RNA–Protein interactions for RNA: ENST00000450638.5

TCN2-205, Transcript of transcobalamin 2, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene TCN2, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-205ENST00000450638 NISCHQ9Y2I1 1504 aa26.15■■□□□ 1.78
TCN2-205ENST00000450638 CCDC180Q9P1Z9 1646 aa22.55■■□□□ 1.2
TCN2-205ENST00000450638 ZCCHC6Q5VYS8 1495 aaKnown RBP22.01■■□□□ 1.11
TCN2-205ENST00000450638 DCAF8L2P0C7V8 631 aa21.78■■□□□ 1.08
TCN2-205ENST00000450638 SHROOM4Q9ULL8 1493 aa21.76■■□□□ 1.07
TCN2-205ENST00000450638 DCAF1Q9Y4B6 1507 aa21.55■■□□□ 1.04
TCN2-205ENST00000450638 ABCC9O60706 1549 aa21.2■□□□□ 0.98
TCN2-205ENST00000450638 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
TCN2-205ENST00000450638 MYO15BQ96JP2 1530 aa21.15■□□□□ 0.98
TCN2-205ENST00000450638 NACADO15069 1562 aa20.99■□□□□ 0.95
TCN2-205ENST00000450638 SCRIBQ14160 1630 aa20.91■□□□□ 0.94
TCN2-205ENST00000450638 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
TCN2-205ENST00000450638 RSF1Q96T23 1441 aaPredicted RBP20.45■□□□□ 0.86
TCN2-205ENST00000450638 CHIC1Q5VXU3 224 aa20.34■□□□□ 0.85
TCN2-205ENST00000450638 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
TCN2-205ENST00000450638 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
TCN2-205ENST00000450638 MROH2BQ7Z745 1585 aa20.23■□□□□ 0.83
TCN2-205ENST00000450638 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
TCN2-205ENST00000450638 PABPN1Q86U42 306 aaKnown RBP eCLIP20.14■□□□□ 0.81
TCN2-205ENST00000450638 WIZO95785 1651 aa20.08■□□□□ 0.81
TCN2-205ENST00000450638 BICRAQ9NZM4 1560 aa20.06■□□□□ 0.8
TCN2-205ENST00000450638 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
TCN2-205ENST00000450638 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
TCN2-205ENST00000450638 TRIM41Q8WV44 630 aa19.84■□□□□ 0.77
TCN2-205ENST00000450638 CCDC88BA6NC98 1476 aa19.72■□□□□ 0.75
TCN2-205ENST00000450638 PEG3Q9GZU2 1588 aa19.69■□□□□ 0.74
TCN2-205ENST00000450638 SMARCA2P51531 1590 aa19.68■□□□□ 0.74
TCN2-205ENST00000450638 LOC105371045A0A1W2PR82 267 aa19.64■□□□□ 0.74
TCN2-205ENST00000450638 ATAD2BQ9ULI0 1458 aa19.64■□□□□ 0.73
TCN2-205ENST00000450638 EIF4G1Q04637 1599 aaKnown RBP19.58■□□□□ 0.72
TCN2-205ENST00000450638 BAZ1BQ9UIG0 1483 aaKnown RBP19.57■□□□□ 0.72
TCN2-205ENST00000450638 FAM9AQ8IZU1 332 aaPredicted RBP19.54■□□□□ 0.72
TCN2-205ENST00000450638 ABCC8Q09428 1581 aa19.42■□□□□ 0.7
TCN2-205ENST00000450638 NCAPD3P42695 1498 aa19.38■□□□□ 0.69
TCN2-205ENST00000450638 HMGXB3Q12766 1538 aa19.35■□□□□ 0.69
TCN2-205ENST00000450638 EHMT2Q96KQ7 1210 aa19.31■□□□□ 0.68
TCN2-205ENST00000450638 WRNQ14191 1432 aaPredicted RBP eCLIP19.27■□□□□ 0.68
TCN2-205ENST00000450638 SOGA1O94964 1423 aa19.16■□□□□ 0.66
TCN2-205ENST00000450638 EEA1Q15075 1411 aa19.16■□□□□ 0.66
TCN2-205ENST00000450638 PCGF6Q9BYE7 350 aa19.16■□□□□ 0.66
TCN2-205ENST00000450638 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
TCN2-205ENST00000450638 SYNJ1O43426 1573 aa19.11■□□□□ 0.65
TCN2-205ENST00000450638 CSRNP3Q8WYN3 585 aa19.11■□□□□ 0.65
TCN2-205ENST00000450638 CFTRP13569 1480 aa19.06■□□□□ 0.64
TCN2-205ENST00000450638 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
TCN2-205ENST00000450638 TRIM26Q12899 539 aaPredicted RBP19.02■□□□□ 0.63
TCN2-205ENST00000450638 TOP2BQ02880 1626 aa19■□□□□ 0.63
TCN2-205ENST00000450638 UBTFP17480 764 aaKnown RBP18.98■□□□□ 0.63
TCN2-205ENST00000450638 CADPSQ9ULU8 1353 aa18.97■□□□□ 0.63
TCN2-205ENST00000450638 TNIKQ9UKE5 1360 aa18.94■□□□□ 0.62
TCN2-205ENST00000450638 BIVM-ERCC5R4GMW8 1640 aa18.94■□□□□ 0.62
TCN2-205ENST00000450638 GOLGA3Q08378 1498 aa18.93■□□□□ 0.62
TCN2-205ENST00000450638 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
TCN2-205ENST00000450638 CUX1P39880 1505 aa18.89■□□□□ 0.61
TCN2-205ENST00000450638 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
TCN2-205ENST00000450638 CEP162Q5TB80 1403 aa18.88■□□□□ 0.61
TCN2-205ENST00000450638 KIF21BO75037 1637 aa18.83■□□□□ 0.61
TCN2-205ENST00000450638 HRCP23327 699 aa18.82■□□□□ 0.6
TCN2-205ENST00000450638 KIF27Q86VH2 1401 aa18.77■□□□□ 0.6
TCN2-205ENST00000450638 FANCD2Q9BXW9 1451 aa18.76■□□□□ 0.59
TCN2-205ENST00000450638 PPARGC1BQ86YN6 1023 aaKnown RBP18.75■□□□□ 0.59
TCN2-205ENST00000450638 RAPGEF2Q9Y4G8 1499 aa18.73■□□□□ 0.59
TCN2-205ENST00000450638 NESP48681 1621 aa18.68■□□□□ 0.58
TCN2-205ENST00000450638 PRXQ9BXM0 1461 aa18.67■□□□□ 0.58
TCN2-205ENST00000450638 CLIP1P30622 1438 aa18.67■□□□□ 0.58
TCN2-205ENST00000450638 LAMC3Q9Y6N6 1575 aa18.66■□□□□ 0.58
TCN2-205ENST00000450638 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
TCN2-205ENST00000450638 FGD5Q6ZNL6 1462 aa18.65■□□□□ 0.58
TCN2-205ENST00000450638 CUX2O14529 1486 aa18.64■□□□□ 0.57
TCN2-205ENST00000450638 RANGAP1P46060 587 aaPredicted RBP18.62■□□□□ 0.57
TCN2-205ENST00000450638 DNAJC5BQ9UF47 199 aa18.61■□□□□ 0.57
TCN2-205ENST00000450638 DNMBPQ6XZF7 1577 aa18.6■□□□□ 0.57
TCN2-205ENST00000450638 PDS5BQ9NTI5 1447 aa18.59■□□□□ 0.57
TCN2-205ENST00000450638 TOPBP1Q92547 1522 aa18.57■□□□□ 0.56
TCN2-205ENST00000450638 TTBK1Q5TCY1 1321 aaPredicted RBP18.56■□□□□ 0.56
TCN2-205ENST00000450638 IGF1RP08069 1367 aa18.56■□□□□ 0.56
TCN2-205ENST00000450638 APLP2Q06481 763 aa18.53■□□□□ 0.56
TCN2-205ENST00000450638 VPS8Q8N3P4 1428 aa18.52■□□□□ 0.56
TCN2-205ENST00000450638 POLA1P09884 1462 aaPredicted RBP18.51■□□□□ 0.55
TCN2-205ENST00000450638 CARMIL1Q5VZK9 1371 aa18.5■□□□□ 0.55
TCN2-205ENST00000450638 RAD54L2Q9Y4B4 1467 aa18.49■□□□□ 0.55
TCN2-205ENST00000450638 ABCA10Q8WWZ4 1543 aa18.47■□□□□ 0.55
TCN2-205ENST00000450638 URB2Q14146 1524 aaKnown RBP18.47■□□□□ 0.55
TCN2-205ENST00000450638 ZEB1P37275 1124 aaPredicted RBP18.45■□□□□ 0.54
TCN2-205ENST00000450638 KIF21AQ7Z4S6 1674 aa18.4■□□□□ 0.54
TCN2-205ENST00000450638 ARAP1Q96P48 1450 aa18.37■□□□□ 0.53
TCN2-205ENST00000450638 TDRD9Q8NDG6 1382 aaKnown RBP18.32■□□□□ 0.52
TCN2-205ENST00000450638 ARHGAP35Q9NRY4 1499 aa18.32■□□□□ 0.52
TCN2-205ENST00000450638 CUL7Q14999 1698 aa18.3■□□□□ 0.52
TCN2-205ENST00000450638 WDR97A6NE52 1622 aa18.29■□□□□ 0.52
TCN2-205ENST00000450638 GAPVD1Q14C86 1478 aa18.29■□□□□ 0.52
TCN2-205ENST00000450638 MRC2Q9UBG0 1479 aa18.28■□□□□ 0.52
TCN2-205ENST00000450638 CCER1Q8TC90 406 aaPredicted RBP18.27■□□□□ 0.51
TCN2-205ENST00000450638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.25■□□□□ 0.51
TCN2-205ENST00000450638 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
TCN2-205ENST00000450638 TARBP1Q13395 1621 aaKnown RBP18.21■□□□□ 0.51
TCN2-205ENST00000450638 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
TCN2-205ENST00000450638 KANK4Q5T7N3 995 aaPredicted RBP18.18■□□□□ 0.5
TCN2-205ENST00000450638 ERCC6Q03468 1493 aa18.18■□□□□ 0.5
TCN2-205ENST00000450638 HNRNPUL2Q1KMD3 747 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms