RNA–Protein interactions for RNA: ENST00000449850.1

KDM1B-202, Transcript of lysine demethylase 1B, humanhuman

TSL 5

Gene KDM1B, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-202ENST00000449850 NISCHQ9Y2I1 1504 aa27.58■■■□□ 2.01
KDM1B-202ENST00000449850 CCDC180Q9P1Z9 1646 aa24.03■■□□□ 1.44
KDM1B-202ENST00000449850 ZCCHC6Q5VYS8 1495 aaKnown RBP23.15■■□□□ 1.3
KDM1B-202ENST00000449850 ABCC9O60706 1549 aa22.93■■□□□ 1.26
KDM1B-202ENST00000449850 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
KDM1B-202ENST00000449850 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
KDM1B-202ENST00000449850 MYO15BQ96JP2 1530 aa22.56■■□□□ 1.2
KDM1B-202ENST00000449850 NACADO15069 1562 aa22.45■■□□□ 1.18
KDM1B-202ENST00000449850 SHROOM4Q9ULL8 1493 aa22.45■■□□□ 1.18
KDM1B-202ENST00000449850 RB1CC1Q8TDY2 1594 aa22.28■■□□□ 1.16
KDM1B-202ENST00000449850 SCRIBQ14160 1630 aa22.14■■□□□ 1.13
KDM1B-202ENST00000449850 UNC13AQ9UPW8 1703 aa21.82■■□□□ 1.08
KDM1B-202ENST00000449850 BICRAQ9NZM4 1560 aa21.67■■□□□ 1.06
KDM1B-202ENST00000449850 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
KDM1B-202ENST00000449850 SUPT5HO00267 1087 aaKnown RBP21.53■■□□□ 1.04
KDM1B-202ENST00000449850 CECR2Q9BXF3 1484 aa21.49■■□□□ 1.03
KDM1B-202ENST00000449850 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
KDM1B-202ENST00000449850 MROH2BQ7Z745 1585 aa21.33■■□□□ 1.01
KDM1B-202ENST00000449850 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
KDM1B-202ENST00000449850 SMARCA4P51532 1647 aa21.21■□□□□ 0.99
KDM1B-202ENST00000449850 WIZO95785 1651 aa21.12■□□□□ 0.97
KDM1B-202ENST00000449850 EIF4G1Q04637 1599 aaKnown RBP21■□□□□ 0.95
KDM1B-202ENST00000449850 PEG3Q9GZU2 1588 aa20.96■□□□□ 0.95
KDM1B-202ENST00000449850 ATAD2BQ9ULI0 1458 aa20.93■□□□□ 0.94
KDM1B-202ENST00000449850 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
KDM1B-202ENST00000449850 SMARCA2P51531 1590 aa20.86■□□□□ 0.93
KDM1B-202ENST00000449850 BAZ1BQ9UIG0 1483 aaKnown RBP20.77■□□□□ 0.92
KDM1B-202ENST00000449850 NCAPD3P42695 1498 aa20.76■□□□□ 0.91
KDM1B-202ENST00000449850 CC2D2AQ9P2K1 1620 aa20.72■□□□□ 0.91
KDM1B-202ENST00000449850 CCDC88BA6NC98 1476 aa20.7■□□□□ 0.9
KDM1B-202ENST00000449850 HMGXB3Q12766 1538 aa20.69■□□□□ 0.9
KDM1B-202ENST00000449850 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
KDM1B-202ENST00000449850 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
KDM1B-202ENST00000449850 CFTRP13569 1480 aa20.27■□□□□ 0.84
KDM1B-202ENST00000449850 CADPSQ9ULU8 1353 aa20.23■□□□□ 0.83
KDM1B-202ENST00000449850 ABCC8Q09428 1581 aa20.22■□□□□ 0.83
KDM1B-202ENST00000449850 TRIM41Q8WV44 630 aa20.22■□□□□ 0.83
KDM1B-202ENST00000449850 NESP48681 1621 aa20.11■□□□□ 0.81
KDM1B-202ENST00000449850 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
KDM1B-202ENST00000449850 PRDM2Q13029 1718 aa20.04■□□□□ 0.8
KDM1B-202ENST00000449850 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
KDM1B-202ENST00000449850 SYNJ1O43426 1573 aa20.02■□□□□ 0.8
KDM1B-202ENST00000449850 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
KDM1B-202ENST00000449850 CUX1P39880 1505 aa19.94■□□□□ 0.78
KDM1B-202ENST00000449850 TOP2BQ02880 1626 aa19.93■□□□□ 0.78
KDM1B-202ENST00000449850 PDS5BQ9NTI5 1447 aa19.9■□□□□ 0.78
KDM1B-202ENST00000449850 BIVM-ERCC5R4GMW8 1640 aa19.89■□□□□ 0.78
KDM1B-202ENST00000449850 FAM9AQ8IZU1 332 aaPredicted RBP19.87■□□□□ 0.77
KDM1B-202ENST00000449850 CEP164Q9UPV0 1460 aa19.85■□□□□ 0.77
KDM1B-202ENST00000449850 SOGA1O94964 1423 aa19.85■□□□□ 0.77
KDM1B-202ENST00000449850 KIF21AQ7Z4S6 1674 aa19.79■□□□□ 0.76
KDM1B-202ENST00000449850 LOC105371045A0A1W2PR82 267 aa19.78■□□□□ 0.76
KDM1B-202ENST00000449850 RUSC2Q8N2Y8 1516 aa19.78■□□□□ 0.76
KDM1B-202ENST00000449850 URB2Q14146 1524 aaKnown RBP19.77■□□□□ 0.75
KDM1B-202ENST00000449850 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
KDM1B-202ENST00000449850 DNMBPQ6XZF7 1577 aa19.76■□□□□ 0.75
KDM1B-202ENST00000449850 FGD5Q6ZNL6 1462 aa19.73■□□□□ 0.75
KDM1B-202ENST00000449850 EEA1Q15075 1411 aa19.71■□□□□ 0.75
KDM1B-202ENST00000449850 POLA1P09884 1462 aaPredicted RBP19.67■□□□□ 0.74
KDM1B-202ENST00000449850 CSRNP3Q8WYN3 585 aa19.66■□□□□ 0.74
KDM1B-202ENST00000449850 MRC2Q9UBG0 1479 aa19.65■□□□□ 0.74
KDM1B-202ENST00000449850 ERCC6Q03468 1493 aa19.63■□□□□ 0.73
KDM1B-202ENST00000449850 RAD54L2Q9Y4B4 1467 aa19.62■□□□□ 0.73
KDM1B-202ENST00000449850 EHMT2Q96KQ7 1210 aa19.61■□□□□ 0.73
KDM1B-202ENST00000449850 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
KDM1B-202ENST00000449850 CUX2O14529 1486 aa19.58■□□□□ 0.72
KDM1B-202ENST00000449850 WDR62O43379 1518 aa19.56■□□□□ 0.72
KDM1B-202ENST00000449850 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
KDM1B-202ENST00000449850 THOC2Q8NI27 1593 aaKnown RBP19.53■□□□□ 0.72
KDM1B-202ENST00000449850 IGF1RP08069 1367 aa19.48■□□□□ 0.71
KDM1B-202ENST00000449850 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
KDM1B-202ENST00000449850 WDR97A6NE52 1622 aa19.46■□□□□ 0.71
KDM1B-202ENST00000449850 PRXQ9BXM0 1461 aa19.46■□□□□ 0.71
KDM1B-202ENST00000449850 KIF21BO75037 1637 aa19.45■□□□□ 0.7
KDM1B-202ENST00000449850 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
KDM1B-202ENST00000449850 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
KDM1B-202ENST00000449850 RAPGEF2Q9Y4G8 1499 aa19.43■□□□□ 0.7
KDM1B-202ENST00000449850 IFT140Q96RY7 1462 aa19.39■□□□□ 0.69
KDM1B-202ENST00000449850 ABCA5Q8WWZ7 1642 aa19.39■□□□□ 0.69
KDM1B-202ENST00000449850 TNIKQ9UKE5 1360 aa19.38■□□□□ 0.69
KDM1B-202ENST00000449850 UBTFP17480 764 aaKnown RBP19.37■□□□□ 0.69
KDM1B-202ENST00000449850 GAPVD1Q14C86 1478 aa19.37■□□□□ 0.69
KDM1B-202ENST00000449850 ERICH3Q5RHP9 1530 aa19.36■□□□□ 0.69
KDM1B-202ENST00000449850 CARMIL1Q5VZK9 1371 aa19.35■□□□□ 0.69
KDM1B-202ENST00000449850 ZNF608Q9ULD9 1512 aaPredicted RBP19.34■□□□□ 0.69
KDM1B-202ENST00000449850 AQRO60306 1485 aaKnown RBP eCLIP19.34■□□□□ 0.69
KDM1B-202ENST00000449850 CEP162Q5TB80 1403 aa19.28■□□□□ 0.68
KDM1B-202ENST00000449850 CUL7Q14999 1698 aa19.24■□□□□ 0.67
KDM1B-202ENST00000449850 GRIN2BQ13224 1484 aa19.23■□□□□ 0.67
KDM1B-202ENST00000449850 EIF4G3O43432 1585 aaKnown RBP19.22■□□□□ 0.67
KDM1B-202ENST00000449850 PBRM1Q86U86 1689 aa19.21■□□□□ 0.67
KDM1B-202ENST00000449850 FHAD1B1AJZ9 1412 aa19.15■□□□□ 0.66
KDM1B-202ENST00000449850 CLIP1P30622 1438 aa19.14■□□□□ 0.65
KDM1B-202ENST00000449850 ADAMTS12P58397 1594 aa19.14■□□□□ 0.65
KDM1B-202ENST00000449850 SNAPC4Q5SXM2 1469 aa19.13■□□□□ 0.65
KDM1B-202ENST00000449850 RANGAP1P46060 587 aaPredicted RBP19.13■□□□□ 0.65
KDM1B-202ENST00000449850 MAGI1Q96QZ7 1491 aaPredicted RBP19.07■□□□□ 0.64
KDM1B-202ENST00000449850 ARHGAP35Q9NRY4 1499 aa19.02■□□□□ 0.63
KDM1B-202ENST00000449850 SYNJ2O15056 1496 aa19.01■□□□□ 0.63
KDM1B-202ENST00000449850 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms