RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 NISCHQ9Y2I1 1504 aa25.75■■□□□ 1.71
VSTM1-206ENST00000447872 ABCC9O60706 1549 aa23.15■■□□□ 1.3
VSTM1-206ENST00000447872 CCDC180Q9P1Z9 1646 aa22.99■■□□□ 1.27
VSTM1-206ENST00000447872 DNAJC5BQ9UF47 199 aa22.67■■□□□ 1.22
VSTM1-206ENST00000447872 RB1CC1Q8TDY2 1594 aa21.98■■□□□ 1.11
VSTM1-206ENST00000447872 DCAF8L2P0C7V8 631 aa21.91■■□□□ 1.1
VSTM1-206ENST00000447872 NACADO15069 1562 aa21.84■■□□□ 1.09
VSTM1-206ENST00000447872 DNAJC5Q9H3Z4 198 aa21.74■■□□□ 1.07
VSTM1-206ENST00000447872 PABPN1Q86U42 306 aaKnown RBP eCLIP21.63■■□□□ 1.05
VSTM1-206ENST00000447872 MYO15BQ96JP2 1530 aa21.54■■□□□ 1.04
VSTM1-206ENST00000447872 ZCCHC6Q5VYS8 1495 aaKnown RBP21.31■■□□□ 1
VSTM1-206ENST00000447872 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
VSTM1-206ENST00000447872 UNC13AQ9UPW8 1703 aa21.28■■□□□ 1
VSTM1-206ENST00000447872 DCAF1Q9Y4B6 1507 aa21.25■□□□□ 0.99
VSTM1-206ENST00000447872 SHROOM4Q9ULL8 1493 aa21.07■□□□□ 0.96
VSTM1-206ENST00000447872 SCRIBQ14160 1630 aa21■□□□□ 0.95
VSTM1-206ENST00000447872 CECR2Q9BXF3 1484 aa20.87■□□□□ 0.93
VSTM1-206ENST00000447872 CC2D2AQ9P2K1 1620 aa20.84■□□□□ 0.93
VSTM1-206ENST00000447872 EIF4G1Q04637 1599 aaKnown RBP20.8■□□□□ 0.92
VSTM1-206ENST00000447872 CUX2O14529 1486 aa20.37■□□□□ 0.85
VSTM1-206ENST00000447872 TRIM41Q8WV44 630 aa20.25■□□□□ 0.83
VSTM1-206ENST00000447872 NCAPD3P42695 1498 aa20.22■□□□□ 0.83
VSTM1-206ENST00000447872 ATAD2BQ9ULI0 1458 aa20.13■□□□□ 0.81
VSTM1-206ENST00000447872 SMARCA2P51531 1590 aa20.06■□□□□ 0.8
VSTM1-206ENST00000447872 SMARCA4P51532 1647 aa20.03■□□□□ 0.8
VSTM1-206ENST00000447872 ERCC6Q03468 1493 aa20.02■□□□□ 0.8
VSTM1-206ENST00000447872 HMGXB3Q12766 1538 aa19.99■□□□□ 0.79
VSTM1-206ENST00000447872 BAZ1AQ9NRL2 1556 aaPredicted RBP19.97■□□□□ 0.79
VSTM1-206ENST00000447872 BAZ1BQ9UIG0 1483 aaKnown RBP19.93■□□□□ 0.78
VSTM1-206ENST00000447872 NESP48681 1621 aa19.86■□□□□ 0.77
VSTM1-206ENST00000447872 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
VSTM1-206ENST00000447872 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.77
VSTM1-206ENST00000447872 LAMC3Q9Y6N6 1575 aa19.69■□□□□ 0.74
VSTM1-206ENST00000447872 PDS5BQ9NTI5 1447 aa19.68■□□□□ 0.74
VSTM1-206ENST00000447872 CADPSQ9ULU8 1353 aa19.63■□□□□ 0.73
VSTM1-206ENST00000447872 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
VSTM1-206ENST00000447872 WIZO95785 1651 aa19.52■□□□□ 0.72
VSTM1-206ENST00000447872 KIF21AQ7Z4S6 1674 aa19.47■□□□□ 0.71
VSTM1-206ENST00000447872 RSF1Q96T23 1441 aaPredicted RBP19.47■□□□□ 0.71
VSTM1-206ENST00000447872 MRC2Q9UBG0 1479 aa19.46■□□□□ 0.71
VSTM1-206ENST00000447872 AEBP2Q6ZN18 517 aaPredicted RBP19.4■□□□□ 0.7
VSTM1-206ENST00000447872 CEP164Q9UPV0 1460 aa19.38■□□□□ 0.69
VSTM1-206ENST00000447872 WDR62O43379 1518 aa19.36■□□□□ 0.69
VSTM1-206ENST00000447872 CFTRP13569 1480 aa19.36■□□□□ 0.69
VSTM1-206ENST00000447872 FANCD2Q9BXW9 1451 aa19.36■□□□□ 0.69
VSTM1-206ENST00000447872 TOP2AP11388 1531 aaKnown RBP19.32■□□□□ 0.68
VSTM1-206ENST00000447872 OSCARQ8IYS5 282 aa19.24■□□□□ 0.67
VSTM1-206ENST00000447872 URB2Q14146 1524 aaKnown RBP19.17■□□□□ 0.66
VSTM1-206ENST00000447872 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
VSTM1-206ENST00000447872 RIMBP3CA6NJZ7 1639 aa19.06■□□□□ 0.64
VSTM1-206ENST00000447872 RIMBP3BA6NNM3 1639 aa19.06■□□□□ 0.64
VSTM1-206ENST00000447872 RIMBP3Q9UFD9 1639 aa19.06■□□□□ 0.64
VSTM1-206ENST00000447872 TRHP20396 242 aaPredicted RBP19.04■□□□□ 0.64
VSTM1-206ENST00000447872 IFT140Q96RY7 1462 aa19.01■□□□□ 0.63
VSTM1-206ENST00000447872 ABCC8Q09428 1581 aa18.98■□□□□ 0.63
VSTM1-206ENST00000447872 TOPBP1Q92547 1522 aa18.97■□□□□ 0.63
VSTM1-206ENST00000447872 ZNF608Q9ULD9 1512 aaPredicted RBP18.95■□□□□ 0.62
VSTM1-206ENST00000447872 PRDM2Q13029 1718 aa18.92■□□□□ 0.62
VSTM1-206ENST00000447872 ARHGEF11O15085 1522 aa18.9■□□□□ 0.62
VSTM1-206ENST00000447872 DNMBPQ6XZF7 1577 aa18.87■□□□□ 0.61
VSTM1-206ENST00000447872 CYB5RLQ6IPT4 315 aa18.86■□□□□ 0.61
VSTM1-206ENST00000447872 AQRO60306 1485 aaKnown RBP eCLIP18.82■□□□□ 0.6
VSTM1-206ENST00000447872 FBLN2P98095 1184 aa18.79■□□□□ 0.6
VSTM1-206ENST00000447872 POLA1P09884 1462 aaPredicted RBP18.78■□□□□ 0.6
VSTM1-206ENST00000447872 ILDR1Q86SU0 546 aaPredicted RBP18.78■□□□□ 0.6
VSTM1-206ENST00000447872 EIF4G3O43432 1585 aaKnown RBP18.76■□□□□ 0.59
VSTM1-206ENST00000447872 SOGA1O94964 1423 aa18.76■□□□□ 0.59
VSTM1-206ENST00000447872 TARBP1Q13395 1621 aaKnown RBP18.74■□□□□ 0.59
VSTM1-206ENST00000447872 RAD54L2Q9Y4B4 1467 aa18.73■□□□□ 0.59
VSTM1-206ENST00000447872 TDRD9Q8NDG6 1382 aaKnown RBP18.73■□□□□ 0.59
VSTM1-206ENST00000447872 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
VSTM1-206ENST00000447872 FGD5Q6ZNL6 1462 aa18.66■□□□□ 0.58
VSTM1-206ENST00000447872 CHMP7Q8WUX9 453 aaPredicted RBP18.64■□□□□ 0.57
VSTM1-206ENST00000447872 ARAP1Q96P48 1450 aa18.63■□□□□ 0.57
VSTM1-206ENST00000447872 CUX1P39880 1505 aa18.63■□□□□ 0.57
VSTM1-206ENST00000447872 SNAPC4Q5SXM2 1469 aa18.59■□□□□ 0.57
VSTM1-206ENST00000447872 GRIN2BQ13224 1484 aa18.58■□□□□ 0.56
VSTM1-206ENST00000447872 CHD1O14646 1710 aa18.57■□□□□ 0.56
VSTM1-206ENST00000447872 WDR97A6NE52 1622 aa18.56■□□□□ 0.56
VSTM1-206ENST00000447872 MAGI1Q96QZ7 1491 aaPredicted RBP18.55■□□□□ 0.56
VSTM1-206ENST00000447872 SYNJ2O15056 1496 aa18.5■□□□□ 0.55
VSTM1-206ENST00000447872 GAPVD1Q14C86 1478 aa18.5■□□□□ 0.55
VSTM1-206ENST00000447872 SYNJ1O43426 1573 aa18.46■□□□□ 0.55
VSTM1-206ENST00000447872 ABCA10Q8WWZ4 1543 aa18.45■□□□□ 0.54
VSTM1-206ENST00000447872 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.54
VSTM1-206ENST00000447872 CLASP1Q7Z460 1538 aa18.44■□□□□ 0.54
VSTM1-206ENST00000447872 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
VSTM1-206ENST00000447872 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
VSTM1-206ENST00000447872 GRIN2AQ12879 1464 aa18.31■□□□□ 0.52
VSTM1-206ENST00000447872 TOP2BQ02880 1626 aa18.3■□□□□ 0.52
VSTM1-206ENST00000447872 FHAD1B1AJZ9 1412 aa18.28■□□□□ 0.52
VSTM1-206ENST00000447872 NUP160Q12769 1436 aa18.25■□□□□ 0.51
VSTM1-206ENST00000447872 BIVM-ERCC5R4GMW8 1640 aa18.25■□□□□ 0.51
VSTM1-206ENST00000447872 ADAMTS12P58397 1594 aa18.22■□□□□ 0.51
VSTM1-206ENST00000447872 ERICH3Q5RHP9 1530 aa18.21■□□□□ 0.51
VSTM1-206ENST00000447872 CEP170Q5SW79 1584 aa18.18■□□□□ 0.5
VSTM1-206ENST00000447872 JPH4Q96JJ6 628 aa18.16■□□□□ 0.5
VSTM1-206ENST00000447872 ERCC6L2Q5T890 1561 aa18.16■□□□□ 0.5
VSTM1-206ENST00000447872 PRG4Q92954 1404 aaPredicted RBP18.12■□□□□ 0.49
VSTM1-206ENST00000447872 KDM4FA0A1W2PPD8 638 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 183.1 ms