RNA–Protein interactions for RNA: ENST00000445295.1

AP4M1-210, Transcript of adaptor related protein complex 4 subunit mu 1, humanhuman

TSL 3

Gene AP4M1, Length 678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4M1-210ENST00000445295 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.58
AP4M1-210ENST00000445295 CCDC180Q9P1Z9 1646 aa27.66■■■□□ 2.02
AP4M1-210ENST00000445295 ABCC9O60706 1549 aa26.95■■□□□ 1.9
AP4M1-210ENST00000445295 NACADO15069 1562 aa26■■□□□ 1.75
AP4M1-210ENST00000445295 RB1CC1Q8TDY2 1594 aa26■■□□□ 1.75
AP4M1-210ENST00000445295 DCAF8L2P0C7V8 631 aa25.99■■□□□ 1.75
AP4M1-210ENST00000445295 ZCCHC6Q5VYS8 1495 aaKnown RBP25.96■■□□□ 1.75
AP4M1-210ENST00000445295 MYO15BQ96JP2 1530 aa25.89■■□□□ 1.74
AP4M1-210ENST00000445295 DCAF1Q9Y4B6 1507 aa25.8■■□□□ 1.72
AP4M1-210ENST00000445295 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
AP4M1-210ENST00000445295 SCRIBQ14160 1630 aa25.2■■□□□ 1.62
AP4M1-210ENST00000445295 PABPN1Q86U42 306 aaKnown RBP eCLIP25.19■■□□□ 1.62
AP4M1-210ENST00000445295 BICRAQ9NZM4 1560 aa25.16■■□□□ 1.62
AP4M1-210ENST00000445295 SHROOM4Q9ULL8 1493 aa24.99■■□□□ 1.59
AP4M1-210ENST00000445295 DNAJC5BQ9UF47 199 aa24.61■■□□□ 1.53
AP4M1-210ENST00000445295 EIF4G1Q04637 1599 aaKnown RBP24.51■■□□□ 1.51
AP4M1-210ENST00000445295 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.49
AP4M1-210ENST00000445295 CECR2Q9BXF3 1484 aa24.22■■□□□ 1.47
AP4M1-210ENST00000445295 BAZ1AQ9NRL2 1556 aaPredicted RBP24.15■■□□□ 1.46
AP4M1-210ENST00000445295 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
AP4M1-210ENST00000445295 SMARCA2P51531 1590 aa24■■□□□ 1.43
AP4M1-210ENST00000445295 ATAD2BQ9ULI0 1458 aa24■■□□□ 1.43
AP4M1-210ENST00000445295 NCAPD3P42695 1498 aa23.98■■□□□ 1.43
AP4M1-210ENST00000445295 MROH2BQ7Z745 1585 aa23.97■■□□□ 1.43
AP4M1-210ENST00000445295 PEG3Q9GZU2 1588 aa23.91■■□□□ 1.42
AP4M1-210ENST00000445295 HMGXB3Q12766 1538 aa23.87■■□□□ 1.41
AP4M1-210ENST00000445295 BAZ1BQ9UIG0 1483 aaKnown RBP23.81■■□□□ 1.4
AP4M1-210ENST00000445295 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
AP4M1-210ENST00000445295 WIZO95785 1651 aa23.71■■□□□ 1.39
AP4M1-210ENST00000445295 TOP2AP11388 1531 aaKnown RBP23.5■■□□□ 1.35
AP4M1-210ENST00000445295 LAMC3Q9Y6N6 1575 aa23.34■■□□□ 1.33
AP4M1-210ENST00000445295 NESP48681 1621 aa23.32■■□□□ 1.32
AP4M1-210ENST00000445295 CADPSQ9ULU8 1353 aa23.29■■□□□ 1.32
AP4M1-210ENST00000445295 ERCC6Q03468 1493 aa23.26■■□□□ 1.31
AP4M1-210ENST00000445295 SUPT5HO00267 1087 aaKnown RBP23.21■■□□□ 1.31
AP4M1-210ENST00000445295 CCDC88BA6NC98 1476 aa23.21■■□□□ 1.31
AP4M1-210ENST00000445295 PDS5BQ9NTI5 1447 aa23.2■■□□□ 1.3
AP4M1-210ENST00000445295 CFTRP13569 1480 aa23.17■■□□□ 1.3
AP4M1-210ENST00000445295 KIF21AQ7Z4S6 1674 aa23.05■■□□□ 1.28
AP4M1-210ENST00000445295 FANCD2Q9BXW9 1451 aa23.01■■□□□ 1.27
AP4M1-210ENST00000445295 CUX2O14529 1486 aa22.99■■□□□ 1.27
AP4M1-210ENST00000445295 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
AP4M1-210ENST00000445295 PRDM2Q13029 1718 aa22.97■■□□□ 1.27
AP4M1-210ENST00000445295 THOC2Q8NI27 1593 aaKnown RBP22.97■■□□□ 1.27
AP4M1-210ENST00000445295 MRC2Q9UBG0 1479 aa22.93■■□□□ 1.26
AP4M1-210ENST00000445295 WDR62O43379 1518 aa22.84■■□□□ 1.25
AP4M1-210ENST00000445295 URB2Q14146 1524 aaKnown RBP22.75■■□□□ 1.23
AP4M1-210ENST00000445295 ABCC8Q09428 1581 aa22.71■■□□□ 1.23
AP4M1-210ENST00000445295 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
AP4M1-210ENST00000445295 DNMBPQ6XZF7 1577 aa22.63■■□□□ 1.21
AP4M1-210ENST00000445295 IFT140Q96RY7 1462 aa22.51■■□□□ 1.19
AP4M1-210ENST00000445295 CUX1P39880 1505 aa22.49■■□□□ 1.19
AP4M1-210ENST00000445295 POLA1P09884 1462 aaPredicted RBP22.46■■□□□ 1.19
AP4M1-210ENST00000445295 FGD5Q6ZNL6 1462 aa22.41■■□□□ 1.18
AP4M1-210ENST00000445295 WRNQ14191 1432 aaPredicted RBP eCLIP22.41■■□□□ 1.18
AP4M1-210ENST00000445295 SOGA1O94964 1423 aa22.39■■□□□ 1.17
AP4M1-210ENST00000445295 AEBP2Q6ZN18 517 aaPredicted RBP22.38■■□□□ 1.17
AP4M1-210ENST00000445295 TARBP1Q13395 1621 aaKnown RBP22.38■■□□□ 1.17
AP4M1-210ENST00000445295 ZNF608Q9ULD9 1512 aaPredicted RBP22.35■■□□□ 1.17
AP4M1-210ENST00000445295 TOP2BQ02880 1626 aa22.34■■□□□ 1.17
AP4M1-210ENST00000445295 RAD54L2Q9Y4B4 1467 aa22.34■■□□□ 1.17
AP4M1-210ENST00000445295 BIVM-ERCC5R4GMW8 1640 aa22.33■■□□□ 1.17
AP4M1-210ENST00000445295 SYNJ1O43426 1573 aa22.31■■□□□ 1.16
AP4M1-210ENST00000445295 EIF4G3O43432 1585 aaKnown RBP22.28■■□□□ 1.16
AP4M1-210ENST00000445295 WDR97A6NE52 1622 aa22.27■■□□□ 1.16
AP4M1-210ENST00000445295 AQRO60306 1485 aaKnown RBP eCLIP22.24■■□□□ 1.15
AP4M1-210ENST00000445295 TDRD9Q8NDG6 1382 aaKnown RBP22.23■■□□□ 1.15
AP4M1-210ENST00000445295 ABCA10Q8WWZ4 1543 aa22.22■■□□□ 1.15
AP4M1-210ENST00000445295 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
AP4M1-210ENST00000445295 GAPVD1Q14C86 1478 aa22.13■■□□□ 1.13
AP4M1-210ENST00000445295 GRIN2BQ13224 1484 aa22.12■■□□□ 1.13
AP4M1-210ENST00000445295 ABCA5Q8WWZ7 1642 aa22.1■■□□□ 1.13
AP4M1-210ENST00000445295 OSCARQ8IYS5 282 aa22.06■■□□□ 1.12
AP4M1-210ENST00000445295 MAGI1Q96QZ7 1491 aaPredicted RBP22.06■■□□□ 1.12
AP4M1-210ENST00000445295 SNAPC4Q5SXM2 1469 aa22.05■■□□□ 1.12
AP4M1-210ENST00000445295 PBRM1Q86U86 1689 aa22.04■■□□□ 1.12
AP4M1-210ENST00000445295 FBLN2P98095 1184 aa21.99■■□□□ 1.11
AP4M1-210ENST00000445295 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
AP4M1-210ENST00000445295 SYNJ2O15056 1496 aa21.96■■□□□ 1.11
AP4M1-210ENST00000445295 ERICH3Q5RHP9 1530 aa21.96■■□□□ 1.11
AP4M1-210ENST00000445295 CHMP7Q8WUX9 453 aaPredicted RBP21.96■■□□□ 1.11
AP4M1-210ENST00000445295 TRIM41Q8WV44 630 aa21.96■■□□□ 1.11
AP4M1-210ENST00000445295 CHD1O14646 1710 aa21.96■■□□□ 1.11
AP4M1-210ENST00000445295 ADAMTS12P58397 1594 aa21.89■■□□□ 1.09
AP4M1-210ENST00000445295 FHAD1B1AJZ9 1412 aa21.89■■□□□ 1.09
AP4M1-210ENST00000445295 IGF1RP08069 1367 aa21.83■■□□□ 1.08
AP4M1-210ENST00000445295 GRIN2AQ12879 1464 aa21.83■■□□□ 1.08
AP4M1-210ENST00000445295 CUL7Q14999 1698 aa21.78■■□□□ 1.08
AP4M1-210ENST00000445295 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
AP4M1-210ENST00000445295 NUP160Q12769 1436 aa21.72■■□□□ 1.07
AP4M1-210ENST00000445295 CARMIL1Q5VZK9 1371 aa21.72■■□□□ 1.07
AP4M1-210ENST00000445295 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
AP4M1-210ENST00000445295 RUSC2Q8N2Y8 1516 aa21.7■■□□□ 1.07
AP4M1-210ENST00000445295 CEP170Q5SW79 1584 aa21.68■■□□□ 1.06
AP4M1-210ENST00000445295 ARHGEF11O15085 1522 aa21.67■■□□□ 1.06
AP4M1-210ENST00000445295 RIMBP3CA6NJZ7 1639 aa21.64■■□□□ 1.05
AP4M1-210ENST00000445295 RIMBP3BA6NNM3 1639 aa21.64■■□□□ 1.05
AP4M1-210ENST00000445295 RIMBP3Q9UFD9 1639 aa21.64■■□□□ 1.05
AP4M1-210ENST00000445295 EEA1Q15075 1411 aa21.62■■□□□ 1.05
AP4M1-210ENST00000445295 RAPGEF2Q9Y4G8 1499 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms