RNA–Protein interactions for RNA: ENST00000448020.1

CHRM3-202, Transcript of cholinergic receptor muscarinic 3, humanhuman

TSL 2

Gene CHRM3, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM3-202ENST00000448020 NISCHQ9Y2I1 1504 aa19.73■□□□□ 0.75
CHRM3-202ENST00000448020 ABCC9O60706 1549 aa18.37■□□□□ 0.53
CHRM3-202ENST00000448020 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
CHRM3-202ENST00000448020 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
CHRM3-202ENST00000448020 RB1CC1Q8TDY2 1594 aa17.21■□□□□ 0.35
CHRM3-202ENST00000448020 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
CHRM3-202ENST00000448020 NACADO15069 1562 aa16.97■□□□□ 0.31
CHRM3-202ENST00000448020 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
CHRM3-202ENST00000448020 DCAF8L2P0C7V8 631 aa16.88■□□□□ 0.29
CHRM3-202ENST00000448020 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
CHRM3-202ENST00000448020 CC2D2AQ9P2K1 1620 aa16.56■□□□□ 0.24
CHRM3-202ENST00000448020 CECR2Q9BXF3 1484 aa16.54■□□□□ 0.24
CHRM3-202ENST00000448020 MYO15BQ96JP2 1530 aa16.54■□□□□ 0.24
CHRM3-202ENST00000448020 DNAJC5Q9H3Z4 198 aa16.4■□□□□ 0.22
CHRM3-202ENST00000448020 EIF4G1Q04637 1599 aaKnown RBP16.39■□□□□ 0.21
CHRM3-202ENST00000448020 SHROOM4Q9ULL8 1493 aa16.36■□□□□ 0.21
CHRM3-202ENST00000448020 SCRIBQ14160 1630 aa16.36■□□□□ 0.21
CHRM3-202ENST00000448020 ZCCHC6Q5VYS8 1495 aaKnown RBP16.27■□□□□ 0.19
CHRM3-202ENST00000448020 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
CHRM3-202ENST00000448020 CUX2O14529 1486 aa15.91■□□□□ 0.14
CHRM3-202ENST00000448020 ERCC6Q03468 1493 aa15.84■□□□□ 0.13
CHRM3-202ENST00000448020 NESP48681 1621 aa15.69■□□□□ 0.1
CHRM3-202ENST00000448020 NCAPD3P42695 1498 aa15.67■□□□□ 0.1
CHRM3-202ENST00000448020 ATAD2BQ9ULI0 1458 aa15.6■□□□□ 0.09
CHRM3-202ENST00000448020 TRIM41Q8WV44 630 aa15.59■□□□□ 0.09
CHRM3-202ENST00000448020 THOC2Q8NI27 1593 aaKnown RBP15.58■□□□□ 0.09
CHRM3-202ENST00000448020 HMGXB3Q12766 1538 aa15.53■□□□□ 0.08
CHRM3-202ENST00000448020 SMARCA4P51532 1647 aa15.51■□□□□ 0.07
CHRM3-202ENST00000448020 SMARCA2P51531 1590 aa15.5■□□□□ 0.07
CHRM3-202ENST00000448020 KIF21AQ7Z4S6 1674 aa15.48■□□□□ 0.07
CHRM3-202ENST00000448020 BAZ1BQ9UIG0 1483 aaKnown RBP15.43■□□□□ 0.06
CHRM3-202ENST00000448020 LAMC3Q9Y6N6 1575 aa15.4■□□□□ 0.06
CHRM3-202ENST00000448020 BAZ1AQ9NRL2 1556 aaPredicted RBP15.32■□□□□ 0.04
CHRM3-202ENST00000448020 PEG3Q9GZU2 1588 aa15.3■□□□□ 0.04
CHRM3-202ENST00000448020 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
CHRM3-202ENST00000448020 MROH2BQ7Z745 1585 aa15.26■□□□□ 0.03
CHRM3-202ENST00000448020 MRC2Q9UBG0 1479 aa15.24■□□□□ 0.03
CHRM3-202ENST00000448020 WDR62O43379 1518 aa15.22■□□□□ 0.03
CHRM3-202ENST00000448020 CADPSQ9ULU8 1353 aa15.19■□□□□ 0.02
CHRM3-202ENST00000448020 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
CHRM3-202ENST00000448020 CEP164Q9UPV0 1460 aa15.09■□□□□ 0.01
CHRM3-202ENST00000448020 WIZO95785 1651 aa15.08■□□□□ 0
CHRM3-202ENST00000448020 RIMBP3CA6NJZ7 1639 aa15.06■□□□□ 0
CHRM3-202ENST00000448020 RIMBP3BA6NNM3 1639 aa15.06■□□□□ 0
CHRM3-202ENST00000448020 RIMBP3Q9UFD9 1639 aa15.06■□□□□ 0
CHRM3-202ENST00000448020 FANCD2Q9BXW9 1451 aa15.05■□□□□ -0
CHRM3-202ENST00000448020 URB2Q14146 1524 aaKnown RBP14.99□□□□□ -0.01
CHRM3-202ENST00000448020 CFTRP13569 1480 aa14.94□□□□□ -0.02
CHRM3-202ENST00000448020 ARHGEF11O15085 1522 aa14.93□□□□□ -0.02
CHRM3-202ENST00000448020 ZNF608Q9ULD9 1512 aaPredicted RBP14.9□□□□□ -0.02
CHRM3-202ENST00000448020 CYB5RLQ6IPT4 315 aa14.84□□□□□ -0.03
CHRM3-202ENST00000448020 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
CHRM3-202ENST00000448020 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
CHRM3-202ENST00000448020 CHD1O14646 1710 aa14.78□□□□□ -0.04
CHRM3-202ENST00000448020 EIF4G3O43432 1585 aaKnown RBP14.78□□□□□ -0.04
CHRM3-202ENST00000448020 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
CHRM3-202ENST00000448020 ARAP1Q96P48 1450 aa14.78□□□□□ -0.04
CHRM3-202ENST00000448020 IFT140Q96RY7 1462 aa14.78□□□□□ -0.04
CHRM3-202ENST00000448020 RSF1Q96T23 1441 aaPredicted RBP14.75□□□□□ -0.05
CHRM3-202ENST00000448020 TOPBP1Q92547 1522 aa14.73□□□□□ -0.05
CHRM3-202ENST00000448020 AQRO60306 1485 aaKnown RBP eCLIP14.69□□□□□ -0.06
CHRM3-202ENST00000448020 FBLN2P98095 1184 aa14.66□□□□□ -0.06
CHRM3-202ENST00000448020 AEBP2Q6ZN18 517 aaPredicted RBP14.65□□□□□ -0.06
CHRM3-202ENST00000448020 TARBP1Q13395 1621 aaKnown RBP14.65□□□□□ -0.06
CHRM3-202ENST00000448020 CCDC88BA6NC98 1476 aa14.63□□□□□ -0.07
CHRM3-202ENST00000448020 DNMBPQ6XZF7 1577 aa14.63□□□□□ -0.07
CHRM3-202ENST00000448020 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
CHRM3-202ENST00000448020 POLA1P09884 1462 aaPredicted RBP14.56□□□□□ -0.08
CHRM3-202ENST00000448020 RAD54L2Q9Y4B4 1467 aa14.56□□□□□ -0.08
CHRM3-202ENST00000448020 CLASP1Q7Z460 1538 aa14.55□□□□□ -0.08
CHRM3-202ENST00000448020 SNAPC4Q5SXM2 1469 aa14.52□□□□□ -0.08
CHRM3-202ENST00000448020 TDRD9Q8NDG6 1382 aaKnown RBP14.52□□□□□ -0.08
CHRM3-202ENST00000448020 SYNJ1O43426 1573 aa14.46□□□□□ -0.09
CHRM3-202ENST00000448020 SOGA1O94964 1423 aa14.45□□□□□ -0.1
CHRM3-202ENST00000448020 CHMP7Q8WUX9 453 aaPredicted RBP14.43□□□□□ -0.1
CHRM3-202ENST00000448020 FGD5Q6ZNL6 1462 aa14.42□□□□□ -0.1
CHRM3-202ENST00000448020 GAPVD1Q14C86 1478 aa14.4□□□□□ -0.1
CHRM3-202ENST00000448020 MAGI1Q96QZ7 1491 aaPredicted RBP14.39□□□□□ -0.11
CHRM3-202ENST00000448020 ERCC6L2Q5T890 1561 aa14.37□□□□□ -0.11
CHRM3-202ENST00000448020 SYNJ2O15056 1496 aa14.37□□□□□ -0.11
CHRM3-202ENST00000448020 WDR97A6NE52 1622 aa14.36□□□□□ -0.11
CHRM3-202ENST00000448020 GRIN2BQ13224 1484 aa14.36□□□□□ -0.11
CHRM3-202ENST00000448020 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
CHRM3-202ENST00000448020 CUX1P39880 1505 aa14.36□□□□□ -0.11
CHRM3-202ENST00000448020 KIF13AQ9H1H9 1805 aa14.28□□□□□ -0.12
CHRM3-202ENST00000448020 ABCA5Q8WWZ7 1642 aa14.24□□□□□ -0.13
CHRM3-202ENST00000448020 CEP170Q5SW79 1584 aa14.24□□□□□ -0.13
CHRM3-202ENST00000448020 GRIN2AQ12879 1464 aa14.2□□□□□ -0.14
CHRM3-202ENST00000448020 ABCA10Q8WWZ4 1543 aa14.18□□□□□ -0.14
CHRM3-202ENST00000448020 ADAMTS12P58397 1594 aa14.17□□□□□ -0.14
CHRM3-202ENST00000448020 SHROOM2Q13796 1616 aa14.17□□□□□ -0.14
CHRM3-202ENST00000448020 NUP160Q12769 1436 aa14.15□□□□□ -0.14
CHRM3-202ENST00000448020 ILDR1Q86SU0 546 aaPredicted RBP14.12□□□□□ -0.15
CHRM3-202ENST00000448020 KDM4FA0A1W2PPD8 638 aa14.1□□□□□ -0.15
CHRM3-202ENST00000448020 FAM69CQ0P6D2 419 aa14.08□□□□□ -0.16
CHRM3-202ENST00000448020 PRG4Q92954 1404 aaPredicted RBP14.07□□□□□ -0.16
CHRM3-202ENST00000448020 DIP2BQ9P265 1576 aa14.06□□□□□ -0.16
CHRM3-202ENST00000448020 TSPOAP1O95153 1857 aa14.06□□□□□ -0.16
CHRM3-202ENST00000448020 ABCC10Q5T3U5 1492 aa14.06□□□□□ -0.16
CHRM3-202ENST00000448020 FHAD1B1AJZ9 1412 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms