RNA–Protein interactions for RNA: ENST00000451122.5

CAV1-206, Transcript of caveolin 1, humanhuman

TSL 1 (best)

Gene CAV1, Length 1,653 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAV1-206ENST00000451122 NISCHQ9Y2I1 1504 aa49.23■■■■■ 5.47
CAV1-206ENST00000451122 CCDC180Q9P1Z9 1646 aa42.98■■■■■ 4.47
CAV1-206ENST00000451122 ZCCHC6Q5VYS8 1495 aaKnown RBP41.37■■■■■ 4.21
CAV1-206ENST00000451122 DCAF1Q9Y4B6 1507 aa40.75■■■■■ 4.11
CAV1-206ENST00000451122 DCAF8L2P0C7V8 631 aa40.54■■■■■ 4.08
CAV1-206ENST00000451122 ABCC9O60706 1549 aa40.42■■■■■ 4.06
CAV1-206ENST00000451122 MYO15BQ96JP2 1530 aa40.23■■■■■ 4.03
CAV1-206ENST00000451122 SHROOM4Q9ULL8 1493 aa40.13■■■■■ 4.01
CAV1-206ENST00000451122 NACADO15069 1562 aa39.97■■■■□ 3.99
CAV1-206ENST00000451122 RB1CC1Q8TDY2 1594 aa39.6■■■■□ 3.93
CAV1-206ENST00000451122 SCRIBQ14160 1630 aa39.45■■■■□ 3.91
CAV1-206ENST00000451122 UNC13AQ9UPW8 1703 aa38.83■■■■□ 3.81
CAV1-206ENST00000451122 SUPT5HO00267 1087 aaKnown RBP38.67■■■■□ 3.78
CAV1-206ENST00000451122 BICRAQ9NZM4 1560 aa38.36■■■■□ 3.73
CAV1-206ENST00000451122 RSF1Q96T23 1441 aaPredicted RBP38.19■■■■□ 3.7
CAV1-206ENST00000451122 CECR2Q9BXF3 1484 aa38.18■■■■□ 3.7
CAV1-206ENST00000451122 PABPN1Q86U42 306 aaKnown RBP eCLIP38.1■■■■□ 3.69
CAV1-206ENST00000451122 BAZ1AQ9NRL2 1556 aaPredicted RBP38.03■■■■□ 3.68
CAV1-206ENST00000451122 MROH2BQ7Z745 1585 aa38.01■■■■□ 3.67
CAV1-206ENST00000451122 SMARCA4P51532 1647 aa37.85■■■■□ 3.65
CAV1-206ENST00000451122 WIZO95785 1651 aa37.74■■■■□ 3.63
CAV1-206ENST00000451122 PEG3Q9GZU2 1588 aa37.39■■■■□ 3.58
CAV1-206ENST00000451122 TOP2AP11388 1531 aaKnown RBP37.38■■■■□ 3.57
CAV1-206ENST00000451122 SMARCA2P51531 1590 aa37.2■■■■□ 3.55
CAV1-206ENST00000451122 EIF4G1Q04637 1599 aaKnown RBP37.2■■■■□ 3.55
CAV1-206ENST00000451122 ATAD2BQ9ULI0 1458 aa37.16■■■■□ 3.54
CAV1-206ENST00000451122 CHIC1Q5VXU3 224 aa37.09■■■■□ 3.53
CAV1-206ENST00000451122 BAZ1BQ9UIG0 1483 aaKnown RBP36.99■■■■□ 3.51
CAV1-206ENST00000451122 CCDC88BA6NC98 1476 aa36.95■■■■□ 3.5
CAV1-206ENST00000451122 HMGXB3Q12766 1538 aa36.84■■■■□ 3.49
CAV1-206ENST00000451122 NCAPD3P42695 1498 aa36.83■■■■□ 3.49
CAV1-206ENST00000451122 CC2D2AQ9P2K1 1620 aa36.64■■■■□ 3.46
CAV1-206ENST00000451122 TRIM41Q8WV44 630 aa36.4■■■■□ 3.42
CAV1-206ENST00000451122 ABCC8Q09428 1581 aa36.19■■■■□ 3.38
CAV1-206ENST00000451122 CFTRP13569 1480 aa36.04■■■■□ 3.36
CAV1-206ENST00000451122 PRDM2Q13029 1718 aa36.01■■■■□ 3.35
CAV1-206ENST00000451122 WRNQ14191 1432 aaPredicted RBP eCLIP35.97■■■■□ 3.35
CAV1-206ENST00000451122 CADPSQ9ULU8 1353 aa35.88■■■■□ 3.34
CAV1-206ENST00000451122 SYNJ1O43426 1573 aa35.82■■■■□ 3.32
CAV1-206ENST00000451122 TOP2BQ02880 1626 aa35.7■■■■□ 3.31
CAV1-206ENST00000451122 BIVM-ERCC5R4GMW8 1640 aa35.7■■■■□ 3.31
CAV1-206ENST00000451122 FAM9AQ8IZU1 332 aaPredicted RBP35.68■■■■□ 3.3
CAV1-206ENST00000451122 LOC105371045A0A1W2PR82 267 aa35.63■■■■□ 3.29
CAV1-206ENST00000451122 LAMC3Q9Y6N6 1575 aa35.62■■■■□ 3.29
CAV1-206ENST00000451122 EEA1Q15075 1411 aa35.57■■■■□ 3.28
CAV1-206ENST00000451122 CUX1P39880 1505 aa35.55■■■■□ 3.28
CAV1-206ENST00000451122 DNAJC5BQ9UF47 199 aa35.51■■■■□ 3.28
CAV1-206ENST00000451122 NESP48681 1621 aa35.51■■■■□ 3.27
CAV1-206ENST00000451122 FANCD2Q9BXW9 1451 aa35.5■■■■□ 3.27
CAV1-206ENST00000451122 SOGA1O94964 1423 aa35.5■■■■□ 3.27
CAV1-206ENST00000451122 RUSC2Q8N2Y8 1516 aa35.36■■■■□ 3.25
CAV1-206ENST00000451122 PDS5BQ9NTI5 1447 aa35.31■■■■□ 3.24
CAV1-206ENST00000451122 CEP164Q9UPV0 1460 aa35.29■■■■□ 3.24
CAV1-206ENST00000451122 CSRNP3Q8WYN3 585 aa35.29■■■■□ 3.24
CAV1-206ENST00000451122 DNMBPQ6XZF7 1577 aa35.25■■■■□ 3.23
CAV1-206ENST00000451122 KIF21AQ7Z4S6 1674 aa35.18■■■■□ 3.22
CAV1-206ENST00000451122 FGD5Q6ZNL6 1462 aa35.15■■■■□ 3.22
CAV1-206ENST00000451122 EHMT2Q96KQ7 1210 aa35.14■■■■□ 3.22
CAV1-206ENST00000451122 TOPBP1Q92547 1522 aa35.14■■■■□ 3.22
CAV1-206ENST00000451122 KIF21BO75037 1637 aa35.1■■■■□ 3.21
CAV1-206ENST00000451122 KIF27Q86VH2 1401 aa35.07■■■■□ 3.2
CAV1-206ENST00000451122 GOLGA3Q08378 1498 aa35.06■■■■□ 3.2
CAV1-206ENST00000451122 URB2Q14146 1524 aaKnown RBP35.05■■■■□ 3.2
CAV1-206ENST00000451122 POLA1P09884 1462 aaPredicted RBP34.96■■■■□ 3.19
CAV1-206ENST00000451122 CUX2O14529 1486 aa34.94■■■■□ 3.18
CAV1-206ENST00000451122 TNIKQ9UKE5 1360 aa34.94■■■■□ 3.18
CAV1-206ENST00000451122 MRC2Q9UBG0 1479 aa34.86■■■■□ 3.17
CAV1-206ENST00000451122 ABCA10Q8WWZ4 1543 aa34.86■■■■□ 3.17
CAV1-206ENST00000451122 UBTFP17480 764 aaKnown RBP34.84■■■■□ 3.17
CAV1-206ENST00000451122 ERICH3Q5RHP9 1530 aa34.84■■■■□ 3.17
CAV1-206ENST00000451122 PRXQ9BXM0 1461 aa34.83■■■■□ 3.17
CAV1-206ENST00000451122 RAD54L2Q9Y4B4 1467 aa34.82■■■■□ 3.16
CAV1-206ENST00000451122 RAPGEF2Q9Y4G8 1499 aa34.8■■■■□ 3.16
CAV1-206ENST00000451122 WDR97A6NE52 1622 aa34.79■■■■□ 3.16
CAV1-206ENST00000451122 CEP162Q5TB80 1403 aa34.74■■■■□ 3.15
CAV1-206ENST00000451122 IGF1RP08069 1367 aa34.69■■■■□ 3.14
CAV1-206ENST00000451122 ERCC6Q03468 1493 aa34.69■■■■□ 3.14
CAV1-206ENST00000451122 WDR62O43379 1518 aa34.67■■■■□ 3.14
CAV1-206ENST00000451122 TARBP1Q13395 1621 aaKnown RBP34.62■■■■□ 3.13
CAV1-206ENST00000451122 ABCA5Q8WWZ7 1642 aa34.59■■■■□ 3.13
CAV1-206ENST00000451122 CARMIL1Q5VZK9 1371 aa34.56■■■■□ 3.12
CAV1-206ENST00000451122 THOC2Q8NI27 1593 aaKnown RBP34.55■■■■□ 3.12
CAV1-206ENST00000451122 CUL7Q14999 1698 aa34.54■■■■□ 3.12
CAV1-206ENST00000451122 GAPVD1Q14C86 1478 aa34.48■■■■□ 3.11
CAV1-206ENST00000451122 CLIP1P30622 1438 aa34.46■■■■□ 3.11
CAV1-206ENST00000451122 IFT140Q96RY7 1462 aa34.45■■■■□ 3.11
CAV1-206ENST00000451122 TDRD9Q8NDG6 1382 aaKnown RBP34.45■■■■□ 3.11
CAV1-206ENST00000451122 PBRM1Q86U86 1689 aa34.36■■■■□ 3.09
CAV1-206ENST00000451122 AQRO60306 1485 aaKnown RBP eCLIP34.23■■■■□ 3.07
CAV1-206ENST00000451122 GRIN2BQ13224 1484 aa34.22■■■■□ 3.07
CAV1-206ENST00000451122 ZNF608Q9ULD9 1512 aaPredicted RBP34.19■■■■□ 3.06
CAV1-206ENST00000451122 CTTNBP2Q8WZ74 1663 aa34.19■■■■□ 3.06
CAV1-206ENST00000451122 RANGAP1P46060 587 aaPredicted RBP34.19■■■■□ 3.06
CAV1-206ENST00000451122 VPS8Q8N3P4 1428 aa34.18■■■■□ 3.06
CAV1-206ENST00000451122 TRIM26Q12899 539 aaPredicted RBP34.16■■■■□ 3.06
CAV1-206ENST00000451122 EIF4G3O43432 1585 aaKnown RBP34.14■■■■□ 3.06
CAV1-206ENST00000451122 ADAMTS12P58397 1594 aa34.13■■■■□ 3.05
CAV1-206ENST00000451122 FHAD1B1AJZ9 1412 aa34.12■■■■□ 3.05
CAV1-206ENST00000451122 ARAP1Q96P48 1450 aa34.11■■■■□ 3.05
CAV1-206ENST00000451122 PCGF6Q9BYE7 350 aa34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms