RNA–Protein interactions for RNA: ENST00000452413.1

KCTD3-203, Transcript of potassium channel tetramerization domain containing 3, humanhuman

TSL 3

Gene KCTD3, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-203ENST00000452413 NISCHQ9Y2I1 1504 aa23.38■■□□□ 1.33
KCTD3-203ENST00000452413 CCDC180Q9P1Z9 1646 aa20.7■□□□□ 0.9
KCTD3-203ENST00000452413 ABCC9O60706 1549 aa20.37■□□□□ 0.85
KCTD3-203ENST00000452413 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
KCTD3-203ENST00000452413 AEBP2Q6ZN18 517 aaPredicted RBP19.65■□□□□ 0.74
KCTD3-203ENST00000452413 CHIC1Q5VXU3 224 aa19.59■□□□□ 0.73
KCTD3-203ENST00000452413 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
KCTD3-203ENST00000452413 NACADO15069 1562 aa19.52■□□□□ 0.71
KCTD3-203ENST00000452413 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
KCTD3-203ENST00000452413 MYO15BQ96JP2 1530 aa19.33■□□□□ 0.68
KCTD3-203ENST00000452413 DCAF1Q9Y4B6 1507 aa19.27■□□□□ 0.68
KCTD3-203ENST00000452413 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
KCTD3-203ENST00000452413 SCRIBQ14160 1630 aa19.01■□□□□ 0.63
KCTD3-203ENST00000452413 UNC13AQ9UPW8 1703 aa18.93■□□□□ 0.62
KCTD3-203ENST00000452413 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
KCTD3-203ENST00000452413 SHROOM4Q9ULL8 1493 aa18.73■□□□□ 0.59
KCTD3-203ENST00000452413 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
KCTD3-203ENST00000452413 EIF4G1Q04637 1599 aaKnown RBP18.42■□□□□ 0.54
KCTD3-203ENST00000452413 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
KCTD3-203ENST00000452413 CECR2Q9BXF3 1484 aa18.28■□□□□ 0.52
KCTD3-203ENST00000452413 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
KCTD3-203ENST00000452413 SMARCA4P51532 1647 aa18.11■□□□□ 0.49
KCTD3-203ENST00000452413 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
KCTD3-203ENST00000452413 ATAD2BQ9ULI0 1458 aa18.02■□□□□ 0.48
KCTD3-203ENST00000452413 MROH2BQ7Z745 1585 aa18.01■□□□□ 0.47
KCTD3-203ENST00000452413 NCAPD3P42695 1498 aa18■□□□□ 0.47
KCTD3-203ENST00000452413 BAZ1BQ9UIG0 1483 aaKnown RBP17.97■□□□□ 0.47
KCTD3-203ENST00000452413 HMGXB3Q12766 1538 aa17.88■□□□□ 0.45
KCTD3-203ENST00000452413 RSF1Q96T23 1441 aaPredicted RBP17.86■□□□□ 0.45
KCTD3-203ENST00000452413 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
KCTD3-203ENST00000452413 WIZO95785 1651 aa17.83■□□□□ 0.45
KCTD3-203ENST00000452413 SUPT5HO00267 1087 aaKnown RBP17.74■□□□□ 0.43
KCTD3-203ENST00000452413 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
KCTD3-203ENST00000452413 TOP2AP11388 1531 aaKnown RBP17.65■□□□□ 0.42
KCTD3-203ENST00000452413 NESP48681 1621 aa17.57■□□□□ 0.4
KCTD3-203ENST00000452413 CADPSQ9ULU8 1353 aa17.54■□□□□ 0.4
KCTD3-203ENST00000452413 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
KCTD3-203ENST00000452413 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.4
KCTD3-203ENST00000452413 CCDC88BA6NC98 1476 aa17.48■□□□□ 0.39
KCTD3-203ENST00000452413 CFTRP13569 1480 aa17.38■□□□□ 0.37
KCTD3-203ENST00000452413 FANCD2Q9BXW9 1451 aa17.35■□□□□ 0.37
KCTD3-203ENST00000452413 CEP164Q9UPV0 1460 aa17.35■□□□□ 0.37
KCTD3-203ENST00000452413 KIF21AQ7Z4S6 1674 aa17.31■□□□□ 0.36
KCTD3-203ENST00000452413 PHF23Q9BUL5 403 aaPredicted RBP17.3■□□□□ 0.36
KCTD3-203ENST00000452413 CUX2O14529 1486 aa17.28■□□□□ 0.36
KCTD3-203ENST00000452413 MRC2Q9UBG0 1479 aa17.27■□□□□ 0.36
KCTD3-203ENST00000452413 THOC2Q8NI27 1593 aaKnown RBP17.19■□□□□ 0.34
KCTD3-203ENST00000452413 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
KCTD3-203ENST00000452413 WDR62O43379 1518 aa17.12■□□□□ 0.33
KCTD3-203ENST00000452413 ABCC8Q09428 1581 aa17.11■□□□□ 0.33
KCTD3-203ENST00000452413 URB2Q14146 1524 aaKnown RBP17.09■□□□□ 0.33
KCTD3-203ENST00000452413 TOPBP1Q92547 1522 aa17.03■□□□□ 0.32
KCTD3-203ENST00000452413 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.31
KCTD3-203ENST00000452413 IFT140Q96RY7 1462 aa16.96■□□□□ 0.31
KCTD3-203ENST00000452413 SOGA1O94964 1423 aa16.93■□□□□ 0.3
KCTD3-203ENST00000452413 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
KCTD3-203ENST00000452413 CUX1P39880 1505 aa16.9■□□□□ 0.3
KCTD3-203ENST00000452413 FGD5Q6ZNL6 1462 aa16.89■□□□□ 0.29
KCTD3-203ENST00000452413 POLA1P09884 1462 aaPredicted RBP16.88■□□□□ 0.29
KCTD3-203ENST00000452413 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
KCTD3-203ENST00000452413 FBLN2P98095 1184 aa16.83■□□□□ 0.28
KCTD3-203ENST00000452413 TDRD9Q8NDG6 1382 aaKnown RBP16.83■□□□□ 0.28
KCTD3-203ENST00000452413 ZNF608Q9ULD9 1512 aaPredicted RBP16.82■□□□□ 0.28
KCTD3-203ENST00000452413 AQRO60306 1485 aaKnown RBP eCLIP16.8■□□□□ 0.28
KCTD3-203ENST00000452413 TOP2BQ02880 1626 aa16.77■□□□□ 0.27
KCTD3-203ENST00000452413 TRIM41Q8WV44 630 aa16.76■□□□□ 0.27
KCTD3-203ENST00000452413 TARBP1Q13395 1621 aaKnown RBP16.76■□□□□ 0.27
KCTD3-203ENST00000452413 SYNJ1O43426 1573 aa16.76■□□□□ 0.27
KCTD3-203ENST00000452413 OSCARQ8IYS5 282 aa16.75■□□□□ 0.27
KCTD3-203ENST00000452413 EIF4G3O43432 1585 aaKnown RBP16.74■□□□□ 0.27
KCTD3-203ENST00000452413 DNAJC5Q9H3Z4 198 aa16.74■□□□□ 0.27
KCTD3-203ENST00000452413 BIVM-ERCC5R4GMW8 1640 aa16.73■□□□□ 0.27
KCTD3-203ENST00000452413 CHMP7Q8WUX9 453 aaPredicted RBP16.72■□□□□ 0.27
KCTD3-203ENST00000452413 GAPVD1Q14C86 1478 aa16.69■□□□□ 0.26
KCTD3-203ENST00000452413 ABCA10Q8WWZ4 1543 aa16.69■□□□□ 0.26
KCTD3-203ENST00000452413 GRIN2BQ13224 1484 aa16.68■□□□□ 0.26
KCTD3-203ENST00000452413 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
KCTD3-203ENST00000452413 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
KCTD3-203ENST00000452413 KIF27Q86VH2 1401 aa16.61■□□□□ 0.25
KCTD3-203ENST00000452413 MAGI1Q96QZ7 1491 aaPredicted RBP16.6■□□□□ 0.25
KCTD3-203ENST00000452413 SENP3Q9H4L4 574 aaPredicted RBP16.58■□□□□ 0.24
KCTD3-203ENST00000452413 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
KCTD3-203ENST00000452413 ABCA5Q8WWZ7 1642 aa16.56■□□□□ 0.24
KCTD3-203ENST00000452413 SYNJ2O15056 1496 aa16.54■□□□□ 0.24
KCTD3-203ENST00000452413 FHAD1B1AJZ9 1412 aa16.51■□□□□ 0.23
KCTD3-203ENST00000452413 CHD1O14646 1710 aa16.5■□□□□ 0.23
KCTD3-203ENST00000452413 ERICH3Q5RHP9 1530 aa16.5■□□□□ 0.23
KCTD3-203ENST00000452413 IGF1RP08069 1367 aa16.44■□□□□ 0.22
KCTD3-203ENST00000452413 GRIN2AQ12879 1464 aa16.43■□□□□ 0.22
KCTD3-203ENST00000452413 FAM9AQ8IZU1 332 aaPredicted RBP16.43■□□□□ 0.22
KCTD3-203ENST00000452413 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
KCTD3-203ENST00000452413 CARMIL1Q5VZK9 1371 aa16.42■□□□□ 0.22
KCTD3-203ENST00000452413 CUL7Q14999 1698 aa16.37■□□□□ 0.21
KCTD3-203ENST00000452413 RUSC2Q8N2Y8 1516 aa16.35■□□□□ 0.21
KCTD3-203ENST00000452413 CYB5RLQ6IPT4 315 aa16.35■□□□□ 0.21
KCTD3-203ENST00000452413 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
KCTD3-203ENST00000452413 RAPGEF2Q9Y4G8 1499 aa16.31■□□□□ 0.2
KCTD3-203ENST00000452413 ARHGEF11O15085 1522 aa16.3■□□□□ 0.2
KCTD3-203ENST00000452413 EEA1Q15075 1411 aa16.3■□□□□ 0.2
KCTD3-203ENST00000452413 JPH4Q96JJ6 628 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms