RNA–Protein interactions for RNA: ENST00000452680.3

HNRNPA1P43-201, Transcript of heterogeneous nuclear ribonucleoprotein A1 pseudogene 43, humanhuman

BASIC

Gene HNRNPA1P43, Length 910 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1P43-201ENST00000452680 AEBP2Q6ZN18 517 aaPredicted RBP20.98■□□□□ 0.95
HNRNPA1P43-201ENST00000452680 NISCHQ9Y2I1 1504 aa20.9■□□□□ 0.94
HNRNPA1P43-201ENST00000452680 CHIC1Q5VXU3 224 aa20.61■□□□□ 0.89
HNRNPA1P43-201ENST00000452680 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
HNRNPA1P43-201ENST00000452680 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
HNRNPA1P43-201ENST00000452680 SENP3Q9H4L4 574 aaPredicted RBP17.96■□□□□ 0.47
HNRNPA1P43-201ENST00000452680 ABCC9O60706 1549 aa17.67■□□□□ 0.42
HNRNPA1P43-201ENST00000452680 ZCCHC6Q5VYS8 1495 aaKnown RBP17.51■□□□□ 0.39
HNRNPA1P43-201ENST00000452680 DCAF1Q9Y4B6 1507 aa17.4■□□□□ 0.38
HNRNPA1P43-201ENST00000452680 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
HNRNPA1P43-201ENST00000452680 NACADO15069 1562 aa17.35■□□□□ 0.37
HNRNPA1P43-201ENST00000452680 RB1CC1Q8TDY2 1594 aa17.31■□□□□ 0.36
HNRNPA1P43-201ENST00000452680 DCAF8L2P0C7V8 631 aa17.23■□□□□ 0.35
HNRNPA1P43-201ENST00000452680 SCRIBQ14160 1630 aa16.88■□□□□ 0.29
HNRNPA1P43-201ENST00000452680 UNC13AQ9UPW8 1703 aa16.87■□□□□ 0.29
HNRNPA1P43-201ENST00000452680 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
HNRNPA1P43-201ENST00000452680 SHROOM4Q9ULL8 1493 aa16.7■□□□□ 0.26
HNRNPA1P43-201ENST00000452680 BICRAQ9NZM4 1560 aa16.61■□□□□ 0.25
HNRNPA1P43-201ENST00000452680 FOXD1Q16676 465 aa16.56■□□□□ 0.24
HNRNPA1P43-201ENST00000452680 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
HNRNPA1P43-201ENST00000452680 BAZ1AQ9NRL2 1556 aaPredicted RBP16.27■□□□□ 0.2
HNRNPA1P43-201ENST00000452680 EIF4G1Q04637 1599 aaKnown RBP16.22■□□□□ 0.19
HNRNPA1P43-201ENST00000452680 SMARCA4P51532 1647 aa16.2■□□□□ 0.18
HNRNPA1P43-201ENST00000452680 CECR2Q9BXF3 1484 aa16.12■□□□□ 0.17
HNRNPA1P43-201ENST00000452680 SMARCA2P51531 1590 aa16.09■□□□□ 0.17
HNRNPA1P43-201ENST00000452680 CC2D2AQ9P2K1 1620 aa16.06■□□□□ 0.16
HNRNPA1P43-201ENST00000452680 MROH2BQ7Z745 1585 aa16.05■□□□□ 0.16
HNRNPA1P43-201ENST00000452680 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
HNRNPA1P43-201ENST00000452680 RSF1Q96T23 1441 aaPredicted RBP15.98■□□□□ 0.15
HNRNPA1P43-201ENST00000452680 HMGXB3Q12766 1538 aa15.97■□□□□ 0.15
HNRNPA1P43-201ENST00000452680 ADRA2BP18089 450 aa15.95■□□□□ 0.14
HNRNPA1P43-201ENST00000452680 ATAD2BQ9ULI0 1458 aa15.95■□□□□ 0.14
HNRNPA1P43-201ENST00000452680 WIZO95785 1651 aa15.95■□□□□ 0.14
HNRNPA1P43-201ENST00000452680 BAZ1BQ9UIG0 1483 aaKnown RBP15.92■□□□□ 0.14
HNRNPA1P43-201ENST00000452680 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
HNRNPA1P43-201ENST00000452680 PPP6R1Q9UPN7 881 aa15.9■□□□□ 0.14
HNRNPA1P43-201ENST00000452680 TOP2AP11388 1531 aaKnown RBP15.88■□□□□ 0.13
HNRNPA1P43-201ENST00000452680 SUPT5HO00267 1087 aaKnown RBP15.8■□□□□ 0.12
HNRNPA1P43-201ENST00000452680 PIAS4Q8N2W9 510 aaPredicted RBP15.72■□□□□ 0.11
HNRNPA1P43-201ENST00000452680 DNAJC5BQ9UF47 199 aa15.67■□□□□ 0.1
HNRNPA1P43-201ENST00000452680 PRDM2Q13029 1718 aa15.58■□□□□ 0.08
HNRNPA1P43-201ENST00000452680 CCDC88BA6NC98 1476 aa15.57■□□□□ 0.08
HNRNPA1P43-201ENST00000452680 LAMC3Q9Y6N6 1575 aa15.54■□□□□ 0.08
HNRNPA1P43-201ENST00000452680 CADPSQ9ULU8 1353 aa15.45■□□□□ 0.06
HNRNPA1P43-201ENST00000452680 CFTRP13569 1480 aa15.45■□□□□ 0.06
HNRNPA1P43-201ENST00000452680 MSH5O43196 834 aa15.39■□□□□ 0.05
HNRNPA1P43-201ENST00000452680 PDS5BQ9NTI5 1447 aa15.39■□□□□ 0.05
HNRNPA1P43-201ENST00000452680 NESP48681 1621 aa15.34■□□□□ 0.05
HNRNPA1P43-201ENST00000452680 ERCC6Q03468 1493 aa15.33■□□□□ 0.05
HNRNPA1P43-201ENST00000452680 CEP164Q9UPV0 1460 aa15.33■□□□□ 0.04
HNRNPA1P43-201ENST00000452680 KIF21AQ7Z4S6 1674 aa15.32■□□□□ 0.04
HNRNPA1P43-201ENST00000452680 FANCD2Q9BXW9 1451 aa15.31■□□□□ 0.04
HNRNPA1P43-201ENST00000452680 ABCC8Q09428 1581 aa15.23■□□□□ 0.03
HNRNPA1P43-201ENST00000452680 MRC2Q9UBG0 1479 aa15.2■□□□□ 0.02
HNRNPA1P43-201ENST00000452680 DNMBPQ6XZF7 1577 aa15.17■□□□□ 0.02
HNRNPA1P43-201ENST00000452680 THOC2Q8NI27 1593 aaKnown RBP15.16■□□□□ 0.02
HNRNPA1P43-201ENST00000452680 WRNQ14191 1432 aaPredicted RBP eCLIP15.15■□□□□ 0.02
HNRNPA1P43-201ENST00000452680 WDR62O43379 1518 aa15.14■□□□□ 0.01
HNRNPA1P43-201ENST00000452680 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
HNRNPA1P43-201ENST00000452680 TOP2BQ02880 1626 aa15.13■□□□□ 0.01
HNRNPA1P43-201ENST00000452680 TOPBP1Q92547 1522 aa15.09■□□□□ 0.01
HNRNPA1P43-201ENST00000452680 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
HNRNPA1P43-201ENST00000452680 CUX1P39880 1505 aa15.07■□□□□ 0
HNRNPA1P43-201ENST00000452680 SYNJ1O43426 1573 aa15.07■□□□□ 0
HNRNPA1P43-201ENST00000452680 CUX2O14529 1486 aa15.05■□□□□ -0
HNRNPA1P43-201ENST00000452680 FGD5Q6ZNL6 1462 aa15□□□□□ -0.01
HNRNPA1P43-201ENST00000452680 WDR97A6NE52 1622 aa14.99□□□□□ -0.01
HNRNPA1P43-201ENST00000452680 POLA1P09884 1462 aaPredicted RBP14.98□□□□□ -0.01
HNRNPA1P43-201ENST00000452680 TRIM41Q8WV44 630 aa14.98□□□□□ -0.01
HNRNPA1P43-201ENST00000452680 IFT140Q96RY7 1462 aa14.96□□□□□ -0.01
HNRNPA1P43-201ENST00000452680 TARBP1Q13395 1621 aaKnown RBP14.91□□□□□ -0.02
HNRNPA1P43-201ENST00000452680 SOGA1O94964 1423 aa14.91□□□□□ -0.02
HNRNPA1P43-201ENST00000452680 ABCA10Q8WWZ4 1543 aa14.9□□□□□ -0.02
HNRNPA1P43-201ENST00000452680 EEA1Q15075 1411 aa14.85□□□□□ -0.03
HNRNPA1P43-201ENST00000452680 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
HNRNPA1P43-201ENST00000452680 KIF27Q86VH2 1401 aa14.84□□□□□ -0.03
HNRNPA1P43-201ENST00000452680 ABCA5Q8WWZ7 1642 aa14.84□□□□□ -0.03
HNRNPA1P43-201ENST00000452680 PBRM1Q86U86 1689 aa14.84□□□□□ -0.03
HNRNPA1P43-201ENST00000452680 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.03
HNRNPA1P43-201ENST00000452680 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
HNRNPA1P43-201ENST00000452680 CUL7Q14999 1698 aa14.78□□□□□ -0.04
HNRNPA1P43-201ENST00000452680 GAPVD1Q14C86 1478 aa14.78□□□□□ -0.04
HNRNPA1P43-201ENST00000452680 ERICH3Q5RHP9 1530 aa14.77□□□□□ -0.04
HNRNPA1P43-201ENST00000452680 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
HNRNPA1P43-201ENST00000452680 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
HNRNPA1P43-201ENST00000452680 ZNF608Q9ULD9 1512 aaPredicted RBP14.73□□□□□ -0.05
HNRNPA1P43-201ENST00000452680 MAGI1Q96QZ7 1491 aaPredicted RBP14.72□□□□□ -0.05
HNRNPA1P43-201ENST00000452680 TDRD9Q8NDG6 1382 aaKnown RBP14.72□□□□□ -0.05
HNRNPA1P43-201ENST00000452680 AQRO60306 1485 aaKnown RBP eCLIP14.69□□□□□ -0.06
HNRNPA1P43-201ENST00000452680 ADAMTS12P58397 1594 aa14.68□□□□□ -0.06
HNRNPA1P43-201ENST00000452680 SNAPC4Q5SXM2 1469 aa14.66□□□□□ -0.06
HNRNPA1P43-201ENST00000452680 KIF21BO75037 1637 aa14.65□□□□□ -0.06
HNRNPA1P43-201ENST00000452680 FHAD1B1AJZ9 1412 aa14.63□□□□□ -0.07
HNRNPA1P43-201ENST00000452680 SYNJ2O15056 1496 aa14.63□□□□□ -0.07
HNRNPA1P43-201ENST00000452680 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
HNRNPA1P43-201ENST00000452680 RUSC2Q8N2Y8 1516 aa14.61□□□□□ -0.07
HNRNPA1P43-201ENST00000452680 CHD1O14646 1710 aa14.61□□□□□ -0.07
HNRNPA1P43-201ENST00000452680 RAPGEF2Q9Y4G8 1499 aa14.59□□□□□ -0.07
HNRNPA1P43-201ENST00000452680 IGF1RP08069 1367 aa14.59□□□□□ -0.07
HNRNPA1P43-201ENST00000452680 CARMIL1Q5VZK9 1371 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms