RNA–Protein interactions for RNA: ENST00000454909.6

SATB1-209, Transcript of SATB homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB1, Length 3,755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-209ENST00000454909 NISCHQ9Y2I1 1504 aa14.15□□□□□ -0.14
SATB1-209ENST00000454909 CCDC180Q9P1Z9 1646 aa12.54□□□□□ -0.4
SATB1-209ENST00000454909 ZCCHC6Q5VYS8 1495 aaKnown RBP11.92□□□□□ -0.5
SATB1-209ENST00000454909 DCAF1Q9Y4B6 1507 aa11.83□□□□□ -0.51
SATB1-209ENST00000454909 MYO15BQ96JP2 1530 aa11.73□□□□□ -0.53
SATB1-209ENST00000454909 NACADO15069 1562 aa11.59□□□□□ -0.55
SATB1-209ENST00000454909 ABCC9O60706 1549 aa11.56□□□□□ -0.56
SATB1-209ENST00000454909 RB1CC1Q8TDY2 1594 aa11.48□□□□□ -0.57
SATB1-209ENST00000454909 DCAF8L2P0C7V8 631 aa11.34□□□□□ -0.59
SATB1-209ENST00000454909 SCRIBQ14160 1630 aa11.31□□□□□ -0.6
SATB1-209ENST00000454909 UNC13AQ9UPW8 1703 aa11.28□□□□□ -0.6
SATB1-209ENST00000454909 SHROOM4Q9ULL8 1493 aa11.23□□□□□ -0.61
SATB1-209ENST00000454909 BICRAQ9NZM4 1560 aa11.09□□□□□ -0.63
SATB1-209ENST00000454909 BAZ1AQ9NRL2 1556 aaPredicted RBP10.97□□□□□ -0.65
SATB1-209ENST00000454909 SMARCA4P51532 1647 aa10.92□□□□□ -0.66
SATB1-209ENST00000454909 RSF1Q96T23 1441 aaPredicted RBP10.89□□□□□ -0.67
SATB1-209ENST00000454909 CECR2Q9BXF3 1484 aa10.88□□□□□ -0.67
SATB1-209ENST00000454909 MROH2BQ7Z745 1585 aa10.87□□□□□ -0.67
SATB1-209ENST00000454909 PEG3Q9GZU2 1588 aa10.86□□□□□ -0.67
SATB1-209ENST00000454909 WIZO95785 1651 aa10.8□□□□□ -0.68
SATB1-209ENST00000454909 PABPN1Q86U42 306 aaKnown RBP eCLIP10.78□□□□□ -0.68
SATB1-209ENST00000454909 SUPT5HO00267 1087 aaKnown RBP10.77□□□□□ -0.69
SATB1-209ENST00000454909 TOP2AP11388 1531 aaKnown RBP10.77□□□□□ -0.69
SATB1-209ENST00000454909 SMARCA2P51531 1590 aa10.76□□□□□ -0.69
SATB1-209ENST00000454909 EIF4G1Q04637 1599 aaKnown RBP10.75□□□□□ -0.69
SATB1-209ENST00000454909 HMGXB3Q12766 1538 aa10.7□□□□□ -0.7
SATB1-209ENST00000454909 ATAD2BQ9ULI0 1458 aa10.68□□□□□ -0.7
SATB1-209ENST00000454909 NCAPD3P42695 1498 aa10.63□□□□□ -0.71
SATB1-209ENST00000454909 BAZ1BQ9UIG0 1483 aaKnown RBP10.62□□□□□ -0.71
SATB1-209ENST00000454909 CC2D2AQ9P2K1 1620 aa10.58□□□□□ -0.72
SATB1-209ENST00000454909 CCDC88BA6NC98 1476 aa10.55□□□□□ -0.72
SATB1-209ENST00000454909 PRDM2Q13029 1718 aa10.52□□□□□ -0.72
SATB1-209ENST00000454909 CHIC1Q5VXU3 224 aa10.4□□□□□ -0.75
SATB1-209ENST00000454909 CFTRP13569 1480 aa10.37□□□□□ -0.75
SATB1-209ENST00000454909 LAMC3Q9Y6N6 1575 aa10.34□□□□□ -0.75
SATB1-209ENST00000454909 BIVM-ERCC5R4GMW8 1640 aa10.33□□□□□ -0.76
SATB1-209ENST00000454909 CADPSQ9ULU8 1353 aa10.29□□□□□ -0.76
SATB1-209ENST00000454909 ABCC8Q09428 1581 aa10.29□□□□□ -0.76
SATB1-209ENST00000454909 TOP2BQ02880 1626 aa10.28□□□□□ -0.76
SATB1-209ENST00000454909 WRNQ14191 1432 aaPredicted RBP eCLIP10.26□□□□□ -0.77
SATB1-209ENST00000454909 SYNJ1O43426 1573 aa10.26□□□□□ -0.77
SATB1-209ENST00000454909 TRIM41Q8WV44 630 aa10.22□□□□□ -0.77
SATB1-209ENST00000454909 EEA1Q15075 1411 aa10.21□□□□□ -0.78
SATB1-209ENST00000454909 FANCD2Q9BXW9 1451 aa10.19□□□□□ -0.78
SATB1-209ENST00000454909 CUX1P39880 1505 aa10.19□□□□□ -0.78
SATB1-209ENST00000454909 DNMBPQ6XZF7 1577 aa10.19□□□□□ -0.78
SATB1-209ENST00000454909 KIF21AQ7Z4S6 1674 aa10.18□□□□□ -0.78
SATB1-209ENST00000454909 PDS5BQ9NTI5 1447 aa10.17□□□□□ -0.78
SATB1-209ENST00000454909 CEP164Q9UPV0 1460 aa10.16□□□□□ -0.78
SATB1-209ENST00000454909 NESP48681 1621 aa10.15□□□□□ -0.79
SATB1-209ENST00000454909 WDR97A6NE52 1622 aa10.11□□□□□ -0.79
SATB1-209ENST00000454909 TOPBP1Q92547 1522 aa10.1□□□□□ -0.79
SATB1-209ENST00000454909 KIF21BO75037 1637 aa10.1□□□□□ -0.79
SATB1-209ENST00000454909 DNAJC5BQ9UF47 199 aa10.1□□□□□ -0.79
SATB1-209ENST00000454909 URB2Q14146 1524 aaKnown RBP10.07□□□□□ -0.8
SATB1-209ENST00000454909 FGD5Q6ZNL6 1462 aa10.07□□□□□ -0.8
SATB1-209ENST00000454909 MRC2Q9UBG0 1479 aa10.07□□□□□ -0.8
SATB1-209ENST00000454909 WDR62O43379 1518 aa10.06□□□□□ -0.8
SATB1-209ENST00000454909 THOC2Q8NI27 1593 aaKnown RBP10.05□□□□□ -0.8
SATB1-209ENST00000454909 SOGA1O94964 1423 aa10.04□□□□□ -0.8
SATB1-209ENST00000454909 ABCA10Q8WWZ4 1543 aa10.04□□□□□ -0.8
SATB1-209ENST00000454909 ERICH3Q5RHP9 1530 aa10.04□□□□□ -0.8
SATB1-209ENST00000454909 POLA1P09884 1462 aaPredicted RBP10.03□□□□□ -0.8
SATB1-209ENST00000454909 KIF27Q86VH2 1401 aa10.02□□□□□ -0.81
SATB1-209ENST00000454909 TARBP1Q13395 1621 aaKnown RBP10.01□□□□□ -0.81
SATB1-209ENST00000454909 ABCA5Q8WWZ7 1642 aa10.01□□□□□ -0.81
SATB1-209ENST00000454909 CUL7Q14999 1698 aa10□□□□□ -0.81
SATB1-209ENST00000454909 GOLGA3Q08378 1498 aa10□□□□□ -0.81
SATB1-209ENST00000454909 RUSC2Q8N2Y8 1516 aa9.99□□□□□ -0.81
SATB1-209ENST00000454909 PRXQ9BXM0 1461 aa9.97□□□□□ -0.81
SATB1-209ENST00000454909 CSRNP3Q8WYN3 585 aa9.97□□□□□ -0.81
SATB1-209ENST00000454909 CUX2O14529 1486 aa9.96□□□□□ -0.81
SATB1-209ENST00000454909 ERCC6Q03468 1493 aa9.96□□□□□ -0.82
SATB1-209ENST00000454909 PBRM1Q86U86 1689 aa9.96□□□□□ -0.82
SATB1-209ENST00000454909 IFT140Q96RY7 1462 aa9.95□□□□□ -0.82
SATB1-209ENST00000454909 TNIKQ9UKE5 1360 aa9.93□□□□□ -0.82
SATB1-209ENST00000454909 RAD54L2Q9Y4B4 1467 aa9.92□□□□□ -0.82
SATB1-209ENST00000454909 FAM9AQ8IZU1 332 aaPredicted RBP9.9□□□□□ -0.82
SATB1-209ENST00000454909 CTTNBP2Q8WZ74 1663 aa9.89□□□□□ -0.83
SATB1-209ENST00000454909 GAPVD1Q14C86 1478 aa9.88□□□□□ -0.83
SATB1-209ENST00000454909 RAPGEF2Q9Y4G8 1499 aa9.88□□□□□ -0.83
SATB1-209ENST00000454909 IGF1RP08069 1367 aa9.88□□□□□ -0.83
SATB1-209ENST00000454909 LOC105371045A0A1W2PR82 267 aa9.87□□□□□ -0.83
SATB1-209ENST00000454909 EIF4G3O43432 1585 aaKnown RBP9.87□□□□□ -0.83
SATB1-209ENST00000454909 ADAMTS12P58397 1594 aa9.87□□□□□ -0.83
SATB1-209ENST00000454909 CEP162Q5TB80 1403 aa9.85□□□□□ -0.83
SATB1-209ENST00000454909 GRIN2BQ13224 1484 aa9.84□□□□□ -0.83
SATB1-209ENST00000454909 CARMIL1Q5VZK9 1371 aa9.83□□□□□ -0.84
SATB1-209ENST00000454909 MAGI1Q96QZ7 1491 aaPredicted RBP9.81□□□□□ -0.84
SATB1-209ENST00000454909 FHAD1B1AJZ9 1412 aa9.81□□□□□ -0.84
SATB1-209ENST00000454909 EFCAB5A4FU69 1503 aa9.79□□□□□ -0.84
SATB1-209ENST00000454909 TDRD9Q8NDG6 1382 aaKnown RBP9.78□□□□□ -0.84
SATB1-209ENST00000454909 ZNF608Q9ULD9 1512 aaPredicted RBP9.78□□□□□ -0.84
SATB1-209ENST00000454909 CLIP1P30622 1438 aa9.77□□□□□ -0.84
SATB1-209ENST00000454909 UBTFP17480 764 aaKnown RBP9.76□□□□□ -0.85
SATB1-209ENST00000454909 AQRO60306 1485 aaKnown RBP eCLIP9.75□□□□□ -0.85
SATB1-209ENST00000454909 SAMD9Q5K651 1589 aa9.75□□□□□ -0.85
SATB1-209ENST00000454909 SNAPC4Q5SXM2 1469 aa9.74□□□□□ -0.85
SATB1-209ENST00000454909 SYNJ2O15056 1496 aa9.73□□□□□ -0.85
SATB1-209ENST00000454909 VPS8Q8N3P4 1428 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 212.1 ms