RNA–Protein interactions for RNA: ENST00000453171.5

KRTCAP3-204, Transcript of keratinocyte associated protein 3, humanhuman

TSL 3

Gene KRTCAP3, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-204ENST00000453171 NISCHQ9Y2I1 1504 aa28.86■■■□□ 2.21
KRTCAP3-204ENST00000453171 CCDC180Q9P1Z9 1646 aa25.65■■□□□ 1.7
KRTCAP3-204ENST00000453171 ABCC9O60706 1549 aa24.86■■□□□ 1.57
KRTCAP3-204ENST00000453171 ZCCHC6Q5VYS8 1495 aaKnown RBP24.09■■□□□ 1.45
KRTCAP3-204ENST00000453171 NACADO15069 1562 aa24.03■■□□□ 1.44
KRTCAP3-204ENST00000453171 RB1CC1Q8TDY2 1594 aa24.02■■□□□ 1.44
KRTCAP3-204ENST00000453171 MYO15BQ96JP2 1530 aa23.95■■□□□ 1.43
KRTCAP3-204ENST00000453171 DCAF1Q9Y4B6 1507 aa23.91■■□□□ 1.42
KRTCAP3-204ENST00000453171 DCAF8L2P0C7V8 631 aa23.9■■□□□ 1.42
KRTCAP3-204ENST00000453171 UNC13AQ9UPW8 1703 aa23.58■■□□□ 1.37
KRTCAP3-204ENST00000453171 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
KRTCAP3-204ENST00000453171 BICRAQ9NZM4 1560 aa23.33■■□□□ 1.33
KRTCAP3-204ENST00000453171 PABPN1Q86U42 306 aaKnown RBP eCLIP23.21■■□□□ 1.31
KRTCAP3-204ENST00000453171 SHROOM4Q9ULL8 1493 aa23.08■■□□□ 1.29
KRTCAP3-204ENST00000453171 EIF4G1Q04637 1599 aaKnown RBP22.67■■□□□ 1.22
KRTCAP3-204ENST00000453171 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
KRTCAP3-204ENST00000453171 CC2D2AQ9P2K1 1620 aa22.54■■□□□ 1.2
KRTCAP3-204ENST00000453171 CECR2Q9BXF3 1484 aa22.46■■□□□ 1.19
KRTCAP3-204ENST00000453171 SMARCA4P51532 1647 aa22.39■■□□□ 1.17
KRTCAP3-204ENST00000453171 BAZ1AQ9NRL2 1556 aaPredicted RBP22.36■■□□□ 1.17
KRTCAP3-204ENST00000453171 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
KRTCAP3-204ENST00000453171 ATAD2BQ9ULI0 1458 aa22.19■■□□□ 1.14
KRTCAP3-204ENST00000453171 SMARCA2P51531 1590 aa22.18■■□□□ 1.14
KRTCAP3-204ENST00000453171 PEG3Q9GZU2 1588 aa22.18■■□□□ 1.14
KRTCAP3-204ENST00000453171 NCAPD3P42695 1498 aa22.15■■□□□ 1.14
KRTCAP3-204ENST00000453171 HMGXB3Q12766 1538 aa22.1■■□□□ 1.13
KRTCAP3-204ENST00000453171 WIZO95785 1651 aa22.03■■□□□ 1.12
KRTCAP3-204ENST00000453171 RSF1Q96T23 1441 aaPredicted RBP22.03■■□□□ 1.12
KRTCAP3-204ENST00000453171 BAZ1BQ9UIG0 1483 aaKnown RBP22.01■■□□□ 1.11
KRTCAP3-204ENST00000453171 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
KRTCAP3-204ENST00000453171 NESP48681 1621 aa21.58■■□□□ 1.05
KRTCAP3-204ENST00000453171 LAMC3Q9Y6N6 1575 aa21.57■■□□□ 1.04
KRTCAP3-204ENST00000453171 CCDC88BA6NC98 1476 aa21.51■■□□□ 1.03
KRTCAP3-204ENST00000453171 CADPSQ9ULU8 1353 aa21.49■■□□□ 1.03
KRTCAP3-204ENST00000453171 SUPT5HO00267 1087 aaKnown RBP21.48■■□□□ 1.03
KRTCAP3-204ENST00000453171 CFTRP13569 1480 aa21.43■■□□□ 1.02
KRTCAP3-204ENST00000453171 ERCC6Q03468 1493 aa21.4■■□□□ 1.02
KRTCAP3-204ENST00000453171 KIF21AQ7Z4S6 1674 aa21.39■■□□□ 1.01
KRTCAP3-204ENST00000453171 PRDM2Q13029 1718 aa21.38■■□□□ 1.01
KRTCAP3-204ENST00000453171 PDS5BQ9NTI5 1447 aa21.37■■□□□ 1.01
KRTCAP3-204ENST00000453171 THOC2Q8NI27 1593 aaKnown RBP21.28■■□□□ 1
KRTCAP3-204ENST00000453171 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
KRTCAP3-204ENST00000453171 CEP164Q9UPV0 1460 aa21.23■□□□□ 0.99
KRTCAP3-204ENST00000453171 MRC2Q9UBG0 1479 aa21.17■□□□□ 0.98
KRTCAP3-204ENST00000453171 CUX2O14529 1486 aa21.16■□□□□ 0.98
KRTCAP3-204ENST00000453171 WDR62O43379 1518 aa21.13■□□□□ 0.97
KRTCAP3-204ENST00000453171 URB2Q14146 1524 aaKnown RBP21.06■□□□□ 0.96
KRTCAP3-204ENST00000453171 TOPBP1Q92547 1522 aa20.96■□□□□ 0.95
KRTCAP3-204ENST00000453171 DNMBPQ6XZF7 1577 aa20.96■□□□□ 0.95
KRTCAP3-204ENST00000453171 ABCC8Q09428 1581 aa20.94■□□□□ 0.94
KRTCAP3-204ENST00000453171 CUX1P39880 1505 aa20.87■□□□□ 0.93
KRTCAP3-204ENST00000453171 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
KRTCAP3-204ENST00000453171 IFT140Q96RY7 1462 aa20.77■□□□□ 0.92
KRTCAP3-204ENST00000453171 FGD5Q6ZNL6 1462 aa20.75■□□□□ 0.91
KRTCAP3-204ENST00000453171 TARBP1Q13395 1621 aaKnown RBP20.75■□□□□ 0.91
KRTCAP3-204ENST00000453171 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
KRTCAP3-204ENST00000453171 WRNQ14191 1432 aaPredicted RBP eCLIP20.75■□□□□ 0.91
KRTCAP3-204ENST00000453171 SYNJ1O43426 1573 aa20.74■□□□□ 0.91
KRTCAP3-204ENST00000453171 TOP2BQ02880 1626 aa20.74■□□□□ 0.91
KRTCAP3-204ENST00000453171 RAD54L2Q9Y4B4 1467 aa20.68■□□□□ 0.9
KRTCAP3-204ENST00000453171 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
KRTCAP3-204ENST00000453171 SOGA1O94964 1423 aa20.66■□□□□ 0.9
KRTCAP3-204ENST00000453171 WDR97A6NE52 1622 aa20.66■□□□□ 0.9
KRTCAP3-204ENST00000453171 EIF4G3O43432 1585 aaKnown RBP20.64■□□□□ 0.9
KRTCAP3-204ENST00000453171 ABCA10Q8WWZ4 1543 aa20.57■□□□□ 0.88
KRTCAP3-204ENST00000453171 AQRO60306 1485 aaKnown RBP eCLIP20.55■□□□□ 0.88
KRTCAP3-204ENST00000453171 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
KRTCAP3-204ENST00000453171 ABCA5Q8WWZ7 1642 aa20.51■□□□□ 0.87
KRTCAP3-204ENST00000453171 PBRM1Q86U86 1689 aa20.47■□□□□ 0.87
KRTCAP3-204ENST00000453171 GAPVD1Q14C86 1478 aa20.44■□□□□ 0.86
KRTCAP3-204ENST00000453171 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
KRTCAP3-204ENST00000453171 SNAPC4Q5SXM2 1469 aa20.39■□□□□ 0.85
KRTCAP3-204ENST00000453171 CHD1O14646 1710 aa20.38■□□□□ 0.85
KRTCAP3-204ENST00000453171 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
KRTCAP3-204ENST00000453171 ERICH3Q5RHP9 1530 aa20.32■□□□□ 0.84
KRTCAP3-204ENST00000453171 ADAMTS12P58397 1594 aa20.29■□□□□ 0.84
KRTCAP3-204ENST00000453171 KIF27Q86VH2 1401 aa20.29■□□□□ 0.84
KRTCAP3-204ENST00000453171 TRIM41Q8WV44 630 aa20.29■□□□□ 0.84
KRTCAP3-204ENST00000453171 DNAJC5Q9H3Z4 198 aa20.29■□□□□ 0.84
KRTCAP3-204ENST00000453171 SYNJ2O15056 1496 aa20.29■□□□□ 0.84
KRTCAP3-204ENST00000453171 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
KRTCAP3-204ENST00000453171 FHAD1B1AJZ9 1412 aa20.21■□□□□ 0.83
KRTCAP3-204ENST00000453171 FBLN2P98095 1184 aa20.2■□□□□ 0.82
KRTCAP3-204ENST00000453171 CUL7Q14999 1698 aa20.19■□□□□ 0.82
KRTCAP3-204ENST00000453171 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
KRTCAP3-204ENST00000453171 IGF1RP08069 1367 aa20.19■□□□□ 0.82
KRTCAP3-204ENST00000453171 GRIN2AQ12879 1464 aa20.18■□□□□ 0.82
KRTCAP3-204ENST00000453171 RUSC2Q8N2Y8 1516 aa20.17■□□□□ 0.82
KRTCAP3-204ENST00000453171 CHIC1Q5VXU3 224 aa20.17■□□□□ 0.82
KRTCAP3-204ENST00000453171 CLASP1Q7Z460 1538 aa20.13■□□□□ 0.81
KRTCAP3-204ENST00000453171 CEP170Q5SW79 1584 aa20.1■□□□□ 0.81
KRTCAP3-204ENST00000453171 NUP160Q12769 1436 aa20.1■□□□□ 0.81
KRTCAP3-204ENST00000453171 CARMIL1Q5VZK9 1371 aa20.07■□□□□ 0.8
KRTCAP3-204ENST00000453171 EEA1Q15075 1411 aa20.02■□□□□ 0.79
KRTCAP3-204ENST00000453171 RIMBP3CA6NJZ7 1639 aa19.99■□□□□ 0.79
KRTCAP3-204ENST00000453171 RIMBP3BA6NNM3 1639 aa19.99■□□□□ 0.79
KRTCAP3-204ENST00000453171 RIMBP3Q9UFD9 1639 aa19.99■□□□□ 0.79
KRTCAP3-204ENST00000453171 ARHGEF11O15085 1522 aa19.99■□□□□ 0.79
KRTCAP3-204ENST00000453171 PRXQ9BXM0 1461 aa19.98■□□□□ 0.79
KRTCAP3-204ENST00000453171 RAPGEF2Q9Y4G8 1499 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms