RNA–Protein interactions for RNA: ENST00000445019.5

GPATCH3-202, Transcript of G-patch domain containing 3, humanhuman

TSL 3

Gene GPATCH3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-202ENST00000445019 NISCHQ9Y2I1 1504 aa33.01■■■□□ 2.87
GPATCH3-202ENST00000445019 CCDC180Q9P1Z9 1646 aa29.31■■■□□ 2.28
GPATCH3-202ENST00000445019 ABCC9O60706 1549 aa28.47■■■□□ 2.15
GPATCH3-202ENST00000445019 ZCCHC6Q5VYS8 1495 aaKnown RBP27.54■■■□□ 2
GPATCH3-202ENST00000445019 NACADO15069 1562 aa27.52■■■□□ 2
GPATCH3-202ENST00000445019 RB1CC1Q8TDY2 1594 aa27.51■■□□□ 1.99
GPATCH3-202ENST00000445019 DCAF8L2P0C7V8 631 aa27.45■■□□□ 1.98
GPATCH3-202ENST00000445019 MYO15BQ96JP2 1530 aa27.43■■□□□ 1.98
GPATCH3-202ENST00000445019 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
GPATCH3-202ENST00000445019 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
GPATCH3-202ENST00000445019 SCRIBQ14160 1630 aa26.7■■□□□ 1.86
GPATCH3-202ENST00000445019 BICRAQ9NZM4 1560 aa26.63■■□□□ 1.85
GPATCH3-202ENST00000445019 PABPN1Q86U42 306 aaKnown RBP eCLIP26.6■■□□□ 1.85
GPATCH3-202ENST00000445019 SHROOM4Q9ULL8 1493 aa26.45■■□□□ 1.82
GPATCH3-202ENST00000445019 DNAJC5BQ9UF47 199 aa25.94■■□□□ 1.74
GPATCH3-202ENST00000445019 EIF4G1Q04637 1599 aaKnown RBP25.93■■□□□ 1.74
GPATCH3-202ENST00000445019 CC2D2AQ9P2K1 1620 aa25.77■■□□□ 1.72
GPATCH3-202ENST00000445019 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
GPATCH3-202ENST00000445019 BAZ1AQ9NRL2 1556 aaPredicted RBP25.6■■□□□ 1.69
GPATCH3-202ENST00000445019 SMARCA4P51532 1647 aa25.58■■□□□ 1.69
GPATCH3-202ENST00000445019 MROH2BQ7Z745 1585 aa25.42■■□□□ 1.66
GPATCH3-202ENST00000445019 SMARCA2P51531 1590 aa25.4■■□□□ 1.66
GPATCH3-202ENST00000445019 ATAD2BQ9ULI0 1458 aa25.4■■□□□ 1.66
GPATCH3-202ENST00000445019 NCAPD3P42695 1498 aa25.38■■□□□ 1.65
GPATCH3-202ENST00000445019 PEG3Q9GZU2 1588 aa25.35■■□□□ 1.65
GPATCH3-202ENST00000445019 HMGXB3Q12766 1538 aa25.28■■□□□ 1.64
GPATCH3-202ENST00000445019 BAZ1BQ9UIG0 1483 aaKnown RBP25.21■■□□□ 1.63
GPATCH3-202ENST00000445019 RSF1Q96T23 1441 aaPredicted RBP25.19■■□□□ 1.62
GPATCH3-202ENST00000445019 WIZO95785 1651 aa25.14■■□□□ 1.62
GPATCH3-202ENST00000445019 TOP2AP11388 1531 aaKnown RBP24.93■■□□□ 1.58
GPATCH3-202ENST00000445019 LAMC3Q9Y6N6 1575 aa24.69■■□□□ 1.54
GPATCH3-202ENST00000445019 NESP48681 1621 aa24.67■■□□□ 1.54
GPATCH3-202ENST00000445019 CADPSQ9ULU8 1353 aa24.64■■□□□ 1.53
GPATCH3-202ENST00000445019 SUPT5HO00267 1087 aaKnown RBP24.63■■□□□ 1.53
GPATCH3-202ENST00000445019 CCDC88BA6NC98 1476 aa24.61■■□□□ 1.53
GPATCH3-202ENST00000445019 ERCC6Q03468 1493 aa24.55■■□□□ 1.52
GPATCH3-202ENST00000445019 CFTRP13569 1480 aa24.53■■□□□ 1.52
GPATCH3-202ENST00000445019 PDS5BQ9NTI5 1447 aa24.52■■□□□ 1.52
GPATCH3-202ENST00000445019 KIF21AQ7Z4S6 1674 aa24.4■■□□□ 1.5
GPATCH3-202ENST00000445019 PRDM2Q13029 1718 aa24.37■■□□□ 1.49
GPATCH3-202ENST00000445019 FANCD2Q9BXW9 1451 aa24.35■■□□□ 1.49
GPATCH3-202ENST00000445019 CEP164Q9UPV0 1460 aa24.32■■□□□ 1.48
GPATCH3-202ENST00000445019 THOC2Q8NI27 1593 aaKnown RBP24.3■■□□□ 1.48
GPATCH3-202ENST00000445019 CUX2O14529 1486 aa24.26■■□□□ 1.47
GPATCH3-202ENST00000445019 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
GPATCH3-202ENST00000445019 WDR62O43379 1518 aa24.17■■□□□ 1.46
GPATCH3-202ENST00000445019 URB2Q14146 1524 aaKnown RBP24.09■■□□□ 1.45
GPATCH3-202ENST00000445019 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
GPATCH3-202ENST00000445019 TOPBP1Q92547 1522 aa23.98■■□□□ 1.43
GPATCH3-202ENST00000445019 DNMBPQ6XZF7 1577 aa23.98■■□□□ 1.43
GPATCH3-202ENST00000445019 CUX1P39880 1505 aa23.84■■□□□ 1.41
GPATCH3-202ENST00000445019 IFT140Q96RY7 1462 aa23.81■■□□□ 1.4
GPATCH3-202ENST00000445019 POLA1P09884 1462 aaPredicted RBP23.79■■□□□ 1.4
GPATCH3-202ENST00000445019 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
GPATCH3-202ENST00000445019 FGD5Q6ZNL6 1462 aa23.75■■□□□ 1.39
GPATCH3-202ENST00000445019 TOP2BQ02880 1626 aa23.7■■□□□ 1.39
GPATCH3-202ENST00000445019 TARBP1Q13395 1621 aaKnown RBP23.7■■□□□ 1.39
GPATCH3-202ENST00000445019 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.39
GPATCH3-202ENST00000445019 SOGA1O94964 1423 aa23.69■■□□□ 1.38
GPATCH3-202ENST00000445019 SYNJ1O43426 1573 aa23.68■■□□□ 1.38
GPATCH3-202ENST00000445019 RAD54L2Q9Y4B4 1467 aa23.65■■□□□ 1.38
GPATCH3-202ENST00000445019 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.37
GPATCH3-202ENST00000445019 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
GPATCH3-202ENST00000445019 WDR97A6NE52 1622 aa23.59■■□□□ 1.37
GPATCH3-202ENST00000445019 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
GPATCH3-202ENST00000445019 AQRO60306 1485 aaKnown RBP eCLIP23.53■■□□□ 1.36
GPATCH3-202ENST00000445019 TDRD9Q8NDG6 1382 aaKnown RBP23.51■■□□□ 1.35
GPATCH3-202ENST00000445019 ABCA5Q8WWZ7 1642 aa23.44■■□□□ 1.34
GPATCH3-202ENST00000445019 GAPVD1Q14C86 1478 aa23.43■■□□□ 1.34
GPATCH3-202ENST00000445019 GRIN2BQ13224 1484 aa23.41■■□□□ 1.34
GPATCH3-202ENST00000445019 PBRM1Q86U86 1689 aa23.36■■□□□ 1.33
GPATCH3-202ENST00000445019 MAGI1Q96QZ7 1491 aaPredicted RBP23.35■■□□□ 1.33
GPATCH3-202ENST00000445019 SNAPC4Q5SXM2 1469 aa23.33■■□□□ 1.33
GPATCH3-202ENST00000445019 TRIM41Q8WV44 630 aa23.29■■□□□ 1.32
GPATCH3-202ENST00000445019 DNAJC5Q9H3Z4 198 aa23.29■■□□□ 1.32
GPATCH3-202ENST00000445019 ERICH3Q5RHP9 1530 aa23.28■■□□□ 1.32
GPATCH3-202ENST00000445019 KIF27Q86VH2 1401 aa23.27■■□□□ 1.32
GPATCH3-202ENST00000445019 OSCARQ8IYS5 282 aa23.26■■□□□ 1.31
GPATCH3-202ENST00000445019 CHD1O14646 1710 aa23.24■■□□□ 1.31
GPATCH3-202ENST00000445019 SYNJ2O15056 1496 aa23.24■■□□□ 1.31
GPATCH3-202ENST00000445019 FBLN2P98095 1184 aa23.21■■□□□ 1.31
GPATCH3-202ENST00000445019 ADAMTS12P58397 1594 aa23.19■■□□□ 1.3
GPATCH3-202ENST00000445019 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
GPATCH3-202ENST00000445019 FHAD1B1AJZ9 1412 aa23.17■■□□□ 1.3
GPATCH3-202ENST00000445019 IGF1RP08069 1367 aa23.13■■□□□ 1.29
GPATCH3-202ENST00000445019 GRIN2AQ12879 1464 aa23.11■■□□□ 1.29
GPATCH3-202ENST00000445019 CUL7Q14999 1698 aa23.09■■□□□ 1.29
GPATCH3-202ENST00000445019 CHIC1Q5VXU3 224 aa23.09■■□□□ 1.29
GPATCH3-202ENST00000445019 RUSC2Q8N2Y8 1516 aa23.04■■□□□ 1.28
GPATCH3-202ENST00000445019 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
GPATCH3-202ENST00000445019 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
GPATCH3-202ENST00000445019 NUP160Q12769 1436 aa22.99■■□□□ 1.27
GPATCH3-202ENST00000445019 CEP170Q5SW79 1584 aa22.97■■□□□ 1.27
GPATCH3-202ENST00000445019 EEA1Q15075 1411 aa22.95■■□□□ 1.26
GPATCH3-202ENST00000445019 RAPGEF2Q9Y4G8 1499 aa22.9■■□□□ 1.26
GPATCH3-202ENST00000445019 ARHGEF11O15085 1522 aa22.88■■□□□ 1.25
GPATCH3-202ENST00000445019 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
GPATCH3-202ENST00000445019 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
GPATCH3-202ENST00000445019 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
GPATCH3-202ENST00000445019 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms