RNA–Protein interactions for RNA: ENST00000448120.6

TULP3-202, Transcript of tubby like protein 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TULP3, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP3-202ENST00000448120 NISCHQ9Y2I1 1504 aa24.41■■□□□ 1.5
TULP3-202ENST00000448120 ABCC9O60706 1549 aa21.61■■□□□ 1.05
TULP3-202ENST00000448120 CCDC180Q9P1Z9 1646 aa21.59■■□□□ 1.05
TULP3-202ENST00000448120 DCAF8L2P0C7V8 631 aa20.96■□□□□ 0.95
TULP3-202ENST00000448120 RB1CC1Q8TDY2 1594 aa20.53■□□□□ 0.88
TULP3-202ENST00000448120 NACADO15069 1562 aa20.42■□□□□ 0.86
TULP3-202ENST00000448120 PABPN1Q86U42 306 aaKnown RBP eCLIP20.3■□□□□ 0.84
TULP3-202ENST00000448120 ZCCHC6Q5VYS8 1495 aaKnown RBP20.26■□□□□ 0.83
TULP3-202ENST00000448120 MYO15BQ96JP2 1530 aa20.11■□□□□ 0.81
TULP3-202ENST00000448120 DCAF1Q9Y4B6 1507 aa20.01■□□□□ 0.79
TULP3-202ENST00000448120 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
TULP3-202ENST00000448120 DNAJC5BQ9UF47 199 aa19.98■□□□□ 0.79
TULP3-202ENST00000448120 SCRIBQ14160 1630 aa19.96■□□□□ 0.79
TULP3-202ENST00000448120 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
TULP3-202ENST00000448120 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.73
TULP3-202ENST00000448120 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
TULP3-202ENST00000448120 CC2D2AQ9P2K1 1620 aa19.4■□□□□ 0.7
TULP3-202ENST00000448120 CECR2Q9BXF3 1484 aa19.36■□□□□ 0.69
TULP3-202ENST00000448120 SMARCA4P51532 1647 aa18.95■□□□□ 0.62
TULP3-202ENST00000448120 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
TULP3-202ENST00000448120 BAZ1AQ9NRL2 1556 aaPredicted RBP18.92■□□□□ 0.62
TULP3-202ENST00000448120 NCAPD3P42695 1498 aa18.87■□□□□ 0.61
TULP3-202ENST00000448120 MROH2BQ7Z745 1585 aa18.87■□□□□ 0.61
TULP3-202ENST00000448120 SMARCA2P51531 1590 aa18.85■□□□□ 0.61
TULP3-202ENST00000448120 BAZ1BQ9UIG0 1483 aaKnown RBP18.82■□□□□ 0.6
TULP3-202ENST00000448120 HMGXB3Q12766 1538 aa18.71■□□□□ 0.59
TULP3-202ENST00000448120 WIZO95785 1651 aa18.67■□□□□ 0.58
TULP3-202ENST00000448120 ERCC6Q03468 1493 aa18.65■□□□□ 0.58
TULP3-202ENST00000448120 PEG3Q9GZU2 1588 aa18.64■□□□□ 0.57
TULP3-202ENST00000448120 NESP48681 1621 aa18.63■□□□□ 0.57
TULP3-202ENST00000448120 RSF1Q96T23 1441 aaPredicted RBP18.61■□□□□ 0.57
TULP3-202ENST00000448120 CADPSQ9ULU8 1353 aa18.41■□□□□ 0.54
TULP3-202ENST00000448120 SUPT5HO00267 1087 aaKnown RBP18.4■□□□□ 0.54
TULP3-202ENST00000448120 LAMC3Q9Y6N6 1575 aa18.38■□□□□ 0.53
TULP3-202ENST00000448120 PDS5BQ9NTI5 1447 aa18.38■□□□□ 0.53
TULP3-202ENST00000448120 TOP2AP11388 1531 aaKnown RBP18.37■□□□□ 0.53
TULP3-202ENST00000448120 KIF21AQ7Z4S6 1674 aa18.28■□□□□ 0.52
TULP3-202ENST00000448120 CUX2O14529 1486 aa18.28■□□□□ 0.52
TULP3-202ENST00000448120 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
TULP3-202ENST00000448120 FANCD2Q9BXW9 1451 aa18.21■□□□□ 0.51
TULP3-202ENST00000448120 CFTRP13569 1480 aa18.21■□□□□ 0.51
TULP3-202ENST00000448120 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
TULP3-202ENST00000448120 THOC2Q8NI27 1593 aaKnown RBP18.18■□□□□ 0.5
TULP3-202ENST00000448120 MRC2Q9UBG0 1479 aa18.15■□□□□ 0.5
TULP3-202ENST00000448120 DNAJC5Q9H3Z4 198 aa18.04■□□□□ 0.48
TULP3-202ENST00000448120 WDR62O43379 1518 aa18.02■□□□□ 0.47
TULP3-202ENST00000448120 URB2Q14146 1524 aaKnown RBP18■□□□□ 0.47
TULP3-202ENST00000448120 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
TULP3-202ENST00000448120 TOPBP1Q92547 1522 aa17.87■□□□□ 0.45
TULP3-202ENST00000448120 ABCC8Q09428 1581 aa17.8■□□□□ 0.44
TULP3-202ENST00000448120 ZNF608Q9ULD9 1512 aaPredicted RBP17.8■□□□□ 0.44
TULP3-202ENST00000448120 DNMBPQ6XZF7 1577 aa17.78■□□□□ 0.44
TULP3-202ENST00000448120 IFT140Q96RY7 1462 aa17.77■□□□□ 0.43
TULP3-202ENST00000448120 FBLN2P98095 1184 aa17.76■□□□□ 0.43
TULP3-202ENST00000448120 RAD54L2Q9Y4B4 1467 aa17.74■□□□□ 0.43
TULP3-202ENST00000448120 AQRO60306 1485 aaKnown RBP eCLIP17.73■□□□□ 0.433e-7■■■■■ 30.5
TULP3-202ENST00000448120 POLA1P09884 1462 aaPredicted RBP17.73■□□□□ 0.43
TULP3-202ENST00000448120 SOGA1O94964 1423 aa17.73■□□□□ 0.43
TULP3-202ENST00000448120 OSCARQ8IYS5 282 aa17.73■□□□□ 0.43
TULP3-202ENST00000448120 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
TULP3-202ENST00000448120 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
TULP3-202ENST00000448120 CUX1P39880 1505 aa17.68■□□□□ 0.42
TULP3-202ENST00000448120 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
TULP3-202ENST00000448120 EIF4G3O43432 1585 aaKnown RBP17.62■□□□□ 0.41
TULP3-202ENST00000448120 TARBP1Q13395 1621 aaKnown RBP17.6■□□□□ 0.41
TULP3-202ENST00000448120 WRNQ14191 1432 aaPredicted RBP eCLIP17.6■□□□□ 0.41
TULP3-202ENST00000448120 CHMP7Q8WUX9 453 aaPredicted RBP17.56■□□□□ 0.4
TULP3-202ENST00000448120 SYNJ1O43426 1573 aa17.5■□□□□ 0.39
TULP3-202ENST00000448120 SNAPC4Q5SXM2 1469 aa17.49■□□□□ 0.39
TULP3-202ENST00000448120 GAPVD1Q14C86 1478 aa17.48■□□□□ 0.39
TULP3-202ENST00000448120 GRIN2BQ13224 1484 aa17.45■□□□□ 0.38
TULP3-202ENST00000448120 TOP2BQ02880 1626 aa17.44■□□□□ 0.38
TULP3-202ENST00000448120 CHD1O14646 1710 aa17.44■□□□□ 0.38
TULP3-202ENST00000448120 ABCA10Q8WWZ4 1543 aa17.43■□□□□ 0.38
TULP3-202ENST00000448120 CYB5RLQ6IPT4 315 aa17.41■□□□□ 0.38
TULP3-202ENST00000448120 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.37
TULP3-202ENST00000448120 MAGI1Q96QZ7 1491 aaPredicted RBP17.37■□□□□ 0.37
TULP3-202ENST00000448120 WDR97A6NE52 1622 aa17.36■□□□□ 0.37
TULP3-202ENST00000448120 SYNJ2O15056 1496 aa17.34■□□□□ 0.37
TULP3-202ENST00000448120 PBRM1Q86U86 1689 aa17.34■□□□□ 0.37
TULP3-202ENST00000448120 ABCA5Q8WWZ7 1642 aa17.32■□□□□ 0.36
TULP3-202ENST00000448120 ARHGEF11O15085 1522 aa17.32■□□□□ 0.36
TULP3-202ENST00000448120 RIMBP3CA6NJZ7 1639 aa17.3■□□□□ 0.36
TULP3-202ENST00000448120 RIMBP3BA6NNM3 1639 aa17.3■□□□□ 0.36
TULP3-202ENST00000448120 RIMBP3Q9UFD9 1639 aa17.3■□□□□ 0.36
TULP3-202ENST00000448120 FHAD1B1AJZ9 1412 aa17.23■□□□□ 0.35
TULP3-202ENST00000448120 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
TULP3-202ENST00000448120 GRIN2AQ12879 1464 aa17.23■□□□□ 0.35
TULP3-202ENST00000448120 ADAMTS12P58397 1594 aa17.2■□□□□ 0.34
TULP3-202ENST00000448120 ERICH3Q5RHP9 1530 aa17.19■□□□□ 0.34
TULP3-202ENST00000448120 IGF1RP08069 1367 aa17.17■□□□□ 0.34
TULP3-202ENST00000448120 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
TULP3-202ENST00000448120 TTBK1Q5TCY1 1321 aaPredicted RBP17.16■□□□□ 0.34
TULP3-202ENST00000448120 CLASP1Q7Z460 1538 aa17.16■□□□□ 0.34
TULP3-202ENST00000448120 ARAP1Q96P48 1450 aa17.16■□□□□ 0.34
TULP3-202ENST00000448120 CEP170Q5SW79 1584 aa17.13■□□□□ 0.33
TULP3-202ENST00000448120 JPH4Q96JJ6 628 aa17.12■□□□□ 0.33
TULP3-202ENST00000448120 CARMIL1Q5VZK9 1371 aa17.11■□□□□ 0.33
TULP3-202ENST00000448120 RUSC2Q8N2Y8 1516 aa17.1■□□□□ 0.33
TULP3-202ENST00000448120 NUP160Q12769 1436 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms