RNA–Protein interactions for RNA: ENST00000446604.6

ABCA6-202, Transcript of ATP binding cassette subfamily A member 6, humanhuman

TSL 2

Gene ABCA6, Length 2,176 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6-202ENST00000446604 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
ABCA6-202ENST00000446604 CCDC180Q9P1Z9 1646 aa18.66■□□□□ 0.58
ABCA6-202ENST00000446604 ABCC9O60706 1549 aa17.91■□□□□ 0.46
ABCA6-202ENST00000446604 ZCCHC6Q5VYS8 1495 aaKnown RBP17.71■□□□□ 0.43
ABCA6-202ENST00000446604 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
ABCA6-202ENST00000446604 DCAF8L2P0C7V8 631 aa17.56■□□□□ 0.4
ABCA6-202ENST00000446604 MYO15BQ96JP2 1530 aa17.53■□□□□ 0.4
ABCA6-202ENST00000446604 NACADO15069 1562 aa17.49■□□□□ 0.39
ABCA6-202ENST00000446604 SHROOM4Q9ULL8 1493 aa17.47■□□□□ 0.39
ABCA6-202ENST00000446604 RB1CC1Q8TDY2 1594 aa17.41■□□□□ 0.38
ABCA6-202ENST00000446604 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
ABCA6-202ENST00000446604 SUPT5HO00267 1087 aaKnown RBP17■□□□□ 0.31
ABCA6-202ENST00000446604 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
ABCA6-202ENST00000446604 BICRAQ9NZM4 1560 aa16.84■□□□□ 0.29
ABCA6-202ENST00000446604 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
ABCA6-202ENST00000446604 CECR2Q9BXF3 1484 aa16.44■□□□□ 0.22
ABCA6-202ENST00000446604 BAZ1AQ9NRL2 1556 aaPredicted RBP16.4■□□□□ 0.22
ABCA6-202ENST00000446604 RSF1Q96T23 1441 aaPredicted RBP16.4■□□□□ 0.22
ABCA6-202ENST00000446604 CHIC1Q5VXU3 224 aa16.39■□□□□ 0.21
ABCA6-202ENST00000446604 EIF4G1Q04637 1599 aaKnown RBP16.39■□□□□ 0.21
ABCA6-202ENST00000446604 SMARCA4P51532 1647 aa16.34■□□□□ 0.21
ABCA6-202ENST00000446604 MROH2BQ7Z745 1585 aa16.31■□□□□ 0.2
ABCA6-202ENST00000446604 CC2D2AQ9P2K1 1620 aa16.22■□□□□ 0.19
ABCA6-202ENST00000446604 PEG3Q9GZU2 1588 aa16.2■□□□□ 0.18
ABCA6-202ENST00000446604 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
ABCA6-202ENST00000446604 ATAD2BQ9ULI0 1458 aa16.18■□□□□ 0.18
ABCA6-202ENST00000446604 NCAPD3P42695 1498 aa16.14■□□□□ 0.17
ABCA6-202ENST00000446604 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
ABCA6-202ENST00000446604 WIZO95785 1651 aa16.13■□□□□ 0.17
ABCA6-202ENST00000446604 HMGXB3Q12766 1538 aa16.08■□□□□ 0.16
ABCA6-202ENST00000446604 BAZ1BQ9UIG0 1483 aaKnown RBP16.07■□□□□ 0.16
ABCA6-202ENST00000446604 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
ABCA6-202ENST00000446604 TRIM41Q8WV44 630 aa15.93■□□□□ 0.14
ABCA6-202ENST00000446604 CCDC88BA6NC98 1476 aa15.83■□□□□ 0.12
ABCA6-202ENST00000446604 LOC105371045A0A1W2PR82 267 aa15.82■□□□□ 0.12
ABCA6-202ENST00000446604 CADPSQ9ULU8 1353 aa15.7■□□□□ 0.1
ABCA6-202ENST00000446604 FAM9AQ8IZU1 332 aaPredicted RBP15.69■□□□□ 0.1
ABCA6-202ENST00000446604 CFTRP13569 1480 aa15.67■□□□□ 0.1
ABCA6-202ENST00000446604 LAMC3Q9Y6N6 1575 aa15.64■□□□□ 0.09
ABCA6-202ENST00000446604 NESP48681 1621 aa15.6■□□□□ 0.09
ABCA6-202ENST00000446604 ABCC8Q09428 1581 aa15.56■□□□□ 0.08
ABCA6-202ENST00000446604 PDS5BQ9NTI5 1447 aa15.56■□□□□ 0.08
ABCA6-202ENST00000446604 PRDM2Q13029 1718 aa15.52■□□□□ 0.07
ABCA6-202ENST00000446604 PCGF6Q9BYE7 350 aa15.51■□□□□ 0.07
ABCA6-202ENST00000446604 EHMT2Q96KQ7 1210 aa15.51■□□□□ 0.07
ABCA6-202ENST00000446604 FANCD2Q9BXW9 1451 aa15.49■□□□□ 0.07
ABCA6-202ENST00000446604 WRNQ14191 1432 aaPredicted RBP eCLIP15.44■□□□□ 0.06
ABCA6-202ENST00000446604 ERCC6Q03468 1493 aa15.44■□□□□ 0.06
ABCA6-202ENST00000446604 CEP164Q9UPV0 1460 aa15.44■□□□□ 0.06
ABCA6-202ENST00000446604 KIF21AQ7Z4S6 1674 aa15.4■□□□□ 0.06
ABCA6-202ENST00000446604 EEA1Q15075 1411 aa15.39■□□□□ 0.05
ABCA6-202ENST00000446604 SOGA1O94964 1423 aa15.38■□□□□ 0.05
ABCA6-202ENST00000446604 TRIM26Q12899 539 aaPredicted RBP15.38■□□□□ 0.05
ABCA6-202ENST00000446604 MRC2Q9UBG0 1479 aa15.34■□□□□ 0.05
ABCA6-202ENST00000446604 CSRNP3Q8WYN3 585 aa15.32■□□□□ 0.04
ABCA6-202ENST00000446604 HRCP23327 699 aa15.32■□□□□ 0.04
ABCA6-202ENST00000446604 SYNJ1O43426 1573 aa15.31■□□□□ 0.04
ABCA6-202ENST00000446604 URB2Q14146 1524 aaKnown RBP15.3■□□□□ 0.04
ABCA6-202ENST00000446604 DNMBPQ6XZF7 1577 aa15.29■□□□□ 0.04
ABCA6-202ENST00000446604 CUX1P39880 1505 aa15.28■□□□□ 0.04
ABCA6-202ENST00000446604 THOC2Q8NI27 1593 aaKnown RBP15.28■□□□□ 0.04
ABCA6-202ENST00000446604 WDR62O43379 1518 aa15.27■□□□□ 0.04
ABCA6-202ENST00000446604 RUSC2Q8N2Y8 1516 aa15.27■□□□□ 0.04
ABCA6-202ENST00000446604 TOPBP1Q92547 1522 aa15.27■□□□□ 0.04
ABCA6-202ENST00000446604 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
ABCA6-202ENST00000446604 TNIKQ9UKE5 1360 aa15.24■□□□□ 0.03
ABCA6-202ENST00000446604 BIVM-ERCC5R4GMW8 1640 aa15.23■□□□□ 0.03
ABCA6-202ENST00000446604 UBTFP17480 764 aaKnown RBP15.22■□□□□ 0.03
ABCA6-202ENST00000446604 GOLGA3Q08378 1498 aa15.22■□□□□ 0.03
ABCA6-202ENST00000446604 CEP162Q5TB80 1403 aa15.2■□□□□ 0.02
ABCA6-202ENST00000446604 POLA1P09884 1462 aaPredicted RBP15.18■□□□□ 0.02
ABCA6-202ENST00000446604 FGD5Q6ZNL6 1462 aa15.18■□□□□ 0.02
ABCA6-202ENST00000446604 CUX2O14529 1486 aa15.16■□□□□ 0.02
ABCA6-202ENST00000446604 KIF21BO75037 1637 aa15.12■□□□□ 0.01
ABCA6-202ENST00000446604 IFT140Q96RY7 1462 aa15.12■□□□□ 0.01
ABCA6-202ENST00000446604 PPARGC1BQ86YN6 1023 aaKnown RBP15.09■□□□□ 0.01
ABCA6-202ENST00000446604 RAD54L2Q9Y4B4 1467 aa15.09■□□□□ 0.01
ABCA6-202ENST00000446604 TARBP1Q13395 1621 aaKnown RBP15.07■□□□□ 0
ABCA6-202ENST00000446604 ABCA10Q8WWZ4 1543 aa15.07■□□□□ 0
ABCA6-202ENST00000446604 RAPGEF2Q9Y4G8 1499 aa15.03■□□□□ -0
ABCA6-202ENST00000446604 KIF27Q86VH2 1401 aa15.03■□□□□ -0
ABCA6-202ENST00000446604 CLIP1P30622 1438 aa15.01□□□□□ -0.01
ABCA6-202ENST00000446604 WDR97A6NE52 1622 aa15□□□□□ -0.01
ABCA6-202ENST00000446604 TDRD9Q8NDG6 1382 aaKnown RBP15□□□□□ -0.01
ABCA6-202ENST00000446604 ZNF608Q9ULD9 1512 aaPredicted RBP14.98□□□□□ -0.01
ABCA6-202ENST00000446604 PRXQ9BXM0 1461 aa14.97□□□□□ -0.01
ABCA6-202ENST00000446604 ERICH3Q5RHP9 1530 aa14.97□□□□□ -0.01
ABCA6-202ENST00000446604 GAPVD1Q14C86 1478 aa14.96□□□□□ -0.01
ABCA6-202ENST00000446604 AQRO60306 1485 aaKnown RBP eCLIP14.96□□□□□ -0.01
ABCA6-202ENST00000446604 ZEB1P37275 1124 aaPredicted RBP14.95□□□□□ -0.02
ABCA6-202ENST00000446604 ABCA5Q8WWZ7 1642 aa14.94□□□□□ -0.02
ABCA6-202ENST00000446604 TTBK1Q5TCY1 1321 aaPredicted RBP14.94□□□□□ -0.02
ABCA6-202ENST00000446604 EIF4G3O43432 1585 aaKnown RBP14.93□□□□□ -0.02
ABCA6-202ENST00000446604 RANGAP1P46060 587 aaPredicted RBP14.92□□□□□ -0.02
ABCA6-202ENST00000446604 GRIN2BQ13224 1484 aa14.92□□□□□ -0.02
ABCA6-202ENST00000446604 VPS8Q8N3P4 1428 aa14.91□□□□□ -0.02
ABCA6-202ENST00000446604 IGF1RP08069 1367 aa14.9□□□□□ -0.02
ABCA6-202ENST00000446604 APLP2Q06481 763 aa14.88□□□□□ -0.03
ABCA6-202ENST00000446604 PBRM1Q86U86 1689 aa14.85□□□□□ -0.03
ABCA6-202ENST00000446604 MAGI1Q96QZ7 1491 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms