60706 1549 aa29.4■■■□□ 2.3
CHGB-202ENST00000455042 ZCCHC6Q5VYS8 1495 aaKnown RBP28.99■■■□□ 2.23
CHGB-202ENST00000455042 DCAF8L2P0C7V8 631 aa28.95■■■□□ 2.22
CHGB-202ENST00000455042 DCAF1Q9Y4B6 1507 aa28.61■■■□□ 2.17
CHGB-202ENST00000455042 NACADO15069 1562 aa28.49■■■□□ 2.15
CHGB-202ENST00000455042 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
CHGB-202ENST00000455042 RB1CC1Q8TDY2 1594 aa28.37■■■□□ 2.13
CHGB-202ENST00000455042 SHROOM4Q9ULL8 1493 aa27.99■■■□□ 2.07
CHGB-202ENST00000455042 SCRIBQ14160 1630 aa27.94■■■□□ 2.06
CHGB-202ENST00000455042 PABPN1Q86U42 306 aaKnown RBP eCLIP27.69■■■□□ 2.02
CHGB-202ENST00000455042 UNC13AQ9UPW8 1703 aa27.61■■■□□ 2.01
CHGB-202ENST00000455042 BICRAQ9NZM4 1560 aa27.55■■■□□ 2
CHGB-202ENST00000455042 CECR2Q9BXF3 1484 aa27.04■■□□□ 1.92
CHGB-202ENST00000455042 MROH2BQ7Z745 1585 aa26.78■■□□□ 1.88
CHGB-202ENST00000455042 BAZ1AQ9NRL2 1556 aaPredicted RBP26.78■■□□□ 1.88
CHGB-202ENST00000455042 EIF4G1Q04637 1599 aaKnown RBP26.77■■□□□ 1.88
CHGB-202ENST00000455042 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
CHGB-202ENST00000455042 SMARCA4P51532 1647 aa26.71■■□□□ 1.87
CHGB-202ENST00000455042 SUPT5HO00267 1087 aaKnown RBP26.65■■□□□ 1.86
CHGB-202ENST00000455042 DNAJC5BQ9UF47 199 aa26.53■■□□□ 1.84
CHGB-202ENST00000455042 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
CHGB-202ENST00000455042 ATAD2BQ9ULI0 1458 aa26.5■■□□□ 1.83
CHGB-202ENST00000455042 WIZO95785 1651 aa26.46■■□□□ 1.83
CHGB-202ENST00000455042 PEG3Q9GZU2 1588 aa26.4■■□□□ 1.82
CHGB-202ENST00000455042 SMARCA2P51531 1590 aa26.39■■□□□ 1.82
CHGB-202ENST00000455042 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
CHGB-202ENST00000455042 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
CHGB-202ENST00000455042 TOP2AP11388 1531 aaKnown RBP26.2■■□□□ 1.79
CHGB-202ENST00000455042 HMGXB3Q12766 1538 aa26.2■■□□□ 1.79
CHGB-202ENST00000455042 CCDC88BA6NC98 1476 aa25.98■■□□□ 1.75
CHGB-202ENST00000455042 CADPSQ9ULU8 1353 aa25.68■■□□□ 1.7
CHGB-202ENST00000455042 NESP48681 1621 aa25.63■■□□□ 1.69
CHGB-202ENST00000455042 CFTRP13569 1480 aa25.61■■□□□ 1.69
CHGB-202ENST00000455042 LAMC3Q9Y6N6 1575 aa25.48■■□□□ 1.67
CHGB-202ENST00000455042 PDS5BQ9NTI5 1447 aa25.37■■□□□ 1.65
CHGB-202ENST00000455042 FANCD2Q9BXW9 1451 aa25.36■■□□□ 1.65
CHGB-202ENST00000455042 ERCC6Q03468 1493 aa25.23■■□□□ 1.63
CHGB-202ENST00000455042 CEP164Q9UPV0 1460 aa25.23■■□□□ 1.63
CHGB-202ENST00000455042 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
CHGB-202ENST00000455042 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.62
CHGB-202ENST00000455042 PRDM2Q13029 1718 aa25.17■■□□□ 1.62
CHGB-202ENST00000455042 WRNQ14191 1432 aaPredicted RBP eCLIP25.16■■□□□ 1.62
CHGB-202ENST00000455042 KIF21AQ7Z4S6 1674 aa25.15■■□□□ 1.62
CHGB-202ENST00000455042 MRC2Q9UBG0 1479 aa25.09■■□□□ 1.61
CHGB-202ENST00000455042 TRIM41Q8WV44 630 aa25.08■■□□□ 1.61
CHGB-202ENST00000455042 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
CHGB-202ENST00000455042 CUX1P39880 1505 aa25.07■■□□□ 1.6
CHGB-202ENST00000455042 SYNJ1O43426 1573 aa25.02■■□□□ 1.6
CHGB-202ENST00000455042 TOPBP1Q92547 1522 aa25.01■■□□□ 1.59
CHGB-202ENST00000455042 DNMBPQ6XZF7 1577 aa24.97■■□□□ 1.59
CHGB-202ENST00000455042 THOC2Q8NI27 1593 aaKnown RBP24.95■■□□□ 1.58
CHGB-202ENST00000455042 TOP2BQ02880 1626 aa24.94■■□□□ 1.58
CHGB-202ENST00000455042 WDR62O43379 1518 aa24.93■■□□□ 1.58
CHGB-202ENST00000455042 FGD5Q6ZNL6 1462 aa24.89■■□□□ 1.58
CHGB-202ENST00000455042 BIVM-ERCC5R4GMW8 1640 aa24.88■■□□□ 1.57
CHGB-202ENST00000455042 POLA1P09884 1462 aaPredicted RBP24.85■■□□□ 1.57
CHGB-202ENST00000455042 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
CHGB-202ENST00000455042 SOGA1O94964 1423 aa24.8■■□□□ 1.56
CHGB-202ENST00000455042 CUX2O14529 1486 aa24.78■■□□□ 1.56
CHGB-202ENST00000455042 IFT140Q96RY7 1462 aa24.69■■□□□ 1.54
CHGB-202ENST00000455042 FAM9AQ8IZU1 332 aaPredicted RBP24.65■■□□□ 1.54
CHGB-202ENST00000455042 TDRD9Q8NDG6 1382 aaKnown RBP24.65■■□□□ 1.54
CHGB-202ENST00000455042 RUSC2Q8N2Y8 1516 aa24.63■■□□□ 1.53
CHGB-202ENST00000455042 ABCA10Q8WWZ4 1543 aa24.63■■□□□ 1.53
CHGB-202ENST00000455042 TARBP1Q13395 1621 aaKnown RBP24.62■■□□□ 1.53
CHGB-202ENST00000455042 ZNF608Q9ULD9 1512 aaPredicted RBP24.6■■□□□ 1.53
CHGB-202ENST00000455042 AQRO60306 1485 aaKnown RBP eCLIP24.57■■□□□ 1.52
CHGB-202ENST00000455042 KIF27Q86VH2 1401 aa24.56■■□□□ 1.52
CHGB-202ENST00000455042 WDR97A6NE52 1622 aa24.5■■□□□ 1.51
CHGB-202ENST00000455042 GAPVD1Q14C86 1478 aa24.48■■□□□ 1.51
CHGB-202ENST00000455042 CSRNP3Q8WYN3 585 aa24.46■■□□□ 1.51
CHGB-202ENST00000455042 IGF1RP08069 1367 aa24.45■■□□□ 1.5
CHGB-202ENST00000455042 EEA1Q15075 1411 aa24.44■■□□□ 1.5
CHGB-202ENST00000455042 ABCA5Q8WWZ7 1642 aa24.43■■□□□ 1.5
CHGB-202ENST00000455042 EIF4G3O43432 1585 aaKnown RBP24.41■■□□□ 1.5
CHGB-202ENST00000455042 GRIN2BQ13224 1484 aa24.38■■□□□ 1.49
CHGB-202ENST00000455042 EHMT2Q96KQ7 1210 aa24.35■■□□□ 1.49
CHGB-202ENST00000455042 ERICH3Q5RHP9 1530 aa24.3■■□□□ 1.48
CHGB-202ENST00000455042 CARMIL1Q5VZK9 1371 aa24.3■■□□□ 1.48
CHGB-202ENST00000455042 SNAPC4Q5SXM2 1469 aa24.3■■□□□ 1.48
CHGB-202ENST00000455042 PRXQ9BXM0 1461 aa24.26■■□□□ 1.47
CHGB-202ENST00000455042 LOC105371045A0A1W2PR82 267 aa24.24■■□□□ 1.47
CHGB-202ENST00000455042 PBRM1Q86U86 1689 aa24.24■■□□□ 1.47
CHGB-202ENST00000455042 FHAD1B1AJZ9 1412 aa24.22■■□□□ 1.47
CHGB-202ENST00000455042 FBLN2P98095 1184 aa24.21■■□□□ 1.47
CHGB-202ENST00000455042 MAGI1Q96QZ7 1491 aaPredicted RBP24.2■■□□□ 1.47
CHGB-202ENST00000455042 RAPGEF2Q9Y4G8 1499 aa24.19■■□□□ 1.46
CHGB-202ENST00000455042 CHMP7Q8WUX9 453 aaPredicted RBP24.18■■□□□ 1.46
CHGB-202ENST00000455042 ADAMTS12P58397 1594 aa24.17■■□□□ 1.46
CHGB-202ENST00000455042 CUL7Q14999 1698 aa24.15■■□□□ 1.46
CHGB-202ENST00000455042 SYNJ2O15056 1496 aa24.14■■□□□ 1.46
CHGB-202ENST00000455042 KIF21BO75037 1637 aa24.11■■□□□ 1.45
CHGB-202ENST00000455042 GOLGA3Q08378 1498 aa24.11■■□□□ 1.45
CHGB-202ENST00000455042 UBTFP17480 764 aaKnown RBP24.1■■□□□ 1.45
CHGB-202ENST00000455042 GRIN2AQ12879 1464 aa24.07■■□□□ 1.44
CHGB-202ENST00000455042 TNIKQ9UKE5 1360 aa23.95■■□□□ 1.42
CHGB-202ENST00000455042 RANGAP1P46060 587 aaPredicted RBP23.94■■□□□ 1.42
CHGB-202ENST00000455042 NUP160Q12769 1436 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms