RNA–Protein interactions for RNA: ENST00000452495.1

TRAPPC12-211, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-211ENST00000452495 NISCHQ9Y2I1 1504 aa35.01■■■■□ 3.2
TRAPPC12-211ENST00000452495 CCDC180Q9P1Z9 1646 aa31.17■■■□□ 2.58
TRAPPC12-211ENST00000452495 ABCC9O60706 1549 aa29.93■■■□□ 2.38
TRAPPC12-211ENST00000452495 ZCCHC6Q5VYS8 1495 aaKnown RBP29.29■■■□□ 2.28
TRAPPC12-211ENST00000452495 NACADO15069 1562 aa29.13■■■□□ 2.25
TRAPPC12-211ENST00000452495 MYO15BQ96JP2 1530 aa29.09■■■□□ 2.25
TRAPPC12-211ENST00000452495 RB1CC1Q8TDY2 1594 aa29.08■■■□□ 2.25
TRAPPC12-211ENST00000452495 DCAF1Q9Y4B6 1507 aa29.07■■■□□ 2.24
TRAPPC12-211ENST00000452495 DCAF8L2P0C7V8 631 aa28.86■■■□□ 2.21
TRAPPC12-211ENST00000452495 AEBP2Q6ZN18 517 aaPredicted RBP28.55■■■□□ 2.16
TRAPPC12-211ENST00000452495 UNC13AQ9UPW8 1703 aa28.52■■■□□ 2.16
TRAPPC12-211ENST00000452495 SCRIBQ14160 1630 aa28.32■■■□□ 2.12
TRAPPC12-211ENST00000452495 BICRAQ9NZM4 1560 aa28.15■■■□□ 2.1
TRAPPC12-211ENST00000452495 SHROOM4Q9ULL8 1493 aa27.99■■■□□ 2.07
TRAPPC12-211ENST00000452495 PABPN1Q86U42 306 aaKnown RBP eCLIP27.89■■■□□ 2.06
TRAPPC12-211ENST00000452495 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.97
TRAPPC12-211ENST00000452495 CC2D2AQ9P2K1 1620 aa27.19■■□□□ 1.94
TRAPPC12-211ENST00000452495 BAZ1AQ9NRL2 1556 aaPredicted RBP27.18■■□□□ 1.94
TRAPPC12-211ENST00000452495 SMARCA4P51532 1647 aa27.16■■□□□ 1.94
TRAPPC12-211ENST00000452495 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
TRAPPC12-211ENST00000452495 CHIC1Q5VXU3 224 aa27.08■■□□□ 1.93
TRAPPC12-211ENST00000452495 DNAJC5BQ9UF47 199 aa27.01■■□□□ 1.91
TRAPPC12-211ENST00000452495 MROH2BQ7Z745 1585 aa26.96■■□□□ 1.91
TRAPPC12-211ENST00000452495 PEG3Q9GZU2 1588 aa26.92■■□□□ 1.9
TRAPPC12-211ENST00000452495 SMARCA2P51531 1590 aa26.91■■□□□ 1.9
TRAPPC12-211ENST00000452495 ATAD2BQ9ULI0 1458 aa26.84■■□□□ 1.89
TRAPPC12-211ENST00000452495 NCAPD3P42695 1498 aa26.79■■□□□ 1.88
TRAPPC12-211ENST00000452495 HMGXB3Q12766 1538 aa26.79■■□□□ 1.88
TRAPPC12-211ENST00000452495 WIZO95785 1651 aa26.74■■□□□ 1.87
TRAPPC12-211ENST00000452495 RSF1Q96T23 1441 aaPredicted RBP26.73■■□□□ 1.87
TRAPPC12-211ENST00000452495 BAZ1BQ9UIG0 1483 aaKnown RBP26.67■■□□□ 1.86
TRAPPC12-211ENST00000452495 TOP2AP11388 1531 aaKnown RBP26.51■■□□□ 1.83
TRAPPC12-211ENST00000452495 SUPT5HO00267 1087 aaKnown RBP26.16■■□□□ 1.78
TRAPPC12-211ENST00000452495 LAMC3Q9Y6N6 1575 aa26.12■■□□□ 1.77
TRAPPC12-211ENST00000452495 CCDC88BA6NC98 1476 aa26.09■■□□□ 1.77
TRAPPC12-211ENST00000452495 PRDM2Q13029 1718 aa26.04■■□□□ 1.76
TRAPPC12-211ENST00000452495 NESP48681 1621 aa25.99■■□□□ 1.75
TRAPPC12-211ENST00000452495 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
TRAPPC12-211ENST00000452495 CFTRP13569 1480 aa25.94■■□□□ 1.74
TRAPPC12-211ENST00000452495 KIF21AQ7Z4S6 1674 aa25.87■■□□□ 1.73
TRAPPC12-211ENST00000452495 PDS5BQ9NTI5 1447 aa25.83■■□□□ 1.73
TRAPPC12-211ENST00000452495 ERCC6Q03468 1493 aa25.81■■□□□ 1.72
TRAPPC12-211ENST00000452495 FANCD2Q9BXW9 1451 aa25.72■■□□□ 1.71
TRAPPC12-211ENST00000452495 CEP164Q9UPV0 1460 aa25.7■■□□□ 1.7
TRAPPC12-211ENST00000452495 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
TRAPPC12-211ENST00000452495 MRC2Q9UBG0 1479 aa25.59■■□□□ 1.69
TRAPPC12-211ENST00000452495 WDR62O43379 1518 aa25.54■■□□□ 1.68
TRAPPC12-211ENST00000452495 CUX2O14529 1486 aa25.48■■□□□ 1.67
TRAPPC12-211ENST00000452495 URB2Q14146 1524 aaKnown RBP25.45■■□□□ 1.66
TRAPPC12-211ENST00000452495 ABCC8Q09428 1581 aa25.43■■□□□ 1.66
TRAPPC12-211ENST00000452495 DNMBPQ6XZF7 1577 aa25.43■■□□□ 1.66
TRAPPC12-211ENST00000452495 TOPBP1Q92547 1522 aa25.37■■□□□ 1.65
TRAPPC12-211ENST00000452495 CUX1P39880 1505 aa25.3■■□□□ 1.64
TRAPPC12-211ENST00000452495 BIVM-ERCC5R4GMW8 1640 aa25.28■■□□□ 1.64
TRAPPC12-211ENST00000452495 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
TRAPPC12-211ENST00000452495 WRNQ14191 1432 aaPredicted RBP eCLIP25.23■■□□□ 1.63
TRAPPC12-211ENST00000452495 SYNJ1O43426 1573 aa25.21■■□□□ 1.63
TRAPPC12-211ENST00000452495 POLA1P09884 1462 aaPredicted RBP25.16■■□□□ 1.62
TRAPPC12-211ENST00000452495 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
TRAPPC12-211ENST00000452495 IFT140Q96RY7 1462 aa25.14■■□□□ 1.61
TRAPPC12-211ENST00000452495 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
TRAPPC12-211ENST00000452495 WDR97A6NE52 1622 aa25.09■■□□□ 1.61
TRAPPC12-211ENST00000452495 SOGA1O94964 1423 aa25■■□□□ 1.59
TRAPPC12-211ENST00000452495 EIF4G3O43432 1585 aaKnown RBP24.98■■□□□ 1.59
TRAPPC12-211ENST00000452495 RAD54L2Q9Y4B4 1467 aa24.98■■□□□ 1.59
TRAPPC12-211ENST00000452495 ABCA10Q8WWZ4 1543 aa24.95■■□□□ 1.58
TRAPPC12-211ENST00000452495 ZNF608Q9ULD9 1512 aaPredicted RBP24.92■■□□□ 1.58
TRAPPC12-211ENST00000452495 ABCA5Q8WWZ7 1642 aa24.9■■□□□ 1.58
TRAPPC12-211ENST00000452495 PBRM1Q86U86 1689 aa24.87■■□□□ 1.57
TRAPPC12-211ENST00000452495 AQRO60306 1485 aaKnown RBP eCLIP24.79■■□□□ 1.56
TRAPPC12-211ENST00000452495 TDRD9Q8NDG6 1382 aaKnown RBP24.78■■□□□ 1.56
TRAPPC12-211ENST00000452495 GAPVD1Q14C86 1478 aa24.77■■□□□ 1.56
TRAPPC12-211ENST00000452495 TRIM41Q8WV44 630 aa24.74■■□□□ 1.55
TRAPPC12-211ENST00000452495 GRIN2BQ13224 1484 aa24.74■■□□□ 1.55
TRAPPC12-211ENST00000452495 ERICH3Q5RHP9 1530 aa24.7■■□□□ 1.54
TRAPPC12-211ENST00000452495 MAGI1Q96QZ7 1491 aaPredicted RBP24.69■■□□□ 1.54
TRAPPC12-211ENST00000452495 KIF27Q86VH2 1401 aa24.69■■□□□ 1.54
TRAPPC12-211ENST00000452495 SNAPC4Q5SXM2 1469 aa24.65■■□□□ 1.54
TRAPPC12-211ENST00000452495 CHD1O14646 1710 aa24.64■■□□□ 1.54
TRAPPC12-211ENST00000452495 ADAMTS12P58397 1594 aa24.63■■□□□ 1.53
TRAPPC12-211ENST00000452495 CUL7Q14999 1698 aa24.61■■□□□ 1.53
TRAPPC12-211ENST00000452495 SYNJ2O15056 1496 aa24.55■■□□□ 1.52
TRAPPC12-211ENST00000452495 FHAD1B1AJZ9 1412 aa24.51■■□□□ 1.51
TRAPPC12-211ENST00000452495 RUSC2Q8N2Y8 1516 aa24.49■■□□□ 1.51
TRAPPC12-211ENST00000452495 EEA1Q15075 1411 aa24.48■■□□□ 1.51
TRAPPC12-211ENST00000452495 IGF1RP08069 1367 aa24.45■■□□□ 1.5
TRAPPC12-211ENST00000452495 GRIN2AQ12879 1464 aa24.44■■□□□ 1.5
TRAPPC12-211ENST00000452495 CHMP7Q8WUX9 453 aaPredicted RBP24.38■■□□□ 1.49
TRAPPC12-211ENST00000452495 FBLN2P98095 1184 aa24.35■■□□□ 1.49
TRAPPC12-211ENST00000452495 CARMIL1Q5VZK9 1371 aa24.34■■□□□ 1.49
TRAPPC12-211ENST00000452495 CEP170Q5SW79 1584 aa24.33■■□□□ 1.48
TRAPPC12-211ENST00000452495 CLASP1Q7Z460 1538 aa24.32■■□□□ 1.48
TRAPPC12-211ENST00000452495 OSCARQ8IYS5 282 aa24.32■■□□□ 1.48
TRAPPC12-211ENST00000452495 NUP160Q12769 1436 aa24.31■■□□□ 1.48
TRAPPC12-211ENST00000452495 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
TRAPPC12-211ENST00000452495 PRXQ9BXM0 1461 aa24.3■■□□□ 1.48
TRAPPC12-211ENST00000452495 KIF21BO75037 1637 aa24.27■■□□□ 1.48
TRAPPC12-211ENST00000452495 CSRNP3Q8WYN3 585 aa24.24■■□□□ 1.47
TRAPPC12-211ENST00000452495 CTTNBP2Q8WZ74 1663 aa24.24■■□□□ 1.47
TRAPPC12-211ENST00000452495 SENP3Q9H4L4 574 aaPredicted RBP24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms