RNA–Protein interactions for RNA: ENST00000452798.1

RPS29P16-201, Transcript of ribosomal protein S29 pseudogene 16, humanhuman

BASIC

Gene RPS29P16, Length 171 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29P16-201ENST00000452798 NISCHQ9Y2I1 1504 aa20.48■□□□□ 0.87
RPS29P16-201ENST00000452798 CCDC180Q9P1Z9 1646 aa18.12■□□□□ 0.49
RPS29P16-201ENST00000452798 ABCC9O60706 1549 aa17.75■□□□□ 0.43
RPS29P16-201ENST00000452798 DCAF8L2P0C7V8 631 aa17.09■□□□□ 0.33
RPS29P16-201ENST00000452798 ZCCHC6Q5VYS8 1495 aaKnown RBP17.07■□□□□ 0.32
RPS29P16-201ENST00000452798 RB1CC1Q8TDY2 1594 aa16.99■□□□□ 0.31
RPS29P16-201ENST00000452798 NACADO15069 1562 aa16.98■□□□□ 0.31
RPS29P16-201ENST00000452798 MYO15BQ96JP2 1530 aa16.87■□□□□ 0.29
RPS29P16-201ENST00000452798 DCAF1Q9Y4B6 1507 aa16.86■□□□□ 0.29
RPS29P16-201ENST00000452798 UNC13AQ9UPW8 1703 aa16.83■□□□□ 0.28
RPS29P16-201ENST00000452798 SCRIBQ14160 1630 aa16.65■□□□□ 0.26
RPS29P16-201ENST00000452798 BICRAQ9NZM4 1560 aa16.64■□□□□ 0.25
RPS29P16-201ENST00000452798 PABPN1Q86U42 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
RPS29P16-201ENST00000452798 DNAJC5BQ9UF47 199 aa16.34■□□□□ 0.21
RPS29P16-201ENST00000452798 SHROOM4Q9ULL8 1493 aa16.34■□□□□ 0.21
RPS29P16-201ENST00000452798 EIF4G1Q04637 1599 aaKnown RBP16.1■□□□□ 0.17
RPS29P16-201ENST00000452798 CC2D2AQ9P2K1 1620 aa16.05■□□□□ 0.16
RPS29P16-201ENST00000452798 CECR2Q9BXF3 1484 aa16.04■□□□□ 0.16
RPS29P16-201ENST00000452798 SMARCA4P51532 1647 aa15.89■□□□□ 0.13
RPS29P16-201ENST00000452798 MROH2BQ7Z745 1585 aa15.86■□□□□ 0.13
RPS29P16-201ENST00000452798 BAZ1AQ9NRL2 1556 aaPredicted RBP15.8■□□□□ 0.12
RPS29P16-201ENST00000452798 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.11
RPS29P16-201ENST00000452798 WIZO95785 1651 aa15.72■□□□□ 0.11
RPS29P16-201ENST00000452798 NCAPD3P42695 1498 aa15.7■□□□□ 0.1
RPS29P16-201ENST00000452798 PEG3Q9GZU2 1588 aa15.68■□□□□ 0.1
RPS29P16-201ENST00000452798 SMARCA2P51531 1590 aa15.67■□□□□ 0.1
RPS29P16-201ENST00000452798 RSF1Q96T23 1441 aaPredicted RBP15.67■□□□□ 0.1
RPS29P16-201ENST00000452798 HMGXB3Q12766 1538 aa15.62■□□□□ 0.09
RPS29P16-201ENST00000452798 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
RPS29P16-201ENST00000452798 NESP48681 1621 aa15.45■□□□□ 0.06
RPS29P16-201ENST00000452798 TOP2AP11388 1531 aaKnown RBP15.44■□□□□ 0.06
RPS29P16-201ENST00000452798 SUPT5HO00267 1087 aaKnown RBP15.35■□□□□ 0.05
RPS29P16-201ENST00000452798 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
RPS29P16-201ENST00000452798 LAMC3Q9Y6N6 1575 aa15.26■□□□□ 0.03
RPS29P16-201ENST00000452798 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
RPS29P16-201ENST00000452798 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
RPS29P16-201ENST00000452798 CFTRP13569 1480 aa15.19■□□□□ 0.02
RPS29P16-201ENST00000452798 ERCC6Q03468 1493 aa15.18■□□□□ 0.02
RPS29P16-201ENST00000452798 PRDM2Q13029 1718 aa15.13■□□□□ 0.01
RPS29P16-201ENST00000452798 THOC2Q8NI27 1593 aaKnown RBP15.13■□□□□ 0.01
RPS29P16-201ENST00000452798 PDS5BQ9NTI5 1447 aa15.1■□□□□ 0.01
RPS29P16-201ENST00000452798 FANCD2Q9BXW9 1451 aa15.1■□□□□ 0.01
RPS29P16-201ENST00000452798 CEP164Q9UPV0 1460 aa15.03■□□□□ -0
RPS29P16-201ENST00000452798 URB2Q14146 1524 aaKnown RBP15.02□□□□□ -0.01
RPS29P16-201ENST00000452798 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
RPS29P16-201ENST00000452798 WDR62O43379 1518 aa14.97□□□□□ -0.01
RPS29P16-201ENST00000452798 CUX2O14529 1486 aa14.96□□□□□ -0.01
RPS29P16-201ENST00000452798 TOPBP1Q92547 1522 aa14.89□□□□□ -0.03
RPS29P16-201ENST00000452798 CUX1P39880 1505 aa14.86□□□□□ -0.03
RPS29P16-201ENST00000452798 ABCC8Q09428 1581 aa14.85□□□□□ -0.03
RPS29P16-201ENST00000452798 DNMBPQ6XZF7 1577 aa14.85□□□□□ -0.03
RPS29P16-201ENST00000452798 POLA1P09884 1462 aaPredicted RBP14.77□□□□□ -0.04
RPS29P16-201ENST00000452798 RAD54L2Q9Y4B4 1467 aa14.77□□□□□ -0.04
RPS29P16-201ENST00000452798 SYNJ1O43426 1573 aa14.77□□□□□ -0.05
RPS29P16-201ENST00000452798 ZNF608Q9ULD9 1512 aaPredicted RBP14.76□□□□□ -0.05
RPS29P16-201ENST00000452798 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
RPS29P16-201ENST00000452798 FGD5Q6ZNL6 1462 aa14.75□□□□□ -0.05
RPS29P16-201ENST00000452798 BIVM-ERCC5R4GMW8 1640 aa14.71□□□□□ -0.05
RPS29P16-201ENST00000452798 WRNQ14191 1432 aaPredicted RBP eCLIP14.7□□□□□ -0.06
RPS29P16-201ENST00000452798 TOP2BQ02880 1626 aa14.7□□□□□ -0.06
RPS29P16-201ENST00000452798 IFT140Q96RY7 1462 aa14.69□□□□□ -0.06
RPS29P16-201ENST00000452798 SOGA1O94964 1423 aa14.68□□□□□ -0.06
RPS29P16-201ENST00000452798 WDR97A6NE52 1622 aa14.67□□□□□ -0.06
RPS29P16-201ENST00000452798 AQRO60306 1485 aaKnown RBP eCLIP14.67□□□□□ -0.06
RPS29P16-201ENST00000452798 EIF4G3O43432 1585 aaKnown RBP14.66□□□□□ -0.06
RPS29P16-201ENST00000452798 TDRD9Q8NDG6 1382 aaKnown RBP14.65□□□□□ -0.06
RPS29P16-201ENST00000452798 ABCA10Q8WWZ4 1543 aa14.57□□□□□ -0.08
RPS29P16-201ENST00000452798 ABCA5Q8WWZ7 1642 aa14.55□□□□□ -0.08
RPS29P16-201ENST00000452798 PBRM1Q86U86 1689 aa14.55□□□□□ -0.08
RPS29P16-201ENST00000452798 CHD1O14646 1710 aa14.52□□□□□ -0.09
RPS29P16-201ENST00000452798 GAPVD1Q14C86 1478 aa14.5□□□□□ -0.09
RPS29P16-201ENST00000452798 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
RPS29P16-201ENST00000452798 DNAJC5Q9H3Z4 198 aa14.49□□□□□ -0.09
RPS29P16-201ENST00000452798 GRIN2BQ13224 1484 aa14.47□□□□□ -0.09
RPS29P16-201ENST00000452798 RUSC2Q8N2Y8 1516 aa14.46□□□□□ -0.1
RPS29P16-201ENST00000452798 FBLN2P98095 1184 aa14.41□□□□□ -0.1
RPS29P16-201ENST00000452798 MAGI1Q96QZ7 1491 aaPredicted RBP14.4□□□□□ -0.1
RPS29P16-201ENST00000452798 TRIM41Q8WV44 630 aa14.4□□□□□ -0.1
RPS29P16-201ENST00000452798 ADAMTS12P58397 1594 aa14.39□□□□□ -0.11
RPS29P16-201ENST00000452798 CHIC1Q5VXU3 224 aa14.39□□□□□ -0.11
RPS29P16-201ENST00000452798 OSCARQ8IYS5 282 aa14.38□□□□□ -0.11
RPS29P16-201ENST00000452798 IGF1RP08069 1367 aa14.37□□□□□ -0.11
RPS29P16-201ENST00000452798 ERICH3Q5RHP9 1530 aa14.37□□□□□ -0.11
RPS29P16-201ENST00000452798 SYNJ2O15056 1496 aa14.37□□□□□ -0.11
RPS29P16-201ENST00000452798 KIF27Q86VH2 1401 aa14.34□□□□□ -0.11
RPS29P16-201ENST00000452798 CHMP7Q8WUX9 453 aaPredicted RBP14.34□□□□□ -0.11
RPS29P16-201ENST00000452798 FHAD1B1AJZ9 1412 aa14.32□□□□□ -0.12
RPS29P16-201ENST00000452798 GRIN2AQ12879 1464 aa14.31□□□□□ -0.12
RPS29P16-201ENST00000452798 CEP170Q5SW79 1584 aa14.31□□□□□ -0.12
RPS29P16-201ENST00000452798 CLASP1Q7Z460 1538 aa14.31□□□□□ -0.12
RPS29P16-201ENST00000452798 CUL7Q14999 1698 aa14.26□□□□□ -0.13
RPS29P16-201ENST00000452798 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
RPS29P16-201ENST00000452798 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
RPS29P16-201ENST00000452798 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
RPS29P16-201ENST00000452798 NUP160Q12769 1436 aa14.24□□□□□ -0.13
RPS29P16-201ENST00000452798 CARMIL1Q5VZK9 1371 aa14.24□□□□□ -0.13
RPS29P16-201ENST00000452798 ERCC6L2Q5T890 1561 aa14.23□□□□□ -0.13
RPS29P16-201ENST00000452798 FAM9AQ8IZU1 332 aaPredicted RBP14.22□□□□□ -0.13
RPS29P16-201ENST00000452798 ARHGEF11O15085 1522 aa14.21□□□□□ -0.13
RPS29P16-201ENST00000452798 PRXQ9BXM0 1461 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms