RNA–Protein interactions for RNA: ENST00000446271.5

GCA-205, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 691 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-205ENST00000446271 NISCHQ9Y2I1 1504 aa35.21■■■■□ 3.23
GCA-205ENST00000446271 CCDC180Q9P1Z9 1646 aa31.28■■■□□ 2.6
GCA-205ENST00000446271 ABCC9O60706 1549 aa30.37■■■□□ 2.45
GCA-205ENST00000446271 NACADO15069 1562 aa29.42■■■□□ 2.3
GCA-205ENST00000446271 RB1CC1Q8TDY2 1594 aa29.41■■■□□ 2.3
GCA-205ENST00000446271 DCAF8L2P0C7V8 631 aa29.36■■■□□ 2.29
GCA-205ENST00000446271 ZCCHC6Q5VYS8 1495 aaKnown RBP29.34■■■□□ 2.29
GCA-205ENST00000446271 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
GCA-205ENST00000446271 DCAF1Q9Y4B6 1507 aa29.23■■■□□ 2.27
GCA-205ENST00000446271 UNC13AQ9UPW8 1703 aa28.55■■■□□ 2.16
GCA-205ENST00000446271 SCRIBQ14160 1630 aa28.43■■■□□ 2.14
GCA-205ENST00000446271 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.14
GCA-205ENST00000446271 BICRAQ9NZM4 1560 aa28.37■■■□□ 2.13
GCA-205ENST00000446271 SHROOM4Q9ULL8 1493 aa28.33■■■□□ 2.13
GCA-205ENST00000446271 DNAJC5BQ9UF47 199 aa27.69■■■□□ 2.02
GCA-205ENST00000446271 EIF4G1Q04637 1599 aaKnown RBP27.67■■■□□ 2.02
GCA-205ENST00000446271 CC2D2AQ9P2K1 1620 aa27.5■■□□□ 1.99
GCA-205ENST00000446271 CECR2Q9BXF3 1484 aa27.35■■□□□ 1.97
GCA-205ENST00000446271 BAZ1AQ9NRL2 1556 aaPredicted RBP27.33■■□□□ 1.97
GCA-205ENST00000446271 SMARCA4P51532 1647 aa27.26■■□□□ 1.95
GCA-205ENST00000446271 SMARCA2P51531 1590 aa27.16■■□□□ 1.94
GCA-205ENST00000446271 NCAPD3P42695 1498 aa27.13■■□□□ 1.93
GCA-205ENST00000446271 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
GCA-205ENST00000446271 MROH2BQ7Z745 1585 aa27.05■■□□□ 1.92
GCA-205ENST00000446271 PEG3Q9GZU2 1588 aa27.05■■□□□ 1.92
GCA-205ENST00000446271 HMGXB3Q12766 1538 aa27■■□□□ 1.91
GCA-205ENST00000446271 BAZ1BQ9UIG0 1483 aaKnown RBP26.92■■□□□ 1.9
GCA-205ENST00000446271 RSF1Q96T23 1441 aaPredicted RBP26.84■■□□□ 1.89
GCA-205ENST00000446271 WIZO95785 1651 aa26.75■■□□□ 1.87
GCA-205ENST00000446271 TOP2AP11388 1531 aaKnown RBP26.57■■□□□ 1.84
GCA-205ENST00000446271 LAMC3Q9Y6N6 1575 aa26.39■■□□□ 1.82
GCA-205ENST00000446271 CADPSQ9ULU8 1353 aa26.34■■□□□ 1.81
GCA-205ENST00000446271 ERCC6Q03468 1493 aa26.28■■□□□ 1.8
GCA-205ENST00000446271 NESP48681 1621 aa26.28■■□□□ 1.8
GCA-205ENST00000446271 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
GCA-205ENST00000446271 SUPT5HO00267 1087 aaKnown RBP26.25■■□□□ 1.79
GCA-205ENST00000446271 CCDC88BA6NC98 1476 aa26.23■■□□□ 1.79
GCA-205ENST00000446271 CFTRP13569 1480 aa26.19■■□□□ 1.78
GCA-205ENST00000446271 CUX2O14529 1486 aa26■■□□□ 1.75
GCA-205ENST00000446271 FANCD2Q9BXW9 1451 aa26■■□□□ 1.75
GCA-205ENST00000446271 KIF21AQ7Z4S6 1674 aa25.99■■□□□ 1.75
GCA-205ENST00000446271 CEP164Q9UPV0 1460 aa25.98■■□□□ 1.75
GCA-205ENST00000446271 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
GCA-205ENST00000446271 MRC2Q9UBG0 1479 aa25.91■■□□□ 1.74
GCA-205ENST00000446271 THOC2Q8NI27 1593 aaKnown RBP25.9■■□□□ 1.74
GCA-205ENST00000446271 WDR62O43379 1518 aa25.79■■□□□ 1.72
GCA-205ENST00000446271 ABCC8Q09428 1581 aa25.74■■□□□ 1.71
GCA-205ENST00000446271 URB2Q14146 1524 aaKnown RBP25.67■■□□□ 1.7
GCA-205ENST00000446271 DNMBPQ6XZF7 1577 aa25.59■■□□□ 1.69
GCA-205ENST00000446271 TOPBP1Q92547 1522 aa25.58■■□□□ 1.69
GCA-205ENST00000446271 IFT140Q96RY7 1462 aa25.46■■□□□ 1.67
GCA-205ENST00000446271 CUX1P39880 1505 aa25.38■■□□□ 1.65
GCA-205ENST00000446271 POLA1P09884 1462 aaPredicted RBP25.36■■□□□ 1.65
GCA-205ENST00000446271 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
GCA-205ENST00000446271 SOGA1O94964 1423 aa25.31■■□□□ 1.64
GCA-205ENST00000446271 FGD5Q6ZNL6 1462 aa25.31■■□□□ 1.64
GCA-205ENST00000446271 TOP2BQ02880 1626 aa25.26■■□□□ 1.63
GCA-205ENST00000446271 TARBP1Q13395 1621 aaKnown RBP25.26■■□□□ 1.63
GCA-205ENST00000446271 BIVM-ERCC5R4GMW8 1640 aa25.24■■□□□ 1.63
GCA-205ENST00000446271 WDR97A6NE52 1622 aa25.23■■□□□ 1.63
GCA-205ENST00000446271 RAD54L2Q9Y4B4 1467 aa25.2■■□□□ 1.62
GCA-205ENST00000446271 ZNF608Q9ULD9 1512 aaPredicted RBP25.19■■□□□ 1.62
GCA-205ENST00000446271 SYNJ1O43426 1573 aa25.17■■□□□ 1.62
GCA-205ENST00000446271 EIF4G3O43432 1585 aaKnown RBP25.14■■□□□ 1.61
GCA-205ENST00000446271 ABCA10Q8WWZ4 1543 aa25.13■■□□□ 1.61
GCA-205ENST00000446271 AQRO60306 1485 aaKnown RBP eCLIP25.1■■□□□ 1.61
GCA-205ENST00000446271 TDRD9Q8NDG6 1382 aaKnown RBP25.09■■□□□ 1.61
GCA-205ENST00000446271 GRIN2BQ13224 1484 aa25.02■■□□□ 1.6
GCA-205ENST00000446271 GAPVD1Q14C86 1478 aa25.02■■□□□ 1.6
GCA-205ENST00000446271 DNAJC5Q9H3Z4 198 aa25.01■■□□□ 1.59
GCA-205ENST00000446271 OSCARQ8IYS5 282 aa24.96■■□□□ 1.59
GCA-205ENST00000446271 ABCA5Q8WWZ7 1642 aa24.96■■□□□ 1.59
GCA-205ENST00000446271 MAGI1Q96QZ7 1491 aaPredicted RBP24.96■■□□□ 1.59
GCA-205ENST00000446271 SNAPC4Q5SXM2 1469 aa24.89■■□□□ 1.58
GCA-205ENST00000446271 PBRM1Q86U86 1689 aa24.88■■□□□ 1.57
GCA-205ENST00000446271 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
GCA-205ENST00000446271 KIF27Q86VH2 1401 aa24.86■■□□□ 1.57
GCA-205ENST00000446271 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
GCA-205ENST00000446271 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
GCA-205ENST00000446271 FBLN2P98095 1184 aa24.84■■□□□ 1.57
GCA-205ENST00000446271 SYNJ2O15056 1496 aa24.83■■□□□ 1.57
GCA-205ENST00000446271 FHAD1B1AJZ9 1412 aa24.77■■□□□ 1.56
GCA-205ENST00000446271 CHD1O14646 1710 aa24.76■■□□□ 1.55
GCA-205ENST00000446271 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
GCA-205ENST00000446271 IGF1RP08069 1367 aa24.69■■□□□ 1.54
GCA-205ENST00000446271 GRIN2AQ12879 1464 aa24.66■■□□□ 1.54
GCA-205ENST00000446271 CUL7Q14999 1698 aa24.65■■□□□ 1.54
GCA-205ENST00000446271 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.53
GCA-205ENST00000446271 CARMIL1Q5VZK9 1371 aa24.57■■□□□ 1.52
GCA-205ENST00000446271 NUP160Q12769 1436 aa24.55■■□□□ 1.52
GCA-205ENST00000446271 EEA1Q15075 1411 aa24.54■■□□□ 1.52
GCA-205ENST00000446271 CLASP1Q7Z460 1538 aa24.54■■□□□ 1.52
GCA-205ENST00000446271 RUSC2Q8N2Y8 1516 aa24.46■■□□□ 1.51
GCA-205ENST00000446271 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
GCA-205ENST00000446271 RAPGEF2Q9Y4G8 1499 aa24.45■■□□□ 1.51
GCA-205ENST00000446271 ARHGEF11O15085 1522 aa24.45■■□□□ 1.5
GCA-205ENST00000446271 CSRNP3Q8WYN3 585 aa24.41■■□□□ 1.5
GCA-205ENST00000446271 RIMBP3CA6NJZ7 1639 aa24.4■■□□□ 1.5
GCA-205ENST00000446271 RIMBP3BA6NNM3 1639 aa24.4■■□□□ 1.5
GCA-205ENST00000446271 RIMBP3Q9UFD9 1639 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms