RNA–Protein interactions for RNA: ENST00000453516.5

ARFGAP3-204, Transcript of ADP ribosylation factor GTPase activating protein 3, humanhuman

TSL 3

Gene ARFGAP3, Length 817 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP3-204ENST00000453516 NISCHQ9Y2I1 1504 aa25.08■■□□□ 1.61
ARFGAP3-204ENST00000453516 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
ARFGAP3-204ENST00000453516 CHIC1Q5VXU3 224 aa23.14■■□□□ 1.29
ARFGAP3-204ENST00000453516 CCDC180Q9P1Z9 1646 aa22.3■■□□□ 1.16
ARFGAP3-204ENST00000453516 ABCC9O60706 1549 aa21.75■■□□□ 1.07
ARFGAP3-204ENST00000453516 DCAF8L2P0C7V8 631 aa20.98■□□□□ 0.95
ARFGAP3-204ENST00000453516 RB1CC1Q8TDY2 1594 aa20.93■□□□□ 0.94
ARFGAP3-204ENST00000453516 ZCCHC6Q5VYS8 1495 aaKnown RBP20.93■□□□□ 0.94
ARFGAP3-204ENST00000453516 NACADO15069 1562 aa20.9■□□□□ 0.94
ARFGAP3-204ENST00000453516 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
ARFGAP3-204ENST00000453516 MYO15BQ96JP2 1530 aa20.75■□□□□ 0.91
ARFGAP3-204ENST00000453516 DCAF1Q9Y4B6 1507 aa20.72■□□□□ 0.91
ARFGAP3-204ENST00000453516 UNC13AQ9UPW8 1703 aa20.5■□□□□ 0.87
ARFGAP3-204ENST00000453516 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
ARFGAP3-204ENST00000453516 SCRIBQ14160 1630 aa20.41■□□□□ 0.86
ARFGAP3-204ENST00000453516 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
ARFGAP3-204ENST00000453516 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
ARFGAP3-204ENST00000453516 SHROOM4Q9ULL8 1493 aa20.04■□□□□ 0.8
ARFGAP3-204ENST00000453516 DNAJC5BQ9UF47 199 aa19.81■□□□□ 0.76
ARFGAP3-204ENST00000453516 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
ARFGAP3-204ENST00000453516 CC2D2AQ9P2K1 1620 aa19.66■□□□□ 0.74
ARFGAP3-204ENST00000453516 CECR2Q9BXF3 1484 aa19.55■□□□□ 0.72
ARFGAP3-204ENST00000453516 SMARCA4P51532 1647 aa19.48■□□□□ 0.71
ARFGAP3-204ENST00000453516 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
ARFGAP3-204ENST00000453516 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
ARFGAP3-204ENST00000453516 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
ARFGAP3-204ENST00000453516 ATAD2BQ9ULI0 1458 aa19.31■□□□□ 0.68
ARFGAP3-204ENST00000453516 FOXD1Q16676 465 aa19.28■□□□□ 0.68
ARFGAP3-204ENST00000453516 NCAPD3P42695 1498 aa19.26■□□□□ 0.67
ARFGAP3-204ENST00000453516 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
ARFGAP3-204ENST00000453516 HMGXB3Q12766 1538 aa19.21■□□□□ 0.67
ARFGAP3-204ENST00000453516 BAZ1BQ9UIG0 1483 aaKnown RBP19.2■□□□□ 0.66
ARFGAP3-204ENST00000453516 WIZO95785 1651 aa19.18■□□□□ 0.66
ARFGAP3-204ENST00000453516 RSF1Q96T23 1441 aaPredicted RBP19.14■□□□□ 0.65
ARFGAP3-204ENST00000453516 TOP2AP11388 1531 aaKnown RBP18.96■□□□□ 0.63
ARFGAP3-204ENST00000453516 NESP48681 1621 aa18.84■□□□□ 0.61
ARFGAP3-204ENST00000453516 SUPT5HO00267 1087 aaKnown RBP18.79■□□□□ 0.6
ARFGAP3-204ENST00000453516 LAMC3Q9Y6N6 1575 aa18.78■□□□□ 0.6
ARFGAP3-204ENST00000453516 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
ARFGAP3-204ENST00000453516 CCDC88BA6NC98 1476 aa18.71■□□□□ 0.59
ARFGAP3-204ENST00000453516 CADPSQ9ULU8 1353 aa18.71■□□□□ 0.59
ARFGAP3-204ENST00000453516 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
ARFGAP3-204ENST00000453516 PDS5BQ9NTI5 1447 aa18.64■□□□□ 0.57
ARFGAP3-204ENST00000453516 CFTRP13569 1480 aa18.63■□□□□ 0.57
ARFGAP3-204ENST00000453516 PLPPR3Q6T4P5 718 aa18.59■□□□□ 0.57
ARFGAP3-204ENST00000453516 PRDM2Q13029 1718 aa18.58■□□□□ 0.57
ARFGAP3-204ENST00000453516 FANCD2Q9BXW9 1451 aa18.54■□□□□ 0.56
ARFGAP3-204ENST00000453516 THOC2Q8NI27 1593 aaKnown RBP18.54■□□□□ 0.56
ARFGAP3-204ENST00000453516 CEP164Q9UPV0 1460 aa18.52■□□□□ 0.56
ARFGAP3-204ENST00000453516 MRC2Q9UBG0 1479 aa18.47■□□□□ 0.55
ARFGAP3-204ENST00000453516 CUX2O14529 1486 aa18.46■□□□□ 0.55
ARFGAP3-204ENST00000453516 WDR62O43379 1518 aa18.39■□□□□ 0.54
ARFGAP3-204ENST00000453516 URB2Q14146 1524 aaKnown RBP18.36■□□□□ 0.53
ARFGAP3-204ENST00000453516 TOPBP1Q92547 1522 aa18.26■□□□□ 0.51
ARFGAP3-204ENST00000453516 DNMBPQ6XZF7 1577 aa18.25■□□□□ 0.51
ARFGAP3-204ENST00000453516 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
ARFGAP3-204ENST00000453516 CUX1P39880 1505 aa18.16■□□□□ 0.5
ARFGAP3-204ENST00000453516 MSH5O43196 834 aa18.13■□□□□ 0.49
ARFGAP3-204ENST00000453516 PIAS4Q8N2W9 510 aaPredicted RBP18.11■□□□□ 0.49
ARFGAP3-204ENST00000453516 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
ARFGAP3-204ENST00000453516 IFT140Q96RY7 1462 aa18.11■□□□□ 0.49
ARFGAP3-204ENST00000453516 FGD5Q6ZNL6 1462 aa18.1■□□□□ 0.49
ARFGAP3-204ENST00000453516 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
ARFGAP3-204ENST00000453516 SYNJ1O43426 1573 aa18.05■□□□□ 0.48
ARFGAP3-204ENST00000453516 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
ARFGAP3-204ENST00000453516 RAD54L2Q9Y4B4 1467 aa18.04■□□□□ 0.48
ARFGAP3-204ENST00000453516 PPP6R1Q9UPN7 881 aa18.04■□□□□ 0.48
ARFGAP3-204ENST00000453516 BIVM-ERCC5R4GMW8 1640 aa18.04■□□□□ 0.48
ARFGAP3-204ENST00000453516 ZNF608Q9ULD9 1512 aaPredicted RBP18.03■□□□□ 0.48
ARFGAP3-204ENST00000453516 ADRA2BP18089 450 aa18.03■□□□□ 0.48
ARFGAP3-204ENST00000453516 TOP2BQ02880 1626 aa18.02■□□□□ 0.48
ARFGAP3-204ENST00000453516 SOGA1O94964 1423 aa18.02■□□□□ 0.48
ARFGAP3-204ENST00000453516 EIF4G3O43432 1585 aaKnown RBP18■□□□□ 0.47
ARFGAP3-204ENST00000453516 WDR97A6NE52 1622 aa17.95■□□□□ 0.46
ARFGAP3-204ENST00000453516 AQRO60306 1485 aaKnown RBP eCLIP17.94■□□□□ 0.46
ARFGAP3-204ENST00000453516 TDRD9Q8NDG6 1382 aaKnown RBP17.92■□□□□ 0.46
ARFGAP3-204ENST00000453516 ABCA10Q8WWZ4 1543 aa17.88■□□□□ 0.45
ARFGAP3-204ENST00000453516 PBRM1Q86U86 1689 aa17.84■□□□□ 0.45
ARFGAP3-204ENST00000453516 ABCA5Q8WWZ7 1642 aa17.83■□□□□ 0.45
ARFGAP3-204ENST00000453516 GAPVD1Q14C86 1478 aa17.83■□□□□ 0.45
ARFGAP3-204ENST00000453516 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
ARFGAP3-204ENST00000453516 SNAPC4Q5SXM2 1469 aa17.8■□□□□ 0.44
ARFGAP3-204ENST00000453516 CHD1O14646 1710 aa17.78■□□□□ 0.44
ARFGAP3-204ENST00000453516 DNAJC5Q9H3Z4 198 aa17.75■□□□□ 0.43
ARFGAP3-204ENST00000453516 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
ARFGAP3-204ENST00000453516 FBLN2P98095 1184 aa17.73■□□□□ 0.43
ARFGAP3-204ENST00000453516 OSCARQ8IYS5 282 aa17.7■□□□□ 0.42
ARFGAP3-204ENST00000453516 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
ARFGAP3-204ENST00000453516 ERICH3Q5RHP9 1530 aa17.68■□□□□ 0.42
ARFGAP3-204ENST00000453516 ADAMTS12P58397 1594 aa17.68■□□□□ 0.42
ARFGAP3-204ENST00000453516 KIF27Q86VH2 1401 aa17.68■□□□□ 0.42
ARFGAP3-204ENST00000453516 SYNJ2O15056 1496 aa17.68■□□□□ 0.42
ARFGAP3-204ENST00000453516 CHMP7Q8WUX9 453 aaPredicted RBP17.67■□□□□ 0.42
ARFGAP3-204ENST00000453516 FHAD1B1AJZ9 1412 aa17.62■□□□□ 0.41
ARFGAP3-204ENST00000453516 GRIN2AQ12879 1464 aa17.58■□□□□ 0.41
ARFGAP3-204ENST00000453516 CUL7Q14999 1698 aa17.58■□□□□ 0.4
ARFGAP3-204ENST00000453516 RUSC2Q8N2Y8 1516 aa17.57■□□□□ 0.4
ARFGAP3-204ENST00000453516 IGF1RP08069 1367 aa17.55■□□□□ 0.4
ARFGAP3-204ENST00000453516 CLASP1Q7Z460 1538 aa17.52■□□□□ 0.4
ARFGAP3-204ENST00000453516 CEP170Q5SW79 1584 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms