RNA–Protein interactions for RNA: ENST00000454477.1

LINC01875-201, Transcript of long intergenic non-protein coding RNA 1875, humanhuman

TSL 1 (best) BASIC

Gene LINC01875, Length 660 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01875-201ENST00000454477 NISCHQ9Y2I1 1504 aa30.94■■■□□ 2.54
LINC01875-201ENST00000454477 ABCC9O60706 1549 aa29.52■■■□□ 2.32
LINC01875-201ENST00000454477 DNAJC5BQ9UF47 199 aa29.09■■■□□ 2.25
LINC01875-201ENST00000454477 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
LINC01875-201ENST00000454477 DNAJC5Q9H3Z4 198 aa27.96■■■□□ 2.07
LINC01875-201ENST00000454477 RB1CC1Q8TDY2 1594 aa27.49■■□□□ 1.99
LINC01875-201ENST00000454477 PABPN1Q86U42 306 aaKnown RBP eCLIP27.17■■□□□ 1.94
LINC01875-201ENST00000454477 NACADO15069 1562 aa26.94■■□□□ 1.9
LINC01875-201ENST00000454477 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
LINC01875-201ENST00000454477 UNC13AQ9UPW8 1703 aa26.8■■□□□ 1.88
LINC01875-201ENST00000454477 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
LINC01875-201ENST00000454477 CC2D2AQ9P2K1 1620 aa26.63■■□□□ 1.85
LINC01875-201ENST00000454477 SHROOM4Q9ULL8 1493 aa26.36■■□□□ 1.81
LINC01875-201ENST00000454477 CUX2O14529 1486 aa26.23■■□□□ 1.79
LINC01875-201ENST00000454477 EIF4G1Q04637 1599 aaKnown RBP26.21■■□□□ 1.79
LINC01875-201ENST00000454477 DCAF8L2P0C7V8 631 aa26.2■■□□□ 1.78
LINC01875-201ENST00000454477 MYO15BQ96JP2 1530 aa26.13■■□□□ 1.77
LINC01875-201ENST00000454477 TRIM41Q8WV44 630 aa25.94■■□□□ 1.74
LINC01875-201ENST00000454477 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
LINC01875-201ENST00000454477 DCAF1Q9Y4B6 1507 aa25.66■■□□□ 1.7
LINC01875-201ENST00000454477 ERCC6Q03468 1493 aa25.64■■□□□ 1.69
LINC01875-201ENST00000454477 SCRIBQ14160 1630 aa25.42■■□□□ 1.66
LINC01875-201ENST00000454477 THOC2Q8NI27 1593 aaKnown RBP25.06■■□□□ 1.6
LINC01875-201ENST00000454477 NESP48681 1621 aa24.9■■□□□ 1.58
LINC01875-201ENST00000454477 NCAPD3P42695 1498 aa24.89■■□□□ 1.58
LINC01875-201ENST00000454477 AEBP2Q6ZN18 517 aaPredicted RBP24.87■■□□□ 1.57
LINC01875-201ENST00000454477 BAZ1AQ9NRL2 1556 aaPredicted RBP24.7■■□□□ 1.54
LINC01875-201ENST00000454477 SMARCA2P51531 1590 aa24.69■■□□□ 1.54
LINC01875-201ENST00000454477 OSCARQ8IYS5 282 aa24.67■■□□□ 1.54
LINC01875-201ENST00000454477 HMGXB3Q12766 1538 aa24.58■■□□□ 1.53
LINC01875-201ENST00000454477 LAMC3Q9Y6N6 1575 aa24.58■■□□□ 1.52
LINC01875-201ENST00000454477 ATAD2BQ9ULI0 1458 aa24.55■■□□□ 1.52
LINC01875-201ENST00000454477 KIF21AQ7Z4S6 1674 aa24.55■■□□□ 1.52
LINC01875-201ENST00000454477 RIMBP3CA6NJZ7 1639 aa24.54■■□□□ 1.52
LINC01875-201ENST00000454477 RIMBP3BA6NNM3 1639 aa24.54■■□□□ 1.52
LINC01875-201ENST00000454477 RIMBP3Q9UFD9 1639 aa24.54■■□□□ 1.52
LINC01875-201ENST00000454477 PDS5BQ9NTI5 1447 aa24.48■■□□□ 1.51
LINC01875-201ENST00000454477 WDR62O43379 1518 aa24.37■■□□□ 1.49
LINC01875-201ENST00000454477 TRHP20396 242 aaPredicted RBP24.37■■□□□ 1.49
LINC01875-201ENST00000454477 MRC2Q9UBG0 1479 aa24.35■■□□□ 1.49
LINC01875-201ENST00000454477 ARHGEF11O15085 1522 aa24.32■■□□□ 1.48
LINC01875-201ENST00000454477 BAZ1BQ9UIG0 1483 aaKnown RBP24.21■■□□□ 1.47
LINC01875-201ENST00000454477 CYB5RLQ6IPT4 315 aa24.14■■□□□ 1.45
LINC01875-201ENST00000454477 ILDR1Q86SU0 546 aaPredicted RBP24.13■■□□□ 1.45
LINC01875-201ENST00000454477 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
LINC01875-201ENST00000454477 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
LINC01875-201ENST00000454477 ARAP1Q96P48 1450 aa23.97■■□□□ 1.43
LINC01875-201ENST00000454477 PEG3Q9GZU2 1588 aa23.96■■□□□ 1.43
LINC01875-201ENST00000454477 CEP164Q9UPV0 1460 aa23.93■■□□□ 1.42
LINC01875-201ENST00000454477 MROH2BQ7Z745 1585 aa23.78■■□□□ 1.4
LINC01875-201ENST00000454477 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
LINC01875-201ENST00000454477 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
LINC01875-201ENST00000454477 URB2Q14146 1524 aaKnown RBP23.64■■□□□ 1.38
LINC01875-201ENST00000454477 ZNF608Q9ULD9 1512 aaPredicted RBP23.58■■□□□ 1.36
LINC01875-201ENST00000454477 IFT140Q96RY7 1462 aa23.53■■□□□ 1.36
LINC01875-201ENST00000454477 CHD1O14646 1710 aa23.49■■□□□ 1.35
LINC01875-201ENST00000454477 CFTRP13569 1480 aa23.44■■□□□ 1.34
LINC01875-201ENST00000454477 WIZO95785 1651 aa23.41■■□□□ 1.34
LINC01875-201ENST00000454477 EIF4G3O43432 1585 aaKnown RBP23.4■■□□□ 1.34
LINC01875-201ENST00000454477 TOP2AP11388 1531 aaKnown RBP23.29■■□□□ 1.32
LINC01875-201ENST00000454477 CLASP1Q7Z460 1538 aa23.26■■□□□ 1.31
LINC01875-201ENST00000454477 FBLN2P98095 1184 aa23.25■■□□□ 1.31
LINC01875-201ENST00000454477 KDM4FA0A1W2PPD8 638 aa23.23■■□□□ 1.31
LINC01875-201ENST00000454477 AQRO60306 1485 aaKnown RBP eCLIP23.15■■□□□ 1.3
LINC01875-201ENST00000454477 GAPVD1Q14C86 1478 aa23.11■■□□□ 1.29
LINC01875-201ENST00000454477 TOPBP1Q92547 1522 aa23.11■■□□□ 1.29
LINC01875-201ENST00000454477 SYNJ1O43426 1573 aa23.09■■□□□ 1.29
LINC01875-201ENST00000454477 ERCC6L2Q5T890 1561 aa23.08■■□□□ 1.29
LINC01875-201ENST00000454477 CCDC88BA6NC98 1476 aa23.05■■□□□ 1.28
LINC01875-201ENST00000454477 TARBP1Q13395 1621 aaKnown RBP23.04■■□□□ 1.28
LINC01875-201ENST00000454477 PRDM2Q13029 1718 aa23.04■■□□□ 1.28
LINC01875-201ENST00000454477 FBXO41Q8TF61 875 aa23.01■■□□□ 1.27
LINC01875-201ENST00000454477 ABCC8Q09428 1581 aa23.01■■□□□ 1.27
LINC01875-201ENST00000454477 KIF13AQ9H1H9 1805 aa23■■□□□ 1.27
LINC01875-201ENST00000454477 SUPT5HO00267 1087 aaKnown RBP22.91■■□□□ 1.26
LINC01875-201ENST00000454477 SNAPC4Q5SXM2 1469 aa22.91■■□□□ 1.26
LINC01875-201ENST00000454477 DNMBPQ6XZF7 1577 aa22.9■■□□□ 1.26
LINC01875-201ENST00000454477 HECW2Q9P2P5 1572 aa22.9■■□□□ 1.26
LINC01875-201ENST00000454477 LMTK3Q96Q04 1460 aa22.89■■□□□ 1.25
LINC01875-201ENST00000454477 CHMP7Q8WUX9 453 aaPredicted RBP22.88■■□□□ 1.25
LINC01875-201ENST00000454477 MAGI1Q96QZ7 1491 aaPredicted RBP22.84■■□□□ 1.25
LINC01875-201ENST00000454477 WDR97A6NE52 1622 aa22.79■■□□□ 1.24
LINC01875-201ENST00000454477 KDM6BO15054 1643 aa22.79■■□□□ 1.24
LINC01875-201ENST00000454477 POLA1P09884 1462 aaPredicted RBP22.78■■□□□ 1.24
LINC01875-201ENST00000454477 SOCS7O14512 581 aa22.77■■□□□ 1.24
LINC01875-201ENST00000454477 SYNJ2O15056 1496 aa22.77■■□□□ 1.24
LINC01875-201ENST00000454477 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
LINC01875-201ENST00000454477 ABCC10Q5T3U5 1492 aa22.7■■□□□ 1.22
LINC01875-201ENST00000454477 ADGRL1O94910 1474 aa22.69■■□□□ 1.22
LINC01875-201ENST00000454477 FAM69CQ0P6D2 419 aa22.66■■□□□ 1.22
LINC01875-201ENST00000454477 RAD54L2Q9Y4B4 1467 aa22.66■■□□□ 1.22
LINC01875-201ENST00000454477 GRIN2BQ13224 1484 aa22.65■■□□□ 1.22
LINC01875-201ENST00000454477 SOGA1O94964 1423 aa22.61■■□□□ 1.21
LINC01875-201ENST00000454477 DIP2BQ9P265 1576 aa22.59■■□□□ 1.21
LINC01875-201ENST00000454477 CEP170Q5SW79 1584 aa22.55■■□□□ 1.2
LINC01875-201ENST00000454477 ILDR2Q71H61 639 aa22.54■■□□□ 1.2
LINC01875-201ENST00000454477 MAPKBP1O60336 1514 aa22.53■■□□□ 1.2
LINC01875-201ENST00000454477 SHROOM2Q13796 1616 aa22.44■■□□□ 1.18
LINC01875-201ENST00000454477 PBRM1Q86U86 1689 aa22.4■■□□□ 1.18
LINC01875-201ENST00000454477 DISP3Q9P2K9 1392 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms