RNA–Protein interactions for RNA: ENST00000447839.6

ERCC6-203, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2 BASIC

Gene ERCC6, Length 3,411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-203ENST00000447839 NISCHQ9Y2I1 1504 aa25.69■■□□□ 1.7
ERCC6-203ENST00000447839 CCDC180Q9P1Z9 1646 aa22.15■■□□□ 1.14
ERCC6-203ENST00000447839 ZCCHC6Q5VYS8 1495 aaKnown RBP21.59■■□□□ 1.05
ERCC6-203ENST00000447839 DCAF8L2P0C7V8 631 aa21.57■■□□□ 1.04
ERCC6-203ENST00000447839 SHROOM4Q9ULL8 1493 aa21.44■■□□□ 1.02
ERCC6-203ENST00000447839 DCAF1Q9Y4B6 1507 aa21.1■□□□□ 0.97
ERCC6-203ENST00000447839 ABCC9O60706 1549 aa21.05■□□□□ 0.96
ERCC6-203ENST00000447839 SUPT5HO00267 1087 aaKnown RBP20.78■□□□□ 0.92
ERCC6-203ENST00000447839 MYO15BQ96JP2 1530 aa20.74■□□□□ 0.91
ERCC6-203ENST00000447839 NACADO15069 1562 aa20.65■□□□□ 0.9
ERCC6-203ENST00000447839 SCRIBQ14160 1630 aa20.63■□□□□ 0.89
ERCC6-203ENST00000447839 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
ERCC6-203ENST00000447839 RSF1Q96T23 1441 aaPredicted RBP20.08■□□□□ 0.8
ERCC6-203ENST00000447839 CECR2Q9BXF3 1484 aa20.04■□□□□ 0.8
ERCC6-203ENST00000447839 UNC13AQ9UPW8 1703 aa20.01■□□□□ 0.79
ERCC6-203ENST00000447839 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
ERCC6-203ENST00000447839 MROH2BQ7Z745 1585 aa19.91■□□□□ 0.78
ERCC6-203ENST00000447839 CHIC1Q5VXU3 224 aa19.86■□□□□ 0.77
ERCC6-203ENST00000447839 BICRAQ9NZM4 1560 aa19.82■□□□□ 0.76
ERCC6-203ENST00000447839 BAZ1AQ9NRL2 1556 aaPredicted RBP19.81■□□□□ 0.76
ERCC6-203ENST00000447839 WIZO95785 1651 aa19.76■□□□□ 0.75
ERCC6-203ENST00000447839 SMARCA4P51532 1647 aa19.68■□□□□ 0.74
ERCC6-203ENST00000447839 TOP2AP11388 1531 aaKnown RBP19.49■□□□□ 0.71
ERCC6-203ENST00000447839 TRIM41Q8WV44 630 aa19.44■□□□□ 0.7
ERCC6-203ENST00000447839 CCDC88BA6NC98 1476 aa19.38■□□□□ 0.69
ERCC6-203ENST00000447839 ATAD2BQ9ULI0 1458 aa19.35■□□□□ 0.69
ERCC6-203ENST00000447839 SMARCA2P51531 1590 aa19.33■□□□□ 0.69
ERCC6-203ENST00000447839 PEG3Q9GZU2 1588 aa19.33■□□□□ 0.69
ERCC6-203ENST00000447839 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
ERCC6-203ENST00000447839 EIF4G1Q04637 1599 aaKnown RBP19.25■□□□□ 0.67
ERCC6-203ENST00000447839 LOC105371045A0A1W2PR82 267 aa19.23■□□□□ 0.67
ERCC6-203ENST00000447839 FAM9AQ8IZU1 332 aaPredicted RBP19.22■□□□□ 0.67
ERCC6-203ENST00000447839 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
ERCC6-203ENST00000447839 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
ERCC6-203ENST00000447839 EHMT2Q96KQ7 1210 aa19.06■□□□□ 0.64
ERCC6-203ENST00000447839 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
ERCC6-203ENST00000447839 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
ERCC6-203ENST00000447839 WRNQ14191 1432 aaPredicted RBP eCLIP18.92■□□□□ 0.62
ERCC6-203ENST00000447839 SOGA1O94964 1423 aa18.81■□□□□ 0.6
ERCC6-203ENST00000447839 SYNJ1O43426 1573 aa18.78■□□□□ 0.6
ERCC6-203ENST00000447839 CFTRP13569 1480 aa18.76■□□□□ 0.59
ERCC6-203ENST00000447839 RUSC2Q8N2Y8 1516 aa18.72■□□□□ 0.59
ERCC6-203ENST00000447839 CSRNP3Q8WYN3 585 aa18.72■□□□□ 0.59
ERCC6-203ENST00000447839 CADPSQ9ULU8 1353 aa18.7■□□□□ 0.58
ERCC6-203ENST00000447839 EEA1Q15075 1411 aa18.69■□□□□ 0.58
ERCC6-203ENST00000447839 TOP2BQ02880 1626 aa18.63■□□□□ 0.57
ERCC6-203ENST00000447839 UBTFP17480 764 aaKnown RBP18.62■□□□□ 0.57
ERCC6-203ENST00000447839 PCGF6Q9BYE7 350 aa18.62■□□□□ 0.57
ERCC6-203ENST00000447839 CUX1P39880 1505 aa18.58■□□□□ 0.57
ERCC6-203ENST00000447839 DNAJC5BQ9UF47 199 aa18.57■□□□□ 0.56
ERCC6-203ENST00000447839 BIVM-ERCC5R4GMW8 1640 aa18.56■□□□□ 0.56
ERCC6-203ENST00000447839 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
ERCC6-203ENST00000447839 NESP48681 1621 aa18.53■□□□□ 0.56
ERCC6-203ENST00000447839 FANCD2Q9BXW9 1451 aa18.51■□□□□ 0.55
ERCC6-203ENST00000447839 GOLGA3Q08378 1498 aa18.51■□□□□ 0.55
ERCC6-203ENST00000447839 TNIKQ9UKE5 1360 aa18.49■□□□□ 0.55
ERCC6-203ENST00000447839 CEP164Q9UPV0 1460 aa18.47■□□□□ 0.55
ERCC6-203ENST00000447839 CEP162Q5TB80 1403 aa18.46■□□□□ 0.55
ERCC6-203ENST00000447839 TRIM26Q12899 539 aaPredicted RBP18.44■□□□□ 0.54
ERCC6-203ENST00000447839 PPARGC1BQ86YN6 1023 aaKnown RBP18.42■□□□□ 0.54
ERCC6-203ENST00000447839 KIF27Q86VH2 1401 aa18.42■□□□□ 0.54
ERCC6-203ENST00000447839 KIF21BO75037 1637 aa18.4■□□□□ 0.54
ERCC6-203ENST00000447839 RANGAP1P46060 587 aaPredicted RBP18.4■□□□□ 0.54
ERCC6-203ENST00000447839 LAMC3Q9Y6N6 1575 aa18.39■□□□□ 0.53
ERCC6-203ENST00000447839 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.53
ERCC6-203ENST00000447839 FGD5Q6ZNL6 1462 aa18.38■□□□□ 0.53
ERCC6-203ENST00000447839 CUX2O14529 1486 aa18.35■□□□□ 0.53
ERCC6-203ENST00000447839 PDS5BQ9NTI5 1447 aa18.34■□□□□ 0.53
ERCC6-203ENST00000447839 DNMBPQ6XZF7 1577 aa18.3■□□□□ 0.52
ERCC6-203ENST00000447839 TOPBP1Q92547 1522 aa18.3■□□□□ 0.52
ERCC6-203ENST00000447839 PRXQ9BXM0 1461 aa18.28■□□□□ 0.52
ERCC6-203ENST00000447839 TTBK1Q5TCY1 1321 aaPredicted RBP18.28■□□□□ 0.52
ERCC6-203ENST00000447839 CLIP1P30622 1438 aa18.27■□□□□ 0.52
ERCC6-203ENST00000447839 RAD54L2Q9Y4B4 1467 aa18.26■□□□□ 0.51
ERCC6-203ENST00000447839 POLA1P09884 1462 aaPredicted RBP18.25■□□□□ 0.51
ERCC6-203ENST00000447839 IGF1RP08069 1367 aa18.24■□□□□ 0.51
ERCC6-203ENST00000447839 URB2Q14146 1524 aaKnown RBP18.23■□□□□ 0.51
ERCC6-203ENST00000447839 ERICH3Q5RHP9 1530 aa18.23■□□□□ 0.51
ERCC6-203ENST00000447839 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
ERCC6-203ENST00000447839 CARMIL1Q5VZK9 1371 aa18.18■□□□□ 0.5
ERCC6-203ENST00000447839 HRCP23327 699 aa18.16■□□□□ 0.5
ERCC6-203ENST00000447839 ABCA10Q8WWZ4 1543 aa18.15■□□□□ 0.5
ERCC6-203ENST00000447839 APLP2Q06481 763 aa18.12■□□□□ 0.49
ERCC6-203ENST00000447839 TDRD9Q8NDG6 1382 aaKnown RBP18.12■□□□□ 0.49
ERCC6-203ENST00000447839 VPS8Q8N3P4 1428 aa18.1■□□□□ 0.49
ERCC6-203ENST00000447839 MRC2Q9UBG0 1479 aa18.06■□□□□ 0.48
ERCC6-203ENST00000447839 ERCC6Q03468 1493 aa18.03■□□□□ 0.48
ERCC6-203ENST00000447839 GAPVD1Q14C86 1478 aa18.02■□□□□ 0.47
ERCC6-203ENST00000447839 ARAP1Q96P48 1450 aa17.99■□□□□ 0.47
ERCC6-203ENST00000447839 WDR97A6NE52 1622 aa17.98■□□□□ 0.47
ERCC6-203ENST00000447839 ARHGAP35Q9NRY4 1499 aa17.97■□□□□ 0.47
ERCC6-203ENST00000447839 CUL7Q14999 1698 aa17.95■□□□□ 0.46
ERCC6-203ENST00000447839 P3H3Q8IVL6 736 aa17.95■□□□□ 0.46
ERCC6-203ENST00000447839 ABCA5Q8WWZ7 1642 aa17.95■□□□□ 0.46
ERCC6-203ENST00000447839 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
ERCC6-203ENST00000447839 AQRO60306 1485 aaKnown RBP eCLIP17.93■□□□□ 0.46
ERCC6-203ENST00000447839 WDR62O43379 1518 aa17.89■□□□□ 0.45
ERCC6-203ENST00000447839 IFT140Q96RY7 1462 aa17.87■□□□□ 0.45
ERCC6-203ENST00000447839 ATP1B4Q9UN42 357 aaPredicted RBP17.86■□□□□ 0.45
ERCC6-203ENST00000447839 ZNF608Q9ULD9 1512 aaPredicted RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms