RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 AEBP2Q6ZN18 517 aaPredicted RBP25.45■■□□□ 1.66
CDC42EP3-203ENST00000453555 CHIC1Q5VXU3 224 aa24.29■■□□□ 1.48
CDC42EP3-203ENST00000453555 NISCHQ9Y2I1 1504 aa23.19■■□□□ 1.3
CDC42EP3-203ENST00000453555 SENP3Q9H4L4 574 aaPredicted RBP21.63■■□□□ 1.05
CDC42EP3-203ENST00000453555 PHF23Q9BUL5 403 aaPredicted RBP21.4■■□□□ 1.02
CDC42EP3-203ENST00000453555 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
CDC42EP3-203ENST00000453555 ABCC9O60706 1549 aa20.43■□□□□ 0.86
CDC42EP3-203ENST00000453555 FOXD1Q16676 465 aa20.18■□□□□ 0.82
CDC42EP3-203ENST00000453555 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
CDC42EP3-203ENST00000453555 DCAF8L2P0C7V8 631 aa19.52■□□□□ 0.72
CDC42EP3-203ENST00000453555 NACADO15069 1562 aa19.47■□□□□ 0.71
CDC42EP3-203ENST00000453555 PLPPR3Q6T4P5 718 aa19.46■□□□□ 0.71
CDC42EP3-203ENST00000453555 ZCCHC6Q5VYS8 1495 aaKnown RBP19.28■□□□□ 0.68
CDC42EP3-203ENST00000453555 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
CDC42EP3-203ENST00000453555 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
CDC42EP3-203ENST00000453555 DCAF1Q9Y4B6 1507 aa19.14■□□□□ 0.65
CDC42EP3-203ENST00000453555 PABPN1Q86U42 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
CDC42EP3-203ENST00000453555 PPP6R1Q9UPN7 881 aa19.01■□□□□ 0.63
CDC42EP3-203ENST00000453555 BICRAQ9NZM4 1560 aa18.98■□□□□ 0.63
CDC42EP3-203ENST00000453555 ADRA2BP18089 450 aa18.95■□□□□ 0.62
CDC42EP3-203ENST00000453555 SCRIBQ14160 1630 aa18.92■□□□□ 0.62
CDC42EP3-203ENST00000453555 PIAS4Q8N2W9 510 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP3-203ENST00000453555 DNAJC5BQ9UF47 199 aa18.86■□□□□ 0.61
CDC42EP3-203ENST00000453555 MSH5O43196 834 aa18.78■□□□□ 0.6
CDC42EP3-203ENST00000453555 SHROOM4Q9ULL8 1493 aa18.67■□□□□ 0.58
CDC42EP3-203ENST00000453555 EIF4G1Q04637 1599 aaKnown RBP18.48■□□□□ 0.55
CDC42EP3-203ENST00000453555 CC2D2AQ9P2K1 1620 aa18.47■□□□□ 0.55
CDC42EP3-203ENST00000453555 CECR2Q9BXF3 1484 aa18.33■□□□□ 0.53
CDC42EP3-203ENST00000453555 POTEDQ86YR6 584 aa18.1■□□□□ 0.49
CDC42EP3-203ENST00000453555 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
CDC42EP3-203ENST00000453555 BAZ1AQ9NRL2 1556 aaPredicted RBP17.99■□□□□ 0.47
CDC42EP3-203ENST00000453555 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
CDC42EP3-203ENST00000453555 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
CDC42EP3-203ENST00000453555 SMARCA2P51531 1590 aa17.93■□□□□ 0.46
CDC42EP3-203ENST00000453555 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
CDC42EP3-203ENST00000453555 HMGXB3Q12766 1538 aa17.86■□□□□ 0.45
CDC42EP3-203ENST00000453555 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.45
CDC42EP3-203ENST00000453555 BAZ1BQ9UIG0 1483 aaKnown RBP17.82■□□□□ 0.44
CDC42EP3-203ENST00000453555 WIZO95785 1651 aa17.75■□□□□ 0.43
CDC42EP3-203ENST00000453555 NESP48681 1621 aa17.64■□□□□ 0.41
CDC42EP3-203ENST00000453555 RSF1Q96T23 1441 aaPredicted RBP17.61■□□□□ 0.41
CDC42EP3-203ENST00000453555 ERCC6Q03468 1493 aa17.6■□□□□ 0.41
CDC42EP3-203ENST00000453555 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
CDC42EP3-203ENST00000453555 TOP2AP11388 1531 aaKnown RBP17.48■□□□□ 0.39
CDC42EP3-203ENST00000453555 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
CDC42EP3-203ENST00000453555 CUX2O14529 1486 aa17.43■□□□□ 0.38
CDC42EP3-203ENST00000453555 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
CDC42EP3-203ENST00000453555 PDS5BQ9NTI5 1447 aa17.39■□□□□ 0.38
CDC42EP3-203ENST00000453555 THOC2Q8NI27 1593 aaKnown RBP17.39■□□□□ 0.37
CDC42EP3-203ENST00000453555 MAPK8IP2Q13387 824 aaPredicted RBP17.37■□□□□ 0.37
CDC42EP3-203ENST00000453555 CCDC88BA6NC98 1476 aa17.29■□□□□ 0.36
CDC42EP3-203ENST00000453555 CFTRP13569 1480 aa17.29■□□□□ 0.36
CDC42EP3-203ENST00000453555 SCAF1Q9H7N4 1312 aaKnown RBP17.27■□□□□ 0.36
CDC42EP3-203ENST00000453555 PRDM2Q13029 1718 aa17.27■□□□□ 0.35
CDC42EP3-203ENST00000453555 FANCD2Q9BXW9 1451 aa17.25■□□□□ 0.35
CDC42EP3-203ENST00000453555 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
CDC42EP3-203ENST00000453555 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
CDC42EP3-203ENST00000453555 DMRT2Q9Y5R5 561 aa17.19■□□□□ 0.34
CDC42EP3-203ENST00000453555 WDR62O43379 1518 aa17.19■□□□□ 0.34
CDC42EP3-203ENST00000453555 SUPT5HO00267 1087 aaKnown RBP17.12■□□□□ 0.33
CDC42EP3-203ENST00000453555 PPP4R3CPQ6ZMV5 832 aa17.1■□□□□ 0.33
CDC42EP3-203ENST00000453555 URB2Q14146 1524 aaKnown RBP17.1■□□□□ 0.33
CDC42EP3-203ENST00000453555 DNAJC5Q9H3Z4 198 aa17.07■□□□□ 0.32
CDC42EP3-203ENST00000453555 TOPBP1Q92547 1522 aa16.96■□□□□ 0.31
CDC42EP3-203ENST00000453555 DNMBPQ6XZF7 1577 aa16.94■□□□□ 0.3
CDC42EP3-203ENST00000453555 ABCC8Q09428 1581 aa16.92■□□□□ 0.3
CDC42EP3-203ENST00000453555 IFT140Q96RY7 1462 aa16.87■□□□□ 0.29
CDC42EP3-203ENST00000453555 ZNF608Q9ULD9 1512 aaPredicted RBP16.85■□□□□ 0.29
CDC42EP3-203ENST00000453555 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
CDC42EP3-203ENST00000453555 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
CDC42EP3-203ENST00000453555 EIF4G3O43432 1585 aaKnown RBP16.79■□□□□ 0.28
CDC42EP3-203ENST00000453555 CUX1P39880 1505 aa16.79■□□□□ 0.28
CDC42EP3-203ENST00000453555 FGD5Q6ZNL6 1462 aa16.76■□□□□ 0.27
CDC42EP3-203ENST00000453555 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
CDC42EP3-203ENST00000453555 SOGA1O94964 1423 aa16.74■□□□□ 0.27
CDC42EP3-203ENST00000453555 AQRO60306 1485 aaKnown RBP eCLIP16.73■□□□□ 0.27
CDC42EP3-203ENST00000453555 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
CDC42EP3-203ENST00000453555 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
CDC42EP3-203ENST00000453555 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
CDC42EP3-203ENST00000453555 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
CDC42EP3-203ENST00000453555 CHD1O14646 1710 aa16.66■□□□□ 0.26
CDC42EP3-203ENST00000453555 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
CDC42EP3-203ENST00000453555 HOXD11P31277 338 aaPredicted RBP16.62■□□□□ 0.25
CDC42EP3-203ENST00000453555 SYNJ1O43426 1573 aa16.62■□□□□ 0.25
CDC42EP3-203ENST00000453555 TOP2BQ02880 1626 aa16.61■□□□□ 0.25
CDC42EP3-203ENST00000453555 WRNQ14191 1432 aaPredicted RBP eCLIP16.61■□□□□ 0.25
CDC42EP3-203ENST00000453555 PBRM1Q86U86 1689 aa16.59■□□□□ 0.25
CDC42EP3-203ENST00000453555 FBLN2P98095 1184 aa16.59■□□□□ 0.25
CDC42EP3-203ENST00000453555 SNAPC4Q5SXM2 1469 aa16.57■□□□□ 0.24
CDC42EP3-203ENST00000453555 ABCA10Q8WWZ4 1543 aa16.56■□□□□ 0.24
CDC42EP3-203ENST00000453555 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
CDC42EP3-203ENST00000453555 RNF216Q9NWF9 866 aaPredicted RBP16.54■□□□□ 0.24
CDC42EP3-203ENST00000453555 ABCA5Q8WWZ7 1642 aa16.54■□□□□ 0.24
CDC42EP3-203ENST00000453555 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
CDC42EP3-203ENST00000453555 TRIM41Q8WV44 630 aa16.52■□□□□ 0.24
CDC42EP3-203ENST00000453555 MAGI1Q96QZ7 1491 aaPredicted RBP16.51■□□□□ 0.23
CDC42EP3-203ENST00000453555 RIMBP3CA6NJZ7 1639 aa16.5■□□□□ 0.23
CDC42EP3-203ENST00000453555 RIMBP3BA6NNM3 1639 aa16.5■□□□□ 0.23
CDC42EP3-203ENST00000453555 RIMBP3Q9UFD9 1639 aa16.5■□□□□ 0.23
CDC42EP3-203ENST00000453555 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
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