RNA–Protein interactions for RNA: ENST00000446116.5

CCDC141-204, Transcript of coiled-coil domain containing 141, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC141, Length 2,029 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141-204ENST00000446116 CHIC1Q5VXU3 224 aa16.24■□□□□ 0.19
CCDC141-204ENST00000446116 NISCHQ9Y2I1 1504 aa15.96■□□□□ 0.15
CCDC141-204ENST00000446116 AEBP2Q6ZN18 517 aaPredicted RBP15.95■□□□□ 0.14
CCDC141-204ENST00000446116 PHF23Q9BUL5 403 aaPredicted RBP14.39□□□□□ -0.11
CCDC141-204ENST00000446116 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
CCDC141-204ENST00000446116 ABCC9O60706 1549 aa13.73□□□□□ -0.21
CCDC141-204ENST00000446116 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
CCDC141-204ENST00000446116 SENP3Q9H4L4 574 aaPredicted RBP13.36□□□□□ -0.27
CCDC141-204ENST00000446116 NACADO15069 1562 aa13.32□□□□□ -0.28
CCDC141-204ENST00000446116 MYO15BQ96JP2 1530 aa13.32□□□□□ -0.28
CCDC141-204ENST00000446116 ZCCHC6Q5VYS8 1495 aaKnown RBP13.32□□□□□ -0.28
CCDC141-204ENST00000446116 RB1CC1Q8TDY2 1594 aa13.29□□□□□ -0.28
CCDC141-204ENST00000446116 DCAF1Q9Y4B6 1507 aa13.27□□□□□ -0.29
CCDC141-204ENST00000446116 UNC13AQ9UPW8 1703 aa13.12□□□□□ -0.31
CCDC141-204ENST00000446116 DCAF8L2P0C7V8 631 aa13.06□□□□□ -0.32
CCDC141-204ENST00000446116 BICRAQ9NZM4 1560 aa12.97□□□□□ -0.33
CCDC141-204ENST00000446116 SCRIBQ14160 1630 aa12.87□□□□□ -0.35
CCDC141-204ENST00000446116 SHROOM4Q9ULL8 1493 aa12.82□□□□□ -0.36
CCDC141-204ENST00000446116 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
CCDC141-204ENST00000446116 ADRA2BP18089 450 aa12.64□□□□□ -0.39
CCDC141-204ENST00000446116 DNAJC5BQ9UF47 199 aa12.61□□□□□ -0.39
CCDC141-204ENST00000446116 EIF4G1Q04637 1599 aaKnown RBP12.56□□□□□ -0.4
CCDC141-204ENST00000446116 KCNA4P22459 653 aa12.53□□□□□ -0.4
CCDC141-204ENST00000446116 EHMT2Q96KQ7 1210 aa12.5□□□□□ -0.41
CCDC141-204ENST00000446116 CC2D2AQ9P2K1 1620 aa12.49□□□□□ -0.41
CCDC141-204ENST00000446116 PPP6R1Q9UPN7 881 aa12.46□□□□□ -0.41
CCDC141-204ENST00000446116 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.42
CCDC141-204ENST00000446116 SMARCA4P51532 1647 aa12.39□□□□□ -0.43
CCDC141-204ENST00000446116 BAZ1AQ9NRL2 1556 aaPredicted RBP12.35□□□□□ -0.43
CCDC141-204ENST00000446116 FOXD1Q16676 465 aa12.35□□□□□ -0.43
CCDC141-204ENST00000446116 PEG3Q9GZU2 1588 aa12.32□□□□□ -0.44
CCDC141-204ENST00000446116 NCAPD3P42695 1498 aa12.29□□□□□ -0.44
CCDC141-204ENST00000446116 ATAD2BQ9ULI0 1458 aa12.28□□□□□ -0.44
CCDC141-204ENST00000446116 MROH2BQ7Z745 1585 aa12.28□□□□□ -0.44
CCDC141-204ENST00000446116 SMARCA2P51531 1590 aa12.26□□□□□ -0.45
CCDC141-204ENST00000446116 HMGXB3Q12766 1538 aa12.24□□□□□ -0.45
CCDC141-204ENST00000446116 WIZO95785 1651 aa12.16□□□□□ -0.46
CCDC141-204ENST00000446116 RSF1Q96T23 1441 aaPredicted RBP12.15□□□□□ -0.46
CCDC141-204ENST00000446116 BAZ1BQ9UIG0 1483 aaKnown RBP12.13□□□□□ -0.47
CCDC141-204ENST00000446116 CSRNP3Q8WYN3 585 aa12.06□□□□□ -0.48
CCDC141-204ENST00000446116 TOP2AP11388 1531 aaKnown RBP12.03□□□□□ -0.48
CCDC141-204ENST00000446116 SLC4A1APQ9BWU0 796 aaKnown RBP12.03□□□□□ -0.48
CCDC141-204ENST00000446116 PPP4R3CPQ6ZMV5 832 aa11.97□□□□□ -0.49
CCDC141-204ENST00000446116 LAMC3Q9Y6N6 1575 aa11.95□□□□□ -0.5
CCDC141-204ENST00000446116 NESP48681 1621 aa11.94□□□□□ -0.5
CCDC141-204ENST00000446116 CADPSQ9ULU8 1353 aa11.89□□□□□ -0.51
CCDC141-204ENST00000446116 CCDC88BA6NC98 1476 aa11.87□□□□□ -0.51
CCDC141-204ENST00000446116 CFTRP13569 1480 aa11.86□□□□□ -0.51
CCDC141-204ENST00000446116 PRDM2Q13029 1718 aa11.86□□□□□ -0.51
CCDC141-204ENST00000446116 KIF21AQ7Z4S6 1674 aa11.85□□□□□ -0.51
CCDC141-204ENST00000446116 NCBP3Q53F19 620 aaKnown RBP11.82□□□□□ -0.52
CCDC141-204ENST00000446116 THOC2Q8NI27 1593 aaKnown RBP11.81□□□□□ -0.52
CCDC141-204ENST00000446116 PDS5BQ9NTI5 1447 aa11.8□□□□□ -0.52
CCDC141-204ENST00000446116 PIAS4Q8N2W9 510 aaPredicted RBP11.78□□□□□ -0.52
CCDC141-204ENST00000446116 ERCC6Q03468 1493 aa11.78□□□□□ -0.52
CCDC141-204ENST00000446116 CUX2O14529 1486 aa11.75□□□□□ -0.53
CCDC141-204ENST00000446116 FANCD2Q9BXW9 1451 aa11.73□□□□□ -0.53
CCDC141-204ENST00000446116 WDR62O43379 1518 aa11.72□□□□□ -0.53
CCDC141-204ENST00000446116 NPM3O75607 178 aaKnown RBP11.72□□□□□ -0.53
CCDC141-204ENST00000446116 CEP164Q9UPV0 1460 aa11.71□□□□□ -0.54
CCDC141-204ENST00000446116 MRC2Q9UBG0 1479 aa11.7□□□□□ -0.54
CCDC141-204ENST00000446116 SUPT5HO00267 1087 aaKnown RBP11.69□□□□□ -0.54
CCDC141-204ENST00000446116 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.54
CCDC141-204ENST00000446116 DNMBPQ6XZF7 1577 aa11.59□□□□□ -0.55
CCDC141-204ENST00000446116 ZBTB22O15209 634 aa11.59□□□□□ -0.55
CCDC141-204ENST00000446116 TOPBP1Q92547 1522 aa11.58□□□□□ -0.56
CCDC141-204ENST00000446116 ABCC8Q09428 1581 aa11.58□□□□□ -0.56
CCDC141-204ENST00000446116 CUX1P39880 1505 aa11.52□□□□□ -0.56
CCDC141-204ENST00000446116 TARBP1Q13395 1621 aaKnown RBP11.51□□□□□ -0.57
CCDC141-204ENST00000446116 POLA1P09884 1462 aaPredicted RBP11.49□□□□□ -0.57
CCDC141-204ENST00000446116 IFT140Q96RY7 1462 aa11.48□□□□□ -0.57
CCDC141-204ENST00000446116 BIVM-ERCC5R4GMW8 1640 aa11.48□□□□□ -0.57
CCDC141-204ENST00000446116 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
CCDC141-204ENST00000446116 WDR97A6NE52 1622 aa11.46□□□□□ -0.58
CCDC141-204ENST00000446116 TOP2BQ02880 1626 aa11.46□□□□□ -0.58
CCDC141-204ENST00000446116 FGD5Q6ZNL6 1462 aa11.45□□□□□ -0.58
CCDC141-204ENST00000446116 SYNJ1O43426 1573 aa11.44□□□□□ -0.58
CCDC141-204ENST00000446116 ZNF608Q9ULD9 1512 aaPredicted RBP11.43□□□□□ -0.58
CCDC141-204ENST00000446116 WRNQ14191 1432 aaPredicted RBP eCLIP11.41□□□□□ -0.58
CCDC141-204ENST00000446116 EIF4G3O43432 1585 aaKnown RBP11.41□□□□□ -0.58
CCDC141-204ENST00000446116 RAD54L2Q9Y4B4 1467 aa11.4□□□□□ -0.58
CCDC141-204ENST00000446116 SOGA1O94964 1423 aa11.39□□□□□ -0.59
CCDC141-204ENST00000446116 ABCA10Q8WWZ4 1543 aa11.38□□□□□ -0.59
CCDC141-204ENST00000446116 ABCA5Q8WWZ7 1642 aa11.36□□□□□ -0.59
CCDC141-204ENST00000446116 AQRO60306 1485 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC141-204ENST00000446116 SCAF1Q9H7N4 1312 aaKnown RBP11.34□□□□□ -0.59
CCDC141-204ENST00000446116 POTEDQ86YR6 584 aa11.33□□□□□ -0.6
CCDC141-204ENST00000446116 PBRM1Q86U86 1689 aa11.32□□□□□ -0.6
CCDC141-204ENST00000446116 DNAJC5Q9H3Z4 198 aa11.31□□□□□ -0.6
CCDC141-204ENST00000446116 TDRD9Q8NDG6 1382 aaKnown RBP11.3□□□□□ -0.6
CCDC141-204ENST00000446116 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
CCDC141-204ENST00000446116 CHD1O14646 1710 aa11.29□□□□□ -0.6
CCDC141-204ENST00000446116 GRIN2BQ13224 1484 aa11.28□□□□□ -0.6
CCDC141-204ENST00000446116 GAPVD1Q14C86 1478 aa11.28□□□□□ -0.6
CCDC141-204ENST00000446116 MAGI1Q96QZ7 1491 aaPredicted RBP11.27□□□□□ -0.61
CCDC141-204ENST00000446116 ERICH3Q5RHP9 1530 aa11.24□□□□□ -0.61
CCDC141-204ENST00000446116 SNAPC4Q5SXM2 1469 aa11.24□□□□□ -0.61
CCDC141-204ENST00000446116 ADAMTS12P58397 1594 aa11.21□□□□□ -0.61
CCDC141-204ENST00000446116 SYNJ2O15056 1496 aa11.21□□□□□ -0.62
CCDC141-204ENST00000446116 SLC24A1O60721 1099 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms