RNA–Protein interactions for RNA: ENST00000444872.3

MED27-203, Transcript of mediator complex subunit 27, humanhuman

TSL 5

Gene MED27, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED27-203ENST00000444872 NISCHQ9Y2I1 1504 aa33.82■■■■□ 3
MED27-203ENST00000444872 ABCC9O60706 1549 aa31.19■■■□□ 2.58
MED27-203ENST00000444872 CCDC180Q9P1Z9 1646 aa30.47■■■□□ 2.47
MED27-203ENST00000444872 DNAJC5BQ9UF47 199 aa29.88■■■□□ 2.37
MED27-203ENST00000444872 RB1CC1Q8TDY2 1594 aa29.34■■■□□ 2.29
MED27-203ENST00000444872 NACADO15069 1562 aa29.02■■■□□ 2.24
MED27-203ENST00000444872 PABPN1Q86U42 306 aaKnown RBP eCLIP29.02■■■□□ 2.24
MED27-203ENST00000444872 DCAF8L2P0C7V8 631 aa28.87■■■□□ 2.21
MED27-203ENST00000444872 UNC13AQ9UPW8 1703 aa28.6■■■□□ 2.17
MED27-203ENST00000444872 BICRAQ9NZM4 1560 aa28.56■■■□□ 2.16
MED27-203ENST00000444872 MYO15BQ96JP2 1530 aa28.44■■■□□ 2.14
MED27-203ENST00000444872 CECR2Q9BXF3 1484 aa28.15■■■□□ 2.1
MED27-203ENST00000444872 CC2D2AQ9P2K1 1620 aa28.08■■■□□ 2.09
MED27-203ENST00000444872 SHROOM4Q9ULL8 1493 aa28.06■■■□□ 2.08
MED27-203ENST00000444872 EIF4G1Q04637 1599 aaKnown RBP27.89■■■□□ 2.05
MED27-203ENST00000444872 ZCCHC6Q5VYS8 1495 aaKnown RBP27.89■■■□□ 2.05
MED27-203ENST00000444872 DCAF1Q9Y4B6 1507 aa27.87■■■□□ 2.05
MED27-203ENST00000444872 DNAJC5Q9H3Z4 198 aa27.81■■■□□ 2.04
MED27-203ENST00000444872 SCRIBQ14160 1630 aa27.81■■■□□ 2.04
MED27-203ENST00000444872 CUX2O14529 1486 aa27.06■■□□□ 1.92
MED27-203ENST00000444872 ERCC6Q03468 1493 aa26.93■■□□□ 1.9
MED27-203ENST00000444872 NCAPD3P42695 1498 aa26.87■■□□□ 1.89
MED27-203ENST00000444872 ATAD2BQ9ULI0 1458 aa26.7■■□□□ 1.87
MED27-203ENST00000444872 NESP48681 1621 aa26.63■■□□□ 1.85
MED27-203ENST00000444872 HMGXB3Q12766 1538 aa26.54■■□□□ 1.84
MED27-203ENST00000444872 SMARCA2P51531 1590 aa26.53■■□□□ 1.84
MED27-203ENST00000444872 SMARCA4P51532 1647 aa26.46■■□□□ 1.83
MED27-203ENST00000444872 THOC2Q8NI27 1593 aaKnown RBP26.39■■□□□ 1.82
MED27-203ENST00000444872 BAZ1BQ9UIG0 1483 aaKnown RBP26.37■■□□□ 1.81
MED27-203ENST00000444872 TRIM41Q8WV44 630 aa26.33■■□□□ 1.81
MED27-203ENST00000444872 LAMC3Q9Y6N6 1575 aa26.26■■□□□ 1.79
MED27-203ENST00000444872 BAZ1AQ9NRL2 1556 aaPredicted RBP26.24■■□□□ 1.79
MED27-203ENST00000444872 PEG3Q9GZU2 1588 aa26.2■■□□□ 1.79
MED27-203ENST00000444872 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
MED27-203ENST00000444872 KIF21AQ7Z4S6 1674 aa26.15■■□□□ 1.78
MED27-203ENST00000444872 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
MED27-203ENST00000444872 CADPSQ9ULU8 1353 aa26.03■■□□□ 1.76
MED27-203ENST00000444872 MRC2Q9UBG0 1479 aa25.99■■□□□ 1.75
MED27-203ENST00000444872 WDR62O43379 1518 aa25.93■■□□□ 1.74
MED27-203ENST00000444872 OSCARQ8IYS5 282 aa25.81■■□□□ 1.72
MED27-203ENST00000444872 CEP164Q9UPV0 1460 aa25.76■■□□□ 1.71
MED27-203ENST00000444872 FANCD2Q9BXW9 1451 aa25.71■■□□□ 1.71
MED27-203ENST00000444872 WIZO95785 1651 aa25.68■■□□□ 1.7
MED27-203ENST00000444872 CFTRP13569 1480 aa25.6■■□□□ 1.69
MED27-203ENST00000444872 URB2Q14146 1524 aaKnown RBP25.54■■□□□ 1.68
MED27-203ENST00000444872 RIMBP3CA6NJZ7 1639 aa25.45■■□□□ 1.66
MED27-203ENST00000444872 RIMBP3BA6NNM3 1639 aa25.45■■□□□ 1.66
MED27-203ENST00000444872 RIMBP3Q9UFD9 1639 aa25.45■■□□□ 1.66
MED27-203ENST00000444872 RSF1Q96T23 1441 aaPredicted RBP25.35■■□□□ 1.65
MED27-203ENST00000444872 ARHGEF11O15085 1522 aa25.34■■□□□ 1.65
MED27-203ENST00000444872 ZNF608Q9ULD9 1512 aaPredicted RBP25.34■■□□□ 1.65
MED27-203ENST00000444872 TOP2AP11388 1531 aaKnown RBP25.32■■□□□ 1.64
MED27-203ENST00000444872 IFT140Q96RY7 1462 aa25.28■■□□□ 1.64
MED27-203ENST00000444872 CYB5RLQ6IPT4 315 aa25.27■■□□□ 1.64
MED27-203ENST00000444872 TRHP20396 242 aaPredicted RBP25.15■■□□□ 1.62
MED27-203ENST00000444872 TOPBP1Q92547 1522 aa25.15■■□□□ 1.62
MED27-203ENST00000444872 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
MED27-203ENST00000444872 PRDM2Q13029 1718 aa25.09■■□□□ 1.61
MED27-203ENST00000444872 ARAP1Q96P48 1450 aa25.08■■□□□ 1.6
MED27-203ENST00000444872 EIF4G3O43432 1585 aaKnown RBP25.07■■□□□ 1.6
MED27-203ENST00000444872 AQRO60306 1485 aaKnown RBP eCLIP25.05■■□□□ 1.6
MED27-203ENST00000444872 ABCC8Q09428 1581 aa25.02■■□□□ 1.6
MED27-203ENST00000444872 FBLN2P98095 1184 aa25.01■■□□□ 1.59
MED27-203ENST00000444872 DNMBPQ6XZF7 1577 aa24.97■■□□□ 1.59
MED27-203ENST00000444872 CHD1O14646 1710 aa24.96■■□□□ 1.59
MED27-203ENST00000444872 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
MED27-203ENST00000444872 POLA1P09884 1462 aaPredicted RBP24.87■■□□□ 1.57
MED27-203ENST00000444872 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
MED27-203ENST00000444872 RAD54L2Q9Y4B4 1467 aa24.82■■□□□ 1.56
MED27-203ENST00000444872 AEBP2Q6ZN18 517 aaPredicted RBP24.81■■□□□ 1.56
MED27-203ENST00000444872 SOGA1O94964 1423 aa24.77■■□□□ 1.56
MED27-203ENST00000444872 CLASP1Q7Z460 1538 aa24.74■■□□□ 1.55
MED27-203ENST00000444872 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
MED27-203ENST00000444872 CHMP7Q8WUX9 453 aaPredicted RBP24.73■■□□□ 1.55
MED27-203ENST00000444872 SYNJ1O43426 1573 aa24.63■■□□□ 1.53
MED27-203ENST00000444872 FGD5Q6ZNL6 1462 aa24.62■■□□□ 1.53
MED27-203ENST00000444872 MAGI1Q96QZ7 1491 aaPredicted RBP24.62■■□□□ 1.53
MED27-203ENST00000444872 GRIN2BQ13224 1484 aa24.59■■□□□ 1.53
MED27-203ENST00000444872 WDR97A6NE52 1622 aa24.58■■□□□ 1.53
MED27-203ENST00000444872 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
MED27-203ENST00000444872 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
MED27-203ENST00000444872 CUX1P39880 1505 aa24.51■■□□□ 1.51
MED27-203ENST00000444872 ERCC6L2Q5T890 1561 aa24.35■■□□□ 1.49
MED27-203ENST00000444872 PBRM1Q86U86 1689 aa24.33■■□□□ 1.49
MED27-203ENST00000444872 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
MED27-203ENST00000444872 ABCA5Q8WWZ7 1642 aa24.27■■□□□ 1.48
MED27-203ENST00000444872 GRIN2AQ12879 1464 aa24.26■■□□□ 1.47
MED27-203ENST00000444872 NUP160Q12769 1436 aa24.23■■□□□ 1.47
MED27-203ENST00000444872 CEP170Q5SW79 1584 aa24.23■■□□□ 1.47
MED27-203ENST00000444872 ADAMTS12P58397 1594 aa24.13■■□□□ 1.45
MED27-203ENST00000444872 WRNQ14191 1432 aaPredicted RBP eCLIP24.11■■□□□ 1.45
MED27-203ENST00000444872 SHROOM2Q13796 1616 aa24.11■■□□□ 1.45
MED27-203ENST00000444872 FHAD1B1AJZ9 1412 aa24.1■■□□□ 1.45
MED27-203ENST00000444872 KIF13AQ9H1H9 1805 aa24.07■■□□□ 1.44
MED27-203ENST00000444872 PRG4Q92954 1404 aaPredicted RBP24.05■■□□□ 1.44
MED27-203ENST00000444872 FAM69CQ0P6D2 419 aa24.04■■□□□ 1.44
MED27-203ENST00000444872 JPH4Q96JJ6 628 aa24.03■■□□□ 1.44
MED27-203ENST00000444872 ABCC10Q5T3U5 1492 aa23.98■■□□□ 1.43
MED27-203ENST00000444872 ERICH3Q5RHP9 1530 aa23.95■■□□□ 1.43
MED27-203ENST00000444872 KDM4FA0A1W2PPD8 638 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms