RNA–Protein interactions for RNA: ENST00000448660.5

MMS19-213, Transcript of MMS19 homolog, cytosolic iron-sulfur assembly component, humanhuman

TSL 5

Gene MMS19, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19-213ENST00000448660 NISCHQ9Y2I1 1504 aa37.93■■■■□ 3.66
MMS19-213ENST00000448660 CCDC180Q9P1Z9 1646 aa33.11■■■□□ 2.89
MMS19-213ENST00000448660 ZCCHC6Q5VYS8 1495 aaKnown RBP31.78■■■□□ 2.68
MMS19-213ENST00000448660 ABCC9O60706 1549 aa31.54■■■□□ 2.64
MMS19-213ENST00000448660 DCAF8L2P0C7V8 631 aa31.44■■■□□ 2.62
MMS19-213ENST00000448660 DCAF1Q9Y4B6 1507 aa31.41■■■□□ 2.62
MMS19-213ENST00000448660 MYO15BQ96JP2 1530 aa31.15■■■□□ 2.58
MMS19-213ENST00000448660 NACADO15069 1562 aa30.99■■■□□ 2.55
MMS19-213ENST00000448660 RB1CC1Q8TDY2 1594 aa30.73■■■□□ 2.51
MMS19-213ENST00000448660 SHROOM4Q9ULL8 1493 aa30.7■■■□□ 2.51
MMS19-213ENST00000448660 SCRIBQ14160 1630 aa30.36■■■□□ 2.45
MMS19-213ENST00000448660 UNC13AQ9UPW8 1703 aa29.93■■■□□ 2.38
MMS19-213ENST00000448660 BICRAQ9NZM4 1560 aa29.78■■■□□ 2.36
MMS19-213ENST00000448660 PABPN1Q86U42 306 aaKnown RBP eCLIP29.77■■■□□ 2.36
MMS19-213ENST00000448660 SUPT5HO00267 1087 aaKnown RBP29.51■■■□□ 2.31
MMS19-213ENST00000448660 CECR2Q9BXF3 1484 aa29.48■■■□□ 2.31
MMS19-213ENST00000448660 RSF1Q96T23 1441 aaPredicted RBP29.36■■■□□ 2.29
MMS19-213ENST00000448660 BAZ1AQ9NRL2 1556 aaPredicted RBP29.29■■■□□ 2.28
MMS19-213ENST00000448660 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.27
MMS19-213ENST00000448660 SMARCA4P51532 1647 aa29.14■■■□□ 2.26
MMS19-213ENST00000448660 WIZO95785 1651 aa28.95■■■□□ 2.22
MMS19-213ENST00000448660 EIF4G1Q04637 1599 aaKnown RBP28.9■■■□□ 2.22
MMS19-213ENST00000448660 PEG3Q9GZU2 1588 aa28.85■■■□□ 2.21
MMS19-213ENST00000448660 ATAD2BQ9ULI0 1458 aa28.81■■■□□ 2.2
MMS19-213ENST00000448660 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
MMS19-213ENST00000448660 TOP2AP11388 1531 aaKnown RBP28.7■■■□□ 2.19
MMS19-213ENST00000448660 NCAPD3P42695 1498 aa28.65■■■□□ 2.18
MMS19-213ENST00000448660 BAZ1BQ9UIG0 1483 aaKnown RBP28.59■■■□□ 2.17
MMS19-213ENST00000448660 CC2D2AQ9P2K1 1620 aa28.52■■■□□ 2.16
MMS19-213ENST00000448660 HMGXB3Q12766 1538 aa28.49■■■□□ 2.15
MMS19-213ENST00000448660 CCDC88BA6NC98 1476 aa28.46■■■□□ 2.15
MMS19-213ENST00000448660 CHIC1Q5VXU3 224 aa28.19■■■□□ 2.1
MMS19-213ENST00000448660 DNAJC5BQ9UF47 199 aa28.12■■■□□ 2.09
MMS19-213ENST00000448660 CFTRP13569 1480 aa27.91■■■□□ 2.06
MMS19-213ENST00000448660 CADPSQ9ULU8 1353 aa27.9■■■□□ 2.06
MMS19-213ENST00000448660 TRIM41Q8WV44 630 aa27.83■■■□□ 2.05
MMS19-213ENST00000448660 ABCC8Q09428 1581 aa27.66■■■□□ 2.02
MMS19-213ENST00000448660 WRNQ14191 1432 aaPredicted RBP eCLIP27.63■■■□□ 2.01
MMS19-213ENST00000448660 LAMC3Q9Y6N6 1575 aa27.62■■■□□ 2.01
MMS19-213ENST00000448660 NESP48681 1621 aa27.6■■■□□ 2.01
MMS19-213ENST00000448660 PRDM2Q13029 1718 aa27.56■■■□□ 2
MMS19-213ENST00000448660 FANCD2Q9BXW9 1451 aa27.51■■■□□ 2
MMS19-213ENST00000448660 PDS5BQ9NTI5 1447 aa27.5■■□□□ 1.99
MMS19-213ENST00000448660 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
MMS19-213ENST00000448660 TOP2BQ02880 1626 aa27.38■■□□□ 1.97
MMS19-213ENST00000448660 CUX1P39880 1505 aa27.36■■□□□ 1.97
MMS19-213ENST00000448660 CEP164Q9UPV0 1460 aa27.34■■□□□ 1.97
MMS19-213ENST00000448660 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.97
MMS19-213ENST00000448660 FAM9AQ8IZU1 332 aaPredicted RBP27.23■■□□□ 1.95
MMS19-213ENST00000448660 DNMBPQ6XZF7 1577 aa27.2■■□□□ 1.94
MMS19-213ENST00000448660 SOGA1O94964 1423 aa27.19■■□□□ 1.94
MMS19-213ENST00000448660 TOPBP1Q92547 1522 aa27.18■■□□□ 1.94
MMS19-213ENST00000448660 KIF21AQ7Z4S6 1674 aa27.17■■□□□ 1.94
MMS19-213ENST00000448660 EEA1Q15075 1411 aa27.16■■□□□ 1.94
MMS19-213ENST00000448660 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
MMS19-213ENST00000448660 FGD5Q6ZNL6 1462 aa27.12■■□□□ 1.93
MMS19-213ENST00000448660 MRC2Q9UBG0 1479 aa27.1■■□□□ 1.93
MMS19-213ENST00000448660 CSRNP3Q8WYN3 585 aa27.09■■□□□ 1.93
MMS19-213ENST00000448660 RUSC2Q8N2Y8 1516 aa27.09■■□□□ 1.93
MMS19-213ENST00000448660 ERCC6Q03468 1493 aa27.07■■□□□ 1.92
MMS19-213ENST00000448660 LOC105371045A0A1W2PR82 267 aa27.07■■□□□ 1.92
MMS19-213ENST00000448660 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
MMS19-213ENST00000448660 KIF27Q86VH2 1401 aa26.99■■□□□ 1.91
MMS19-213ENST00000448660 RAD54L2Q9Y4B4 1467 aa26.94■■□□□ 1.9
MMS19-213ENST00000448660 WDR62O43379 1518 aa26.94■■□□□ 1.9
MMS19-213ENST00000448660 CUX2O14529 1486 aa26.92■■□□□ 1.9
MMS19-213ENST00000448660 ABCA10Q8WWZ4 1543 aa26.9■■□□□ 1.9
MMS19-213ENST00000448660 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
MMS19-213ENST00000448660 IGF1RP08069 1367 aa26.82■■□□□ 1.88
MMS19-213ENST00000448660 EHMT2Q96KQ7 1210 aa26.78■■□□□ 1.88
MMS19-213ENST00000448660 TARBP1Q13395 1621 aaKnown RBP26.76■■□□□ 1.87
MMS19-213ENST00000448660 IFT140Q96RY7 1462 aa26.76■■□□□ 1.87
MMS19-213ENST00000448660 TDRD9Q8NDG6 1382 aaKnown RBP26.73■■□□□ 1.87
MMS19-213ENST00000448660 PRXQ9BXM0 1461 aa26.73■■□□□ 1.87
MMS19-213ENST00000448660 KIF21BO75037 1637 aa26.72■■□□□ 1.87
MMS19-213ENST00000448660 GOLGA3Q08378 1498 aa26.71■■□□□ 1.87
MMS19-213ENST00000448660 WDR97A6NE52 1622 aa26.71■■□□□ 1.87
MMS19-213ENST00000448660 UBTFP17480 764 aaKnown RBP26.67■■□□□ 1.86
MMS19-213ENST00000448660 GAPVD1Q14C86 1478 aa26.67■■□□□ 1.86
MMS19-213ENST00000448660 TNIKQ9UKE5 1360 aa26.66■■□□□ 1.86
MMS19-213ENST00000448660 CARMIL1Q5VZK9 1371 aa26.65■■□□□ 1.86
MMS19-213ENST00000448660 ABCA5Q8WWZ7 1642 aa26.63■■□□□ 1.85
MMS19-213ENST00000448660 RAPGEF2Q9Y4G8 1499 aa26.62■■□□□ 1.85
MMS19-213ENST00000448660 ERICH3Q5RHP9 1530 aa26.61■■□□□ 1.85
MMS19-213ENST00000448660 AQRO60306 1485 aaKnown RBP eCLIP26.59■■□□□ 1.856e-8■■■■■ 26.8
MMS19-213ENST00000448660 ZNF608Q9ULD9 1512 aaPredicted RBP26.56■■□□□ 1.84
MMS19-213ENST00000448660 GRIN2BQ13224 1484 aa26.51■■□□□ 1.83
MMS19-213ENST00000448660 CUL7Q14999 1698 aa26.48■■□□□ 1.83
MMS19-213ENST00000448660 FHAD1B1AJZ9 1412 aa26.4■■□□□ 1.82
MMS19-213ENST00000448660 CEP162Q5TB80 1403 aa26.4■■□□□ 1.82
MMS19-213ENST00000448660 EIF4G3O43432 1585 aaKnown RBP26.39■■□□□ 1.82
MMS19-213ENST00000448660 PBRM1Q86U86 1689 aa26.38■■□□□ 1.81
MMS19-213ENST00000448660 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
MMS19-213ENST00000448660 MAGI1Q96QZ7 1491 aaPredicted RBP26.3■■□□□ 1.8
MMS19-213ENST00000448660 ADAMTS12P58397 1594 aa26.29■■□□□ 1.8
MMS19-213ENST00000448660 CLIP1P30622 1438 aa26.29■■□□□ 1.8
MMS19-213ENST00000448660 RANGAP1P46060 587 aaPredicted RBP26.21■■□□□ 1.79
MMS19-213ENST00000448660 CHMP7Q8WUX9 453 aaPredicted RBP26.21■■□□□ 1.79
MMS19-213ENST00000448660 SYNJ2O15056 1496 aa26.2■■□□□ 1.78
MMS19-213ENST00000448660 GRIN2AQ12879 1464 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms