RNA–Protein interactions for RNA: ENST00000453333.1

SEMA3E-204, Transcript of semaphorin 3E, humanhuman

TSL 3

Gene SEMA3E, Length 571 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3E-204ENST00000453333 NISCHQ9Y2I1 1504 aa22.46■■□□□ 1.19
SEMA3E-204ENST00000453333 AEBP2Q6ZN18 517 aaPredicted RBP20.19■□□□□ 0.82
SEMA3E-204ENST00000453333 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
SEMA3E-204ENST00000453333 ABCC9O60706 1549 aa19.28■□□□□ 0.68
SEMA3E-204ENST00000453333 CHIC1Q5VXU3 224 aa19.17■□□□□ 0.66
SEMA3E-204ENST00000453333 MYO15BQ96JP2 1530 aa18.83■□□□□ 0.6
SEMA3E-204ENST00000453333 NACADO15069 1562 aa18.81■□□□□ 0.6
SEMA3E-204ENST00000453333 RB1CC1Q8TDY2 1594 aa18.77■□□□□ 0.6
SEMA3E-204ENST00000453333 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
SEMA3E-204ENST00000453333 ZCCHC6Q5VYS8 1495 aaKnown RBP18.72■□□□□ 0.59
SEMA3E-204ENST00000453333 DCAF8L2P0C7V8 631 aa18.6■□□□□ 0.57
SEMA3E-204ENST00000453333 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
SEMA3E-204ENST00000453333 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
SEMA3E-204ENST00000453333 SCRIBQ14160 1630 aa18.05■□□□□ 0.48
SEMA3E-204ENST00000453333 BICRAQ9NZM4 1560 aa18.04■□□□□ 0.48
SEMA3E-204ENST00000453333 PABPN1Q86U42 306 aaKnown RBP eCLIP17.99■□□□□ 0.47
SEMA3E-204ENST00000453333 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
SEMA3E-204ENST00000453333 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
SEMA3E-204ENST00000453333 CC2D2AQ9P2K1 1620 aa17.48■□□□□ 0.39
SEMA3E-204ENST00000453333 BAZ1AQ9NRL2 1556 aaPredicted RBP17.46■□□□□ 0.39
SEMA3E-204ENST00000453333 CECR2Q9BXF3 1484 aa17.41■□□□□ 0.38
SEMA3E-204ENST00000453333 SMARCA2P51531 1590 aa17.36■□□□□ 0.37
SEMA3E-204ENST00000453333 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
SEMA3E-204ENST00000453333 NCAPD3P42695 1498 aa17.33■□□□□ 0.37
SEMA3E-204ENST00000453333 PEG3Q9GZU2 1588 aa17.3■□□□□ 0.36
SEMA3E-204ENST00000453333 ATAD2BQ9ULI0 1458 aa17.28■□□□□ 0.36
SEMA3E-204ENST00000453333 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
SEMA3E-204ENST00000453333 MROH2BQ7Z745 1585 aa17.2■□□□□ 0.34
SEMA3E-204ENST00000453333 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
SEMA3E-204ENST00000453333 BAZ1BQ9UIG0 1483 aaKnown RBP17.17■□□□□ 0.34
SEMA3E-204ENST00000453333 RSF1Q96T23 1441 aaPredicted RBP17.11■□□□□ 0.33
SEMA3E-204ENST00000453333 PHF23Q9BUL5 403 aaPredicted RBP17■□□□□ 0.31
SEMA3E-204ENST00000453333 WIZO95785 1651 aa16.97■□□□□ 0.31
SEMA3E-204ENST00000453333 TOP2AP11388 1531 aaKnown RBP16.96■□□□□ 0.3
SEMA3E-204ENST00000453333 LAMC3Q9Y6N6 1575 aa16.85■□□□□ 0.29
SEMA3E-204ENST00000453333 CADPSQ9ULU8 1353 aa16.81■□□□□ 0.28
SEMA3E-204ENST00000453333 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
SEMA3E-204ENST00000453333 ERCC6Q03468 1493 aa16.73■□□□□ 0.27
SEMA3E-204ENST00000453333 CFTRP13569 1480 aa16.73■□□□□ 0.27
SEMA3E-204ENST00000453333 CCDC88BA6NC98 1476 aa16.69■□□□□ 0.26
SEMA3E-204ENST00000453333 NESP48681 1621 aa16.66■□□□□ 0.26
SEMA3E-204ENST00000453333 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
SEMA3E-204ENST00000453333 CUX2O14529 1486 aa16.61■□□□□ 0.25
SEMA3E-204ENST00000453333 FANCD2Q9BXW9 1451 aa16.57■□□□□ 0.24
SEMA3E-204ENST00000453333 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
SEMA3E-204ENST00000453333 MRC2Q9UBG0 1479 aa16.53■□□□□ 0.24
SEMA3E-204ENST00000453333 PRDM2Q13029 1718 aa16.53■□□□□ 0.24
SEMA3E-204ENST00000453333 ABCC8Q09428 1581 aa16.5■□□□□ 0.23
SEMA3E-204ENST00000453333 THOC2Q8NI27 1593 aaKnown RBP16.47■□□□□ 0.23
SEMA3E-204ENST00000453333 KIF21AQ7Z4S6 1674 aa16.47■□□□□ 0.23
SEMA3E-204ENST00000453333 WDR62O43379 1518 aa16.45■□□□□ 0.22
SEMA3E-204ENST00000453333 URB2Q14146 1524 aaKnown RBP16.33■□□□□ 0.2
SEMA3E-204ENST00000453333 DNMBPQ6XZF7 1577 aa16.32■□□□□ 0.2
SEMA3E-204ENST00000453333 TOPBP1Q92547 1522 aa16.29■□□□□ 0.2
SEMA3E-204ENST00000453333 IFT140Q96RY7 1462 aa16.27■□□□□ 0.19
SEMA3E-204ENST00000453333 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
SEMA3E-204ENST00000453333 WRNQ14191 1432 aaPredicted RBP eCLIP16.18■□□□□ 0.18
SEMA3E-204ENST00000453333 POLA1P09884 1462 aaPredicted RBP16.16■□□□□ 0.18
SEMA3E-204ENST00000453333 CUX1P39880 1505 aa16.15■□□□□ 0.18
SEMA3E-204ENST00000453333 SOGA1O94964 1423 aa16.13■□□□□ 0.17
SEMA3E-204ENST00000453333 FGD5Q6ZNL6 1462 aa16.11■□□□□ 0.17
SEMA3E-204ENST00000453333 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
SEMA3E-204ENST00000453333 BIVM-ERCC5R4GMW8 1640 aa16.08■□□□□ 0.17
SEMA3E-204ENST00000453333 TARBP1Q13395 1621 aaKnown RBP16.08■□□□□ 0.16
SEMA3E-204ENST00000453333 ABCA10Q8WWZ4 1543 aa16.05■□□□□ 0.16
SEMA3E-204ENST00000453333 FOXD1Q16676 465 aa16.05■□□□□ 0.16
SEMA3E-204ENST00000453333 SYNJ1O43426 1573 aa16■□□□□ 0.15
SEMA3E-204ENST00000453333 ZNF608Q9ULD9 1512 aaPredicted RBP15.99■□□□□ 0.15
SEMA3E-204ENST00000453333 RAD54L2Q9Y4B4 1467 aa15.99■□□□□ 0.15
SEMA3E-204ENST00000453333 EIF4G3O43432 1585 aaKnown RBP15.99■□□□□ 0.15
SEMA3E-204ENST00000453333 GRIN2BQ13224 1484 aa15.98■□□□□ 0.15
SEMA3E-204ENST00000453333 MAGI1Q96QZ7 1491 aaPredicted RBP15.96■□□□□ 0.14
SEMA3E-204ENST00000453333 TDRD9Q8NDG6 1382 aaKnown RBP15.95■□□□□ 0.14
SEMA3E-204ENST00000453333 AQRO60306 1485 aaKnown RBP eCLIP15.95■□□□□ 0.14
SEMA3E-204ENST00000453333 GAPVD1Q14C86 1478 aa15.95■□□□□ 0.14
SEMA3E-204ENST00000453333 OSCARQ8IYS5 282 aa15.92■□□□□ 0.14
SEMA3E-204ENST00000453333 DNAJC5Q9H3Z4 198 aa15.92■□□□□ 0.14
SEMA3E-204ENST00000453333 ABCA5Q8WWZ7 1642 aa15.9■□□□□ 0.14
SEMA3E-204ENST00000453333 ERICH3Q5RHP9 1530 aa15.89■□□□□ 0.13
SEMA3E-204ENST00000453333 KIF27Q86VH2 1401 aa15.89■□□□□ 0.13
SEMA3E-204ENST00000453333 SYNJ2O15056 1496 aa15.85■□□□□ 0.13
SEMA3E-204ENST00000453333 TRIM41Q8WV44 630 aa15.85■□□□□ 0.13
SEMA3E-204ENST00000453333 SNAPC4Q5SXM2 1469 aa15.84■□□□□ 0.13
SEMA3E-204ENST00000453333 CHMP7Q8WUX9 453 aaPredicted RBP15.84■□□□□ 0.13
SEMA3E-204ENST00000453333 FHAD1B1AJZ9 1412 aa15.83■□□□□ 0.12
SEMA3E-204ENST00000453333 PBRM1Q86U86 1689 aa15.8■□□□□ 0.12
SEMA3E-204ENST00000453333 FBLN2P98095 1184 aa15.77■□□□□ 0.12
SEMA3E-204ENST00000453333 EEA1Q15075 1411 aa15.75■□□□□ 0.11
SEMA3E-204ENST00000453333 ADAMTS12P58397 1594 aa15.75■□□□□ 0.11
SEMA3E-204ENST00000453333 CUL7Q14999 1698 aa15.74■□□□□ 0.11
SEMA3E-204ENST00000453333 IGF1RP08069 1367 aa15.74■□□□□ 0.11
SEMA3E-204ENST00000453333 GRIN2AQ12879 1464 aa15.72■□□□□ 0.11
SEMA3E-204ENST00000453333 CHD1O14646 1710 aa15.7■□□□□ 0.1
SEMA3E-204ENST00000453333 NUP160Q12769 1436 aa15.68■□□□□ 0.1
SEMA3E-204ENST00000453333 CARMIL1Q5VZK9 1371 aa15.67■□□□□ 0.1
SEMA3E-204ENST00000453333 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
SEMA3E-204ENST00000453333 RAPGEF2Q9Y4G8 1499 aa15.6■□□□□ 0.09
SEMA3E-204ENST00000453333 KIAA0586Q9BVV6 1533 aa15.58■□□□□ 0.09
SEMA3E-204ENST00000453333 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
SEMA3E-204ENST00000453333 CEP170Q5SW79 1584 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms