RNA–Protein interactions for RNA: ENST00000445853.5

FLOT1-206, Transcript of flotillin 1, humanhuman

TSL 1 (best)

Gene FLOT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-206ENST00000445853 NISCHQ9Y2I1 1504 aa28.71■■■□□ 2.19
FLOT1-206ENST00000445853 CCDC180Q9P1Z9 1646 aa25.48■■□□□ 1.67
FLOT1-206ENST00000445853 ABCC9O60706 1549 aa24.81■■□□□ 1.56
FLOT1-206ENST00000445853 NACADO15069 1562 aa24.05■■□□□ 1.44
FLOT1-206ENST00000445853 MYO15BQ96JP2 1530 aa24.03■■□□□ 1.44
FLOT1-206ENST00000445853 RB1CC1Q8TDY2 1594 aa24.02■■□□□ 1.44
FLOT1-206ENST00000445853 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.42
FLOT1-206ENST00000445853 ZCCHC6Q5VYS8 1495 aaKnown RBP23.91■■□□□ 1.42
FLOT1-206ENST00000445853 DCAF1Q9Y4B6 1507 aa23.89■■□□□ 1.41
FLOT1-206ENST00000445853 SHROOM4Q9ULL8 1493 aa23.23■■□□□ 1.31
FLOT1-206ENST00000445853 PABPN1Q86U42 306 aaKnown RBP eCLIP23.21■■□□□ 1.31
FLOT1-206ENST00000445853 UNC13AQ9UPW8 1703 aa23.15■■□□□ 1.3
FLOT1-206ENST00000445853 BICRAQ9NZM4 1560 aa23.13■■□□□ 1.29
FLOT1-206ENST00000445853 SCRIBQ14160 1630 aa23.11■■□□□ 1.29
FLOT1-206ENST00000445853 DNAJC5BQ9UF47 199 aa22.71■■□□□ 1.23
FLOT1-206ENST00000445853 EIF4G1Q04637 1599 aaKnown RBP22.59■■□□□ 1.21
FLOT1-206ENST00000445853 CC2D2AQ9P2K1 1620 aa22.45■■□□□ 1.18
FLOT1-206ENST00000445853 CECR2Q9BXF3 1484 aa22.38■■□□□ 1.17
FLOT1-206ENST00000445853 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
FLOT1-206ENST00000445853 NCAPD3P42695 1498 aa22.22■■□□□ 1.15
FLOT1-206ENST00000445853 SMARCA4P51532 1647 aa22.19■■□□□ 1.14
FLOT1-206ENST00000445853 SMARCA2P51531 1590 aa22.18■■□□□ 1.14
FLOT1-206ENST00000445853 ATAD2BQ9ULI0 1458 aa22.15■■□□□ 1.14
FLOT1-206ENST00000445853 PEG3Q9GZU2 1588 aa22.08■■□□□ 1.13
FLOT1-206ENST00000445853 HMGXB3Q12766 1538 aa22.05■■□□□ 1.12
FLOT1-206ENST00000445853 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
FLOT1-206ENST00000445853 BAZ1BQ9UIG0 1483 aaKnown RBP21.97■■□□□ 1.11
FLOT1-206ENST00000445853 RSF1Q96T23 1441 aaPredicted RBP21.89■■□□□ 1.09
FLOT1-206ENST00000445853 WIZO95785 1651 aa21.72■■□□□ 1.07
FLOT1-206ENST00000445853 TOP2AP11388 1531 aaKnown RBP21.64■■□□□ 1.05
FLOT1-206ENST00000445853 CADPSQ9ULU8 1353 aa21.57■■□□□ 1.04
FLOT1-206ENST00000445853 LAMC3Q9Y6N6 1575 aa21.56■■□□□ 1.04
FLOT1-206ENST00000445853 PDS5BQ9NTI5 1447 aa21.52■■□□□ 1.04
FLOT1-206ENST00000445853 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
FLOT1-206ENST00000445853 CFTRP13569 1480 aa21.42■■□□□ 1.02
FLOT1-206ENST00000445853 NESP48681 1621 aa21.42■■□□□ 1.02
FLOT1-206ENST00000445853 CCDC88BA6NC98 1476 aa21.38■■□□□ 1.01
FLOT1-206ENST00000445853 CUX2O14529 1486 aa21.32■■□□□ 1
FLOT1-206ENST00000445853 SUPT5HO00267 1087 aaKnown RBP21.32■■□□□ 1
FLOT1-206ENST00000445853 FANCD2Q9BXW9 1451 aa21.24■□□□□ 0.99
FLOT1-206ENST00000445853 CEP164Q9UPV0 1460 aa21.22■□□□□ 0.99
FLOT1-206ENST00000445853 MRC2Q9UBG0 1479 aa21.18■□□□□ 0.98
FLOT1-206ENST00000445853 THOC2Q8NI27 1593 aaKnown RBP21.11■□□□□ 0.97
FLOT1-206ENST00000445853 KIF21AQ7Z4S6 1674 aa21.09■□□□□ 0.97
FLOT1-206ENST00000445853 WDR62O43379 1518 aa21.08■□□□□ 0.96
FLOT1-206ENST00000445853 ABCC8Q09428 1581 aa21.07■□□□□ 0.96
FLOT1-206ENST00000445853 PRDM2Q13029 1718 aa21.04■□□□□ 0.96
FLOT1-206ENST00000445853 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
FLOT1-206ENST00000445853 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
FLOT1-206ENST00000445853 DNMBPQ6XZF7 1577 aa20.85■□□□□ 0.93
FLOT1-206ENST00000445853 IFT140Q96RY7 1462 aa20.83■□□□□ 0.93
FLOT1-206ENST00000445853 SOGA1O94964 1423 aa20.7■□□□□ 0.9
FLOT1-206ENST00000445853 POLA1P09884 1462 aaPredicted RBP20.69■□□□□ 0.9
FLOT1-206ENST00000445853 WRNQ14191 1432 aaPredicted RBP eCLIP20.68■□□□□ 0.9
FLOT1-206ENST00000445853 CUX1P39880 1505 aa20.67■□□□□ 0.9
FLOT1-206ENST00000445853 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
FLOT1-206ENST00000445853 DNAJC5Q9H3Z4 198 aa20.62■□□□□ 0.89
FLOT1-206ENST00000445853 WDR97A6NE52 1622 aa20.62■□□□□ 0.89
FLOT1-206ENST00000445853 TARBP1Q13395 1621 aaKnown RBP20.58■□□□□ 0.89
FLOT1-206ENST00000445853 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
FLOT1-206ENST00000445853 TOP2BQ02880 1626 aa20.56■□□□□ 0.88
FLOT1-206ENST00000445853 RAD54L2Q9Y4B4 1467 aa20.54■□□□□ 0.88
FLOT1-206ENST00000445853 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
FLOT1-206ENST00000445853 BIVM-ERCC5R4GMW8 1640 aa20.5■□□□□ 0.87
FLOT1-206ENST00000445853 OSCARQ8IYS5 282 aa20.5■□□□□ 0.87
FLOT1-206ENST00000445853 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.872e-8■■■■■ 34.6
FLOT1-206ENST00000445853 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
FLOT1-206ENST00000445853 EIF4G3O43432 1585 aaKnown RBP20.46■□□□□ 0.87
FLOT1-206ENST00000445853 GRIN2BQ13224 1484 aa20.45■□□□□ 0.86
FLOT1-206ENST00000445853 SYNJ1O43426 1573 aa20.45■□□□□ 0.86
FLOT1-206ENST00000445853 GAPVD1Q14C86 1478 aa20.43■□□□□ 0.86
FLOT1-206ENST00000445853 MAGI1Q96QZ7 1491 aaPredicted RBP20.42■□□□□ 0.86
FLOT1-206ENST00000445853 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
FLOT1-206ENST00000445853 ABCA5Q8WWZ7 1642 aa20.32■□□□□ 0.84
FLOT1-206ENST00000445853 SNAPC4Q5SXM2 1469 aa20.31■□□□□ 0.84
FLOT1-206ENST00000445853 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
FLOT1-206ENST00000445853 KIF27Q86VH2 1401 aa20.3■□□□□ 0.84
FLOT1-206ENST00000445853 FBLN2P98095 1184 aa20.3■□□□□ 0.84
FLOT1-206ENST00000445853 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
FLOT1-206ENST00000445853 TRIM41Q8WV44 630 aa20.27■□□□□ 0.84
FLOT1-206ENST00000445853 FHAD1B1AJZ9 1412 aa20.25■□□□□ 0.83
FLOT1-206ENST00000445853 PBRM1Q86U86 1689 aa20.18■□□□□ 0.82
FLOT1-206ENST00000445853 IGF1RP08069 1367 aa20.18■□□□□ 0.82
FLOT1-206ENST00000445853 GRIN2AQ12879 1464 aa20.13■□□□□ 0.81
FLOT1-206ENST00000445853 ADAMTS12P58397 1594 aa20.12■□□□□ 0.81
FLOT1-206ENST00000445853 CHD1O14646 1710 aa20.1■□□□□ 0.81
FLOT1-206ENST00000445853 NUP160Q12769 1436 aa20.08■□□□□ 0.8
FLOT1-206ENST00000445853 CUL7Q14999 1698 aa20.06■□□□□ 0.8
FLOT1-206ENST00000445853 CARMIL1Q5VZK9 1371 aa20.06■□□□□ 0.8
FLOT1-206ENST00000445853 CLASP1Q7Z460 1538 aa20.04■□□□□ 0.8
FLOT1-206ENST00000445853 EEA1Q15075 1411 aa20.02■□□□□ 0.8
FLOT1-206ENST00000445853 ARHGEF11O15085 1522 aa19.99■□□□□ 0.79
FLOT1-206ENST00000445853 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
FLOT1-206ENST00000445853 RAPGEF2Q9Y4G8 1499 aa19.94■□□□□ 0.78
FLOT1-206ENST00000445853 KIAA0586Q9BVV6 1533 aa19.94■□□□□ 0.78
FLOT1-206ENST00000445853 JPH4Q96JJ6 628 aa19.94■□□□□ 0.78
FLOT1-206ENST00000445853 CEP170Q5SW79 1584 aa19.92■□□□□ 0.78
FLOT1-206ENST00000445853 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
FLOT1-206ENST00000445853 RIMBP3CA6NJZ7 1639 aa19.91■□□□□ 0.78
FLOT1-206ENST00000445853 RIMBP3BA6NNM3 1639 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms