RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 NISCHQ9Y2I1 1504 aa31.93■■■□□ 2.7
HLA-DOB-207ENST00000447394 CCDC180Q9P1Z9 1646 aa28.32■■■□□ 2.12
HLA-DOB-207ENST00000447394 ABCC9O60706 1549 aa27.45■■□□□ 1.98
HLA-DOB-207ENST00000447394 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
HLA-DOB-207ENST00000447394 DCAF8L2P0C7V8 631 aa26.52■■□□□ 1.84
HLA-DOB-207ENST00000447394 NACADO15069 1562 aa26.46■■□□□ 1.83
HLA-DOB-207ENST00000447394 RB1CC1Q8TDY2 1594 aa26.46■■□□□ 1.83
HLA-DOB-207ENST00000447394 DCAF1Q9Y4B6 1507 aa26.36■■□□□ 1.81
HLA-DOB-207ENST00000447394 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
HLA-DOB-207ENST00000447394 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.77
HLA-DOB-207ENST00000447394 SCRIBQ14160 1630 aa25.94■■□□□ 1.74
HLA-DOB-207ENST00000447394 BICRAQ9NZM4 1560 aa25.74■■□□□ 1.71
HLA-DOB-207ENST00000447394 PABPN1Q86U42 306 aaKnown RBP eCLIP25.66■■□□□ 1.7
HLA-DOB-207ENST00000447394 SHROOM4Q9ULL8 1493 aa25.48■■□□□ 1.67
HLA-DOB-207ENST00000447394 EIF4G1Q04637 1599 aaKnown RBP25■■□□□ 1.59
HLA-DOB-207ENST00000447394 DNAJC5BQ9UF47 199 aa24.91■■□□□ 1.58
HLA-DOB-207ENST00000447394 CECR2Q9BXF3 1484 aa24.9■■□□□ 1.58
HLA-DOB-207ENST00000447394 CC2D2AQ9P2K1 1620 aa24.86■■□□□ 1.57
HLA-DOB-207ENST00000447394 SMARCA4P51532 1647 aa24.78■■□□□ 1.56
HLA-DOB-207ENST00000447394 BAZ1AQ9NRL2 1556 aaPredicted RBP24.71■■□□□ 1.55
HLA-DOB-207ENST00000447394 MROH2BQ7Z745 1585 aa24.67■■□□□ 1.54
HLA-DOB-207ENST00000447394 ATAD2BQ9ULI0 1458 aa24.5■■□□□ 1.51
HLA-DOB-207ENST00000447394 WIZO95785 1651 aa24.49■■□□□ 1.51
HLA-DOB-207ENST00000447394 SMARCA2P51531 1590 aa24.46■■□□□ 1.51
HLA-DOB-207ENST00000447394 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
HLA-DOB-207ENST00000447394 RSF1Q96T23 1441 aaPredicted RBP24.42■■□□□ 1.5
HLA-DOB-207ENST00000447394 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
HLA-DOB-207ENST00000447394 HMGXB3Q12766 1538 aa24.35■■□□□ 1.49
HLA-DOB-207ENST00000447394 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
HLA-DOB-207ENST00000447394 TOP2AP11388 1531 aaKnown RBP24.15■■□□□ 1.46
HLA-DOB-207ENST00000447394 SUPT5HO00267 1087 aaKnown RBP24.02■■□□□ 1.44
HLA-DOB-207ENST00000447394 NESP48681 1621 aa23.88■■□□□ 1.41
HLA-DOB-207ENST00000447394 CCDC88BA6NC98 1476 aa23.85■■□□□ 1.41
HLA-DOB-207ENST00000447394 LAMC3Q9Y6N6 1575 aa23.76■■□□□ 1.39
HLA-DOB-207ENST00000447394 CADPSQ9ULU8 1353 aa23.68■■□□□ 1.38
HLA-DOB-207ENST00000447394 KIF21AQ7Z4S6 1674 aa23.67■■□□□ 1.38
HLA-DOB-207ENST00000447394 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
HLA-DOB-207ENST00000447394 CFTRP13569 1480 aa23.63■■□□□ 1.37
HLA-DOB-207ENST00000447394 ERCC6Q03468 1493 aa23.58■■□□□ 1.37
HLA-DOB-207ENST00000447394 PDS5BQ9NTI5 1447 aa23.5■■□□□ 1.35
HLA-DOB-207ENST00000447394 FANCD2Q9BXW9 1451 aa23.49■■□□□ 1.35
HLA-DOB-207ENST00000447394 THOC2Q8NI27 1593 aaKnown RBP23.47■■□□□ 1.35
HLA-DOB-207ENST00000447394 CEP164Q9UPV0 1460 aa23.43■■□□□ 1.34
HLA-DOB-207ENST00000447394 MRC2Q9UBG0 1479 aa23.34■■□□□ 1.33
HLA-DOB-207ENST00000447394 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
HLA-DOB-207ENST00000447394 WDR62O43379 1518 aa23.28■■□□□ 1.32
HLA-DOB-207ENST00000447394 CUX2O14529 1486 aa23.18■■□□□ 1.3
HLA-DOB-207ENST00000447394 ABCC8Q09428 1581 aa23.17■■□□□ 1.3
HLA-DOB-207ENST00000447394 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
HLA-DOB-207ENST00000447394 TOPBP1Q92547 1522 aa23.17■■□□□ 1.3
HLA-DOB-207ENST00000447394 CUX1P39880 1505 aa23.13■■□□□ 1.29
HLA-DOB-207ENST00000447394 SYNJ1O43426 1573 aa23.06■■□□□ 1.28
HLA-DOB-207ENST00000447394 BIVM-ERCC5R4GMW8 1640 aa23.02■■□□□ 1.28
HLA-DOB-207ENST00000447394 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
HLA-DOB-207ENST00000447394 POLA1P09884 1462 aaPredicted RBP22.98■■□□□ 1.27
HLA-DOB-207ENST00000447394 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
HLA-DOB-207ENST00000447394 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
HLA-DOB-207ENST00000447394 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
HLA-DOB-207ENST00000447394 RAD54L2Q9Y4B4 1467 aa22.92■■□□□ 1.26
HLA-DOB-207ENST00000447394 IFT140Q96RY7 1462 aa22.89■■□□□ 1.25
HLA-DOB-207ENST00000447394 WDR97A6NE52 1622 aa22.88■■□□□ 1.25
HLA-DOB-207ENST00000447394 ZNF608Q9ULD9 1512 aaPredicted RBP22.86■■□□□ 1.25
HLA-DOB-207ENST00000447394 SOGA1O94964 1423 aa22.83■■□□□ 1.25
HLA-DOB-207ENST00000447394 EIF4G3O43432 1585 aaKnown RBP22.82■■□□□ 1.24
HLA-DOB-207ENST00000447394 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.23
HLA-DOB-207ENST00000447394 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
HLA-DOB-207ENST00000447394 TDRD9Q8NDG6 1382 aaKnown RBP22.71■■□□□ 1.23
HLA-DOB-207ENST00000447394 ABCA5Q8WWZ7 1642 aa22.7■■□□□ 1.22
HLA-DOB-207ENST00000447394 PBRM1Q86U86 1689 aa22.69■■□□□ 1.22
HLA-DOB-207ENST00000447394 GAPVD1Q14C86 1478 aa22.6■■□□□ 1.21
HLA-DOB-207ENST00000447394 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
HLA-DOB-207ENST00000447394 CHIC1Q5VXU3 224 aa22.55■■□□□ 1.2
HLA-DOB-207ENST00000447394 GRIN2BQ13224 1484 aa22.54■■□□□ 1.2
HLA-DOB-207ENST00000447394 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
HLA-DOB-207ENST00000447394 CHD1O14646 1710 aa22.54■■□□□ 1.2
HLA-DOB-207ENST00000447394 RUSC2Q8N2Y8 1516 aa22.49■■□□□ 1.19
HLA-DOB-207ENST00000447394 ADAMTS12P58397 1594 aa22.46■■□□□ 1.19
HLA-DOB-207ENST00000447394 KIF27Q86VH2 1401 aa22.46■■□□□ 1.19
HLA-DOB-207ENST00000447394 MAGI1Q96QZ7 1491 aaPredicted RBP22.45■■□□□ 1.18
HLA-DOB-207ENST00000447394 ERICH3Q5RHP9 1530 aa22.45■■□□□ 1.18
HLA-DOB-207ENST00000447394 SYNJ2O15056 1496 aa22.37■■□□□ 1.17
HLA-DOB-207ENST00000447394 CUL7Q14999 1698 aa22.36■■□□□ 1.17
HLA-DOB-207ENST00000447394 FBLN2P98095 1184 aa22.35■■□□□ 1.17
HLA-DOB-207ENST00000447394 IGF1RP08069 1367 aa22.34■■□□□ 1.17
HLA-DOB-207ENST00000447394 FHAD1B1AJZ9 1412 aa22.31■■□□□ 1.16
HLA-DOB-207ENST00000447394 GRIN2AQ12879 1464 aa22.28■■□□□ 1.16
HLA-DOB-207ENST00000447394 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
HLA-DOB-207ENST00000447394 CEP170Q5SW79 1584 aa22.25■■□□□ 1.15
HLA-DOB-207ENST00000447394 FAM9AQ8IZU1 332 aaPredicted RBP22.24■■□□□ 1.15
HLA-DOB-207ENST00000447394 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
HLA-DOB-207ENST00000447394 OSCARQ8IYS5 282 aa22.2■■□□□ 1.14
HLA-DOB-207ENST00000447394 CLASP1Q7Z460 1538 aa22.2■■□□□ 1.14
HLA-DOB-207ENST00000447394 EEA1Q15075 1411 aa22.17■■□□□ 1.14
HLA-DOB-207ENST00000447394 NUP160Q12769 1436 aa22.14■■□□□ 1.14
HLA-DOB-207ENST00000447394 PRXQ9BXM0 1461 aa22.14■■□□□ 1.13
HLA-DOB-207ENST00000447394 RAPGEF2Q9Y4G8 1499 aa22.14■■□□□ 1.13
HLA-DOB-207ENST00000447394 CSRNP3Q8WYN3 585 aa22.12■■□□□ 1.13
HLA-DOB-207ENST00000447394 DNAJC5Q9H3Z4 198 aa22.1■■□□□ 1.13
HLA-DOB-207ENST00000447394 CTTNBP2Q8WZ74 1663 aa22.08■■□□□ 1.13
HLA-DOB-207ENST00000447394 KIF21BO75037 1637 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms