RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 NISCHQ9Y2I1 1504 aa22.1■■□□□ 1.13
NPHP1-207ENST00000445609 CCDC180Q9P1Z9 1646 aa19.37■□□□□ 0.69
NPHP1-207ENST00000445609 ABCC9O60706 1549 aa18.58■□□□□ 0.56
NPHP1-207ENST00000445609 ZCCHC6Q5VYS8 1495 aaKnown RBP18.5■□□□□ 0.55
NPHP1-207ENST00000445609 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
NPHP1-207ENST00000445609 DCAF1Q9Y4B6 1507 aa18.29■□□□□ 0.52
NPHP1-207ENST00000445609 MYO15BQ96JP2 1530 aa18.19■□□□□ 0.5
NPHP1-207ENST00000445609 NACADO15069 1562 aa18.14■□□□□ 0.49
NPHP1-207ENST00000445609 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
NPHP1-207ENST00000445609 SHROOM4Q9ULL8 1493 aa17.83■□□□□ 0.44
NPHP1-207ENST00000445609 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
NPHP1-207ENST00000445609 UNC13AQ9UPW8 1703 aa17.56■□□□□ 0.4
NPHP1-207ENST00000445609 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
NPHP1-207ENST00000445609 BICRAQ9NZM4 1560 aa17.47■□□□□ 0.39
NPHP1-207ENST00000445609 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
NPHP1-207ENST00000445609 BAZ1AQ9NRL2 1556 aaPredicted RBP17.09■□□□□ 0.33
NPHP1-207ENST00000445609 SUPT5HO00267 1087 aaKnown RBP17.05■□□□□ 0.32
NPHP1-207ENST00000445609 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
NPHP1-207ENST00000445609 MROH2BQ7Z745 1585 aa17.05■□□□□ 0.32
NPHP1-207ENST00000445609 SMARCA4P51532 1647 aa17.02■□□□□ 0.32
NPHP1-207ENST00000445609 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
NPHP1-207ENST00000445609 WIZO95785 1651 aa16.87■□□□□ 0.29
NPHP1-207ENST00000445609 ATAD2BQ9ULI0 1458 aa16.84■□□□□ 0.29
NPHP1-207ENST00000445609 PEG3Q9GZU2 1588 aa16.84■□□□□ 0.29
NPHP1-207ENST00000445609 SMARCA2P51531 1590 aa16.83■□□□□ 0.28
NPHP1-207ENST00000445609 CC2D2AQ9P2K1 1620 aa16.79■□□□□ 0.28
NPHP1-207ENST00000445609 NCAPD3P42695 1498 aa16.76■□□□□ 0.27
NPHP1-207ENST00000445609 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
NPHP1-207ENST00000445609 TOP2AP11388 1531 aaKnown RBP16.72■□□□□ 0.27
NPHP1-207ENST00000445609 HMGXB3Q12766 1538 aa16.69■□□□□ 0.26
NPHP1-207ENST00000445609 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
NPHP1-207ENST00000445609 CCDC88BA6NC98 1476 aa16.56■□□□□ 0.24
NPHP1-207ENST00000445609 CADPSQ9ULU8 1353 aa16.32■□□□□ 0.2
NPHP1-207ENST00000445609 CFTRP13569 1480 aa16.31■□□□□ 0.2
NPHP1-207ENST00000445609 NESP48681 1621 aa16.21■□□□□ 0.19
NPHP1-207ENST00000445609 LAMC3Q9Y6N6 1575 aa16.21■□□□□ 0.19
NPHP1-207ENST00000445609 CHIC1Q5VXU3 224 aa16.18■□□□□ 0.18
NPHP1-207ENST00000445609 PDS5BQ9NTI5 1447 aa16.13■□□□□ 0.17
NPHP1-207ENST00000445609 FANCD2Q9BXW9 1451 aa16.11■□□□□ 0.17
NPHP1-207ENST00000445609 PRDM2Q13029 1718 aa16.1■□□□□ 0.17
NPHP1-207ENST00000445609 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
NPHP1-207ENST00000445609 TRIM41Q8WV44 630 aa16.07■□□□□ 0.16
NPHP1-207ENST00000445609 WRNQ14191 1432 aaPredicted RBP eCLIP16.07■□□□□ 0.16
NPHP1-207ENST00000445609 CEP164Q9UPV0 1460 aa16.04■□□□□ 0.16
NPHP1-207ENST00000445609 ERCC6Q03468 1493 aa15.98■□□□□ 0.15
NPHP1-207ENST00000445609 KIF21AQ7Z4S6 1674 aa15.97■□□□□ 0.15
NPHP1-207ENST00000445609 SYNJ1O43426 1573 aa15.96■□□□□ 0.15
NPHP1-207ENST00000445609 CUX1P39880 1505 aa15.96■□□□□ 0.15
NPHP1-207ENST00000445609 TOP2BQ02880 1626 aa15.93■□□□□ 0.14
NPHP1-207ENST00000445609 URB2Q14146 1524 aaKnown RBP15.91■□□□□ 0.14
NPHP1-207ENST00000445609 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
NPHP1-207ENST00000445609 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
NPHP1-207ENST00000445609 BIVM-ERCC5R4GMW8 1640 aa15.9■□□□□ 0.14
NPHP1-207ENST00000445609 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
NPHP1-207ENST00000445609 FGD5Q6ZNL6 1462 aa15.84■□□□□ 0.13
NPHP1-207ENST00000445609 WDR62O43379 1518 aa15.82■□□□□ 0.12
NPHP1-207ENST00000445609 POLA1P09884 1462 aaPredicted RBP15.81■□□□□ 0.12
NPHP1-207ENST00000445609 THOC2Q8NI27 1593 aaKnown RBP15.8■□□□□ 0.12
NPHP1-207ENST00000445609 SOGA1O94964 1423 aa15.78■□□□□ 0.12
NPHP1-207ENST00000445609 RAD54L2Q9Y4B4 1467 aa15.74■□□□□ 0.11
NPHP1-207ENST00000445609 FAM9AQ8IZU1 332 aaPredicted RBP15.74■□□□□ 0.11
NPHP1-207ENST00000445609 CUX2O14529 1486 aa15.72■□□□□ 0.11
NPHP1-207ENST00000445609 EEA1Q15075 1411 aa15.71■□□□□ 0.11
NPHP1-207ENST00000445609 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
NPHP1-207ENST00000445609 RUSC2Q8N2Y8 1516 aa15.7■□□□□ 0.1
NPHP1-207ENST00000445609 KIF27Q86VH2 1401 aa15.7■□□□□ 0.1
NPHP1-207ENST00000445609 IFT140Q96RY7 1462 aa15.68■□□□□ 0.1
NPHP1-207ENST00000445609 CSRNP3Q8WYN3 585 aa15.66■□□□□ 0.1
NPHP1-207ENST00000445609 TARBP1Q13395 1621 aaKnown RBP15.66■□□□□ 0.1
NPHP1-207ENST00000445609 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
NPHP1-207ENST00000445609 WDR97A6NE52 1622 aa15.61■□□□□ 0.09
NPHP1-207ENST00000445609 IGF1RP08069 1367 aa15.59■□□□□ 0.09
NPHP1-207ENST00000445609 GAPVD1Q14C86 1478 aa15.59■□□□□ 0.09
NPHP1-207ENST00000445609 ZNF608Q9ULD9 1512 aaPredicted RBP15.58■□□□□ 0.09
NPHP1-207ENST00000445609 AQRO60306 1485 aaKnown RBP eCLIP15.58■□□□□ 0.08
NPHP1-207ENST00000445609 ABCA5Q8WWZ7 1642 aa15.56■□□□□ 0.08
NPHP1-207ENST00000445609 LOC105371045A0A1W2PR82 267 aa15.54■□□□□ 0.08
NPHP1-207ENST00000445609 ERICH3Q5RHP9 1530 aa15.51■□□□□ 0.07
NPHP1-207ENST00000445609 GRIN2BQ13224 1484 aa15.51■□□□□ 0.07
NPHP1-207ENST00000445609 EHMT2Q96KQ7 1210 aa15.51■□□□□ 0.07
NPHP1-207ENST00000445609 PRXQ9BXM0 1461 aa15.5■□□□□ 0.07
NPHP1-207ENST00000445609 CARMIL1Q5VZK9 1371 aa15.5■□□□□ 0.07
NPHP1-207ENST00000445609 EIF4G3O43432 1585 aaKnown RBP15.5■□□□□ 0.07
NPHP1-207ENST00000445609 KIF21BO75037 1637 aa15.47■□□□□ 0.07
NPHP1-207ENST00000445609 GOLGA3Q08378 1498 aa15.46■□□□□ 0.06
NPHP1-207ENST00000445609 RAPGEF2Q9Y4G8 1499 aa15.45■□□□□ 0.06
NPHP1-207ENST00000445609 CUL7Q14999 1698 aa15.44■□□□□ 0.06
NPHP1-207ENST00000445609 PBRM1Q86U86 1689 aa15.44■□□□□ 0.06
NPHP1-207ENST00000445609 UBTFP17480 764 aaKnown RBP15.43■□□□□ 0.06
NPHP1-207ENST00000445609 FHAD1B1AJZ9 1412 aa15.42■□□□□ 0.06
NPHP1-207ENST00000445609 SNAPC4Q5SXM2 1469 aa15.42■□□□□ 0.06
NPHP1-207ENST00000445609 MAGI1Q96QZ7 1491 aaPredicted RBP15.41■□□□□ 0.06
NPHP1-207ENST00000445609 ADAMTS12P58397 1594 aa15.38■□□□□ 0.05
NPHP1-207ENST00000445609 TNIKQ9UKE5 1360 aa15.37■□□□□ 0.05
NPHP1-207ENST00000445609 CHMP7Q8WUX9 453 aaPredicted RBP15.36■□□□□ 0.05
NPHP1-207ENST00000445609 SYNJ2O15056 1496 aa15.35■□□□□ 0.05
NPHP1-207ENST00000445609 FBLN2P98095 1184 aa15.34■□□□□ 0.05
NPHP1-207ENST00000445609 GRIN2AQ12879 1464 aa15.3■□□□□ 0.04
NPHP1-207ENST00000445609 CEP162Q5TB80 1403 aa15.25■□□□□ 0.03
NPHP1-207ENST00000445609 RANGAP1P46060 587 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms