RNA–Protein interactions for RNA: ENST00000450501.5

COPS7B-215, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-215ENST00000450501 NISCHQ9Y2I1 1504 aa45.35■■■■■ 4.85
COPS7B-215ENST00000450501 CCDC180Q9P1Z9 1646 aa40.31■■■■■ 4.04
COPS7B-215ENST00000450501 ABCC9O60706 1549 aa39.27■■■■□ 3.88
COPS7B-215ENST00000450501 RB1CC1Q8TDY2 1594 aa37.88■■■■□ 3.65
COPS7B-215ENST00000450501 NACADO15069 1562 aa37.85■■■■□ 3.65
COPS7B-215ENST00000450501 DCAF8L2P0C7V8 631 aa37.85■■■■□ 3.65
COPS7B-215ENST00000450501 ZCCHC6Q5VYS8 1495 aaKnown RBP37.8■■■■□ 3.64
COPS7B-215ENST00000450501 MYO15BQ96JP2 1530 aa37.67■■■■□ 3.62
COPS7B-215ENST00000450501 DCAF1Q9Y4B6 1507 aa37.55■■■■□ 3.6
COPS7B-215ENST00000450501 UNC13AQ9UPW8 1703 aa37.02■■■■□ 3.52
COPS7B-215ENST00000450501 SCRIBQ14160 1630 aa36.75■■■■□ 3.47
COPS7B-215ENST00000450501 PABPN1Q86U42 306 aaKnown RBP eCLIP36.7■■■■□ 3.47
COPS7B-215ENST00000450501 BICRAQ9NZM4 1560 aa36.68■■■■□ 3.46
COPS7B-215ENST00000450501 SHROOM4Q9ULL8 1493 aa36.36■■■■□ 3.41
COPS7B-215ENST00000450501 DNAJC5BQ9UF47 199 aa35.9■■■■□ 3.34
COPS7B-215ENST00000450501 EIF4G1Q04637 1599 aaKnown RBP35.72■■■■□ 3.31
COPS7B-215ENST00000450501 AEBP2Q6ZN18 517 aaPredicted RBP35.57■■■■□ 3.28
COPS7B-215ENST00000450501 CC2D2AQ9P2K1 1620 aa35.55■■■■□ 3.28
COPS7B-215ENST00000450501 CECR2Q9BXF3 1484 aa35.29■■■■□ 3.24
COPS7B-215ENST00000450501 SMARCA4P51532 1647 aa35.17■■■■□ 3.22
COPS7B-215ENST00000450501 BAZ1AQ9NRL2 1556 aaPredicted RBP35.17■■■■□ 3.22
COPS7B-215ENST00000450501 SMARCA2P51531 1590 aa34.94■■■■□ 3.18
COPS7B-215ENST00000450501 MROH2BQ7Z745 1585 aa34.93■■■■□ 3.18
COPS7B-215ENST00000450501 ATAD2BQ9ULI0 1458 aa34.93■■■■□ 3.18
COPS7B-215ENST00000450501 NCAPD3P42695 1498 aa34.9■■■■□ 3.18
COPS7B-215ENST00000450501 PEG3Q9GZU2 1588 aa34.83■■■■□ 3.17
COPS7B-215ENST00000450501 HMGXB3Q12766 1538 aa34.76■■■■□ 3.16
COPS7B-215ENST00000450501 BAZ1BQ9UIG0 1483 aaKnown RBP34.68■■■■□ 3.14
COPS7B-215ENST00000450501 WIZO95785 1651 aa34.59■■■■□ 3.13
COPS7B-215ENST00000450501 RSF1Q96T23 1441 aaPredicted RBP34.58■■■■□ 3.13
COPS7B-215ENST00000450501 TOP2AP11388 1531 aaKnown RBP34.23■■■■□ 3.07
COPS7B-215ENST00000450501 NESP48681 1621 aa34.01■■■■□ 3.03
COPS7B-215ENST00000450501 LAMC3Q9Y6N6 1575 aa33.99■■■■□ 3.03
COPS7B-215ENST00000450501 CADPSQ9ULU8 1353 aa33.9■■■■□ 3.02
COPS7B-215ENST00000450501 ERCC6Q03468 1493 aa33.88■■■■□ 3.01
COPS7B-215ENST00000450501 CCDC88BA6NC98 1476 aa33.82■■■■□ 3
COPS7B-215ENST00000450501 SUPT5HO00267 1087 aaKnown RBP33.81■■■■□ 3
COPS7B-215ENST00000450501 PDS5BQ9NTI5 1447 aa33.77■■■■□ 3
COPS7B-215ENST00000450501 CHIC1Q5VXU3 224 aa33.75■■■□□ 2.99
COPS7B-215ENST00000450501 CFTRP13569 1480 aa33.72■■■□□ 2.99
COPS7B-215ENST00000450501 KIF21AQ7Z4S6 1674 aa33.64■■■□□ 2.98
COPS7B-215ENST00000450501 PRDM2Q13029 1718 aa33.53■■■□□ 2.96
COPS7B-215ENST00000450501 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
COPS7B-215ENST00000450501 THOC2Q8NI27 1593 aaKnown RBP33.49■■■□□ 2.95
COPS7B-215ENST00000450501 CUX2O14529 1486 aa33.47■■■□□ 2.95
COPS7B-215ENST00000450501 CEP164Q9UPV0 1460 aa33.47■■■□□ 2.95
COPS7B-215ENST00000450501 MRC2Q9UBG0 1479 aa33.38■■■□□ 2.93
COPS7B-215ENST00000450501 WDR62O43379 1518 aa33.27■■■□□ 2.92
COPS7B-215ENST00000450501 URB2Q14146 1524 aaKnown RBP33.15■■■□□ 2.9
COPS7B-215ENST00000450501 ABCC8Q09428 1581 aa33.03■■■□□ 2.88
COPS7B-215ENST00000450501 TOPBP1Q92547 1522 aa32.99■■■□□ 2.87
COPS7B-215ENST00000450501 DNMBPQ6XZF7 1577 aa32.97■■■□□ 2.87
COPS7B-215ENST00000450501 CUX1P39880 1505 aa32.77■■■□□ 2.84
COPS7B-215ENST00000450501 IFT140Q96RY7 1462 aa32.76■■■□□ 2.84
COPS7B-215ENST00000450501 POLA1P09884 1462 aaPredicted RBP32.71■■■□□ 2.83
COPS7B-215ENST00000450501 FGD5Q6ZNL6 1462 aa32.66■■■□□ 2.82
COPS7B-215ENST00000450501 WRNQ14191 1432 aaPredicted RBP eCLIP32.63■■■□□ 2.81
COPS7B-215ENST00000450501 TARBP1Q13395 1621 aaKnown RBP32.62■■■□□ 2.81
COPS7B-215ENST00000450501 SOGA1O94964 1423 aa32.59■■■□□ 2.81
COPS7B-215ENST00000450501 ZNF608Q9ULD9 1512 aaPredicted RBP32.56■■■□□ 2.8
COPS7B-215ENST00000450501 TOP2BQ02880 1626 aa32.55■■■□□ 2.8
COPS7B-215ENST00000450501 RAD54L2Q9Y4B4 1467 aa32.55■■■□□ 2.8
COPS7B-215ENST00000450501 BIVM-ERCC5R4GMW8 1640 aa32.55■■■□□ 2.8
COPS7B-215ENST00000450501 SYNJ1O43426 1573 aa32.53■■■□□ 2.8
COPS7B-215ENST00000450501 EIF4G3O43432 1585 aaKnown RBP32.48■■■□□ 2.79
COPS7B-215ENST00000450501 AQRO60306 1485 aaKnown RBP eCLIP32.42■■■□□ 2.78
COPS7B-215ENST00000450501 WDR97A6NE52 1622 aa32.4■■■□□ 2.78
COPS7B-215ENST00000450501 TDRD9Q8NDG6 1382 aaKnown RBP32.37■■■□□ 2.77
COPS7B-215ENST00000450501 ABCA10Q8WWZ4 1543 aa32.36■■■□□ 2.77
COPS7B-215ENST00000450501 DNAJC5Q9H3Z4 198 aa32.28■■■□□ 2.76
COPS7B-215ENST00000450501 GAPVD1Q14C86 1478 aa32.23■■■□□ 2.75
COPS7B-215ENST00000450501 ABCA5Q8WWZ7 1642 aa32.21■■■□□ 2.75
COPS7B-215ENST00000450501 GRIN2BQ13224 1484 aa32.2■■■□□ 2.75
COPS7B-215ENST00000450501 PBRM1Q86U86 1689 aa32.17■■■□□ 2.74
COPS7B-215ENST00000450501 SNAPC4Q5SXM2 1469 aa32.12■■■□□ 2.73
COPS7B-215ENST00000450501 MAGI1Q96QZ7 1491 aaPredicted RBP32.11■■■□□ 2.73
COPS7B-215ENST00000450501 OSCARQ8IYS5 282 aa32.11■■■□□ 2.73
COPS7B-215ENST00000450501 CHD1O14646 1710 aa32.06■■■□□ 2.72
COPS7B-215ENST00000450501 FBLN2P98095 1184 aa32.02■■■□□ 2.72
COPS7B-215ENST00000450501 ERICH3Q5RHP9 1530 aa31.98■■■□□ 2.71
COPS7B-215ENST00000450501 SYNJ2O15056 1496 aa31.97■■■□□ 2.71
COPS7B-215ENST00000450501 CHMP7Q8WUX9 453 aaPredicted RBP31.96■■■□□ 2.71
COPS7B-215ENST00000450501 KIF27Q86VH2 1401 aa31.95■■■□□ 2.71
COPS7B-215ENST00000450501 TRIM41Q8WV44 630 aa31.95■■■□□ 2.71
COPS7B-215ENST00000450501 ADAMTS12P58397 1594 aa31.9■■■□□ 2.7
COPS7B-215ENST00000450501 FHAD1B1AJZ9 1412 aa31.85■■■□□ 2.69
COPS7B-215ENST00000450501 GRIN2AQ12879 1464 aa31.78■■■□□ 2.68
COPS7B-215ENST00000450501 IGF1RP08069 1367 aa31.78■■■□□ 2.68
COPS7B-215ENST00000450501 CUL7Q14999 1698 aa31.73■■■□□ 2.67
COPS7B-215ENST00000450501 CLASP1Q7Z460 1538 aa31.7■■■□□ 2.66
COPS7B-215ENST00000450501 RUSC2Q8N2Y8 1516 aa31.65■■■□□ 2.66
COPS7B-215ENST00000450501 NUP160Q12769 1436 aa31.63■■■□□ 2.65
COPS7B-215ENST00000450501 CARMIL1Q5VZK9 1371 aa31.61■■■□□ 2.65
COPS7B-215ENST00000450501 CEP170Q5SW79 1584 aa31.6■■■□□ 2.65
COPS7B-215ENST00000450501 ARHGEF11O15085 1522 aa31.57■■■□□ 2.64
COPS7B-215ENST00000450501 RIMBP3CA6NJZ7 1639 aa31.57■■■□□ 2.64
COPS7B-215ENST00000450501 RIMBP3BA6NNM3 1639 aa31.57■■■□□ 2.64
COPS7B-215ENST00000450501 RIMBP3Q9UFD9 1639 aa31.57■■■□□ 2.64
COPS7B-215ENST00000450501 RAPGEF2Q9Y4G8 1499 aa31.44■■■□□ 2.62
COPS7B-215ENST00000450501 EEA1Q15075 1411 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms