RNA–Protein interactions for RNA: ENST00000453470.2

LINC00297-201, long intergenic non-protein coding RNA 297, humanhuman

TSL 2 BASIC

Gene LINC00297, Length 913 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00297-201ENST00000453470 AEBP2Q6ZN18 517 aaPredicted RBP23.4■■□□□ 1.34
LINC00297-201ENST00000453470 CHIC1Q5VXU3 224 aa22.86■■□□□ 1.25
LINC00297-201ENST00000453470 NISCHQ9Y2I1 1504 aa22.47■■□□□ 1.19
LINC00297-201ENST00000453470 ABCC9O60706 1549 aa20.34■□□□□ 0.85
LINC00297-201ENST00000453470 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
LINC00297-201ENST00000453470 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
LINC00297-201ENST00000453470 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
LINC00297-201ENST00000453470 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
LINC00297-201ENST00000453470 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
LINC00297-201ENST00000453470 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
LINC00297-201ENST00000453470 NACADO15069 1562 aa19.13■□□□□ 0.65
LINC00297-201ENST00000453470 PABPN1Q86U42 306 aaKnown RBP eCLIP19.08■□□□□ 0.64
LINC00297-201ENST00000453470 MYO15BQ96JP2 1530 aa18.83■□□□□ 0.6
LINC00297-201ENST00000453470 BICRAQ9NZM4 1560 aa18.62■□□□□ 0.57
LINC00297-201ENST00000453470 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
LINC00297-201ENST00000453470 UNC13AQ9UPW8 1703 aa18.57■□□□□ 0.56
LINC00297-201ENST00000453470 DCAF1Q9Y4B6 1507 aa18.53■□□□□ 0.56
LINC00297-201ENST00000453470 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.55
LINC00297-201ENST00000453470 SHROOM4Q9ULL8 1493 aa18.44■□□□□ 0.54
LINC00297-201ENST00000453470 FOXD1Q16676 465 aa18.41■□□□□ 0.54
LINC00297-201ENST00000453470 CECR2Q9BXF3 1484 aa18.36■□□□□ 0.53
LINC00297-201ENST00000453470 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
LINC00297-201ENST00000453470 CC2D2AQ9P2K1 1620 aa18.28■□□□□ 0.52
LINC00297-201ENST00000453470 EIF4G1Q04637 1599 aaKnown RBP18.22■□□□□ 0.51
LINC00297-201ENST00000453470 DNAJC5Q9H3Z4 198 aa17.9■□□□□ 0.46
LINC00297-201ENST00000453470 PPP6R1Q9UPN7 881 aa17.8■□□□□ 0.44
LINC00297-201ENST00000453470 ADRA2BP18089 450 aa17.77■□□□□ 0.44
LINC00297-201ENST00000453470 NCAPD3P42695 1498 aa17.74■□□□□ 0.43
LINC00297-201ENST00000453470 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
LINC00297-201ENST00000453470 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
LINC00297-201ENST00000453470 CUX2O14529 1486 aa17.58■□□□□ 0.41
LINC00297-201ENST00000453470 SMARCA2P51531 1590 aa17.53■□□□□ 0.4
LINC00297-201ENST00000453470 HMGXB3Q12766 1538 aa17.45■□□□□ 0.38
LINC00297-201ENST00000453470 SMARCA4P51532 1647 aa17.44■□□□□ 0.38
LINC00297-201ENST00000453470 BAZ1BQ9UIG0 1483 aaKnown RBP17.44■□□□□ 0.38
LINC00297-201ENST00000453470 BAZ1AQ9NRL2 1556 aaPredicted RBP17.42■□□□□ 0.38
LINC00297-201ENST00000453470 NESP48681 1621 aa17.39■□□□□ 0.38
LINC00297-201ENST00000453470 PIAS4Q8N2W9 510 aaPredicted RBP17.34■□□□□ 0.37
LINC00297-201ENST00000453470 PDS5BQ9NTI5 1447 aa17.32■□□□□ 0.36
LINC00297-201ENST00000453470 PEG3Q9GZU2 1588 aa17.29■□□□□ 0.36
LINC00297-201ENST00000453470 MROH2BQ7Z745 1585 aa17.28■□□□□ 0.36
LINC00297-201ENST00000453470 CADPSQ9ULU8 1353 aa17.25■□□□□ 0.35
LINC00297-201ENST00000453470 LAMC3Q9Y6N6 1575 aa17.24■□□□□ 0.35
LINC00297-201ENST00000453470 THOC2Q8NI27 1593 aaKnown RBP17.09■□□□□ 0.33
LINC00297-201ENST00000453470 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
LINC00297-201ENST00000453470 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
LINC00297-201ENST00000453470 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
LINC00297-201ENST00000453470 KIF21AQ7Z4S6 1674 aa17■□□□□ 0.31
LINC00297-201ENST00000453470 WIZO95785 1651 aa16.98■□□□□ 0.31
LINC00297-201ENST00000453470 CEP164Q9UPV0 1460 aa16.97■□□□□ 0.31
LINC00297-201ENST00000453470 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.31
LINC00297-201ENST00000453470 FANCD2Q9BXW9 1451 aa16.96■□□□□ 0.31
LINC00297-201ENST00000453470 CFTRP13569 1480 aa16.94■□□□□ 0.3
LINC00297-201ENST00000453470 WDR62O43379 1518 aa16.94■□□□□ 0.3
LINC00297-201ENST00000453470 MSH5O43196 834 aa16.89■□□□□ 0.29
LINC00297-201ENST00000453470 TOP2AP11388 1531 aaKnown RBP16.8■□□□□ 0.28
LINC00297-201ENST00000453470 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
LINC00297-201ENST00000453470 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
LINC00297-201ENST00000453470 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
LINC00297-201ENST00000453470 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
LINC00297-201ENST00000453470 FBLN2P98095 1184 aa16.6■□□□□ 0.25
LINC00297-201ENST00000453470 CYB5RLQ6IPT4 315 aa16.6■□□□□ 0.25
LINC00297-201ENST00000453470 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
LINC00297-201ENST00000453470 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
LINC00297-201ENST00000453470 AQRO60306 1485 aaKnown RBP eCLIP16.52■□□□□ 0.23
LINC00297-201ENST00000453470 SOGA1O94964 1423 aa16.47■□□□□ 0.23
LINC00297-201ENST00000453470 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
LINC00297-201ENST00000453470 TRHP20396 242 aaPredicted RBP16.46■□□□□ 0.23
LINC00297-201ENST00000453470 CHMP7Q8WUX9 453 aaPredicted RBP16.46■□□□□ 0.23
LINC00297-201ENST00000453470 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
LINC00297-201ENST00000453470 ARHGEF11O15085 1522 aa16.45■□□□□ 0.22
LINC00297-201ENST00000453470 TDRD9Q8NDG6 1382 aaKnown RBP16.44■□□□□ 0.22
LINC00297-201ENST00000453470 RIMBP3CA6NJZ7 1639 aa16.44■□□□□ 0.22
LINC00297-201ENST00000453470 RIMBP3BA6NNM3 1639 aa16.44■□□□□ 0.22
LINC00297-201ENST00000453470 RIMBP3Q9UFD9 1639 aa16.44■□□□□ 0.22
LINC00297-201ENST00000453470 PPP4R3CPQ6ZMV5 832 aa16.41■□□□□ 0.22
LINC00297-201ENST00000453470 POLA1P09884 1462 aaPredicted RBP16.41■□□□□ 0.22
LINC00297-201ENST00000453470 RAD54L2Q9Y4B4 1467 aa16.39■□□□□ 0.21
LINC00297-201ENST00000453470 EIF4G3O43432 1585 aaKnown RBP16.36■□□□□ 0.21
LINC00297-201ENST00000453470 TARBP1Q13395 1621 aaKnown RBP16.36■□□□□ 0.21
LINC00297-201ENST00000453470 SUPT5HO00267 1087 aaKnown RBP16.3■□□□□ 0.2
LINC00297-201ENST00000453470 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
LINC00297-201ENST00000453470 GRIN2BQ13224 1484 aa16.27■□□□□ 0.19
LINC00297-201ENST00000453470 ARAP1Q96P48 1450 aa16.27■□□□□ 0.19
LINC00297-201ENST00000453470 SNAPC4Q5SXM2 1469 aa16.26■□□□□ 0.19
LINC00297-201ENST00000453470 MAGI1Q96QZ7 1491 aaPredicted RBP16.24■□□□□ 0.19
LINC00297-201ENST00000453470 CUX1P39880 1505 aa16.22■□□□□ 0.19
LINC00297-201ENST00000453470 CHD1O14646 1710 aa16.22■□□□□ 0.19
LINC00297-201ENST00000453470 WDR97A6NE52 1622 aa16.21■□□□□ 0.19
LINC00297-201ENST00000453470 SYNJ2O15056 1496 aa16.21■□□□□ 0.19
LINC00297-201ENST00000453470 GAPVD1Q14C86 1478 aa16.21■□□□□ 0.19
LINC00297-201ENST00000453470 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
LINC00297-201ENST00000453470 SYNJ1O43426 1573 aa16.17■□□□□ 0.18
LINC00297-201ENST00000453470 MAPK8IP2Q13387 824 aaPredicted RBP16.14■□□□□ 0.17
LINC00297-201ENST00000453470 WRNQ14191 1432 aaPredicted RBP eCLIP16.13■□□□□ 0.17
LINC00297-201ENST00000453470 CLASP1Q7Z460 1538 aa16.13■□□□□ 0.17
LINC00297-201ENST00000453470 ABCA10Q8WWZ4 1543 aa16.12■□□□□ 0.17
LINC00297-201ENST00000453470 KCNA4P22459 653 aa16.1■□□□□ 0.17
LINC00297-201ENST00000453470 JPH4Q96JJ6 628 aa16.04■□□□□ 0.16
LINC00297-201ENST00000453470 FHAD1B1AJZ9 1412 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms