RNA–Protein interactions for RNA: ENST00000444822.5

PCYT1A-211, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-211ENST00000444822 NISCHQ9Y2I1 1504 aa38.73■■■■□ 3.79
PCYT1A-211ENST00000444822 CCDC180Q9P1Z9 1646 aa34.48■■■■□ 3.11
PCYT1A-211ENST00000444822 ABCC9O60706 1549 aa33.53■■■□□ 2.96
PCYT1A-211ENST00000444822 RB1CC1Q8TDY2 1594 aa32.44■■■□□ 2.78
PCYT1A-211ENST00000444822 NACADO15069 1562 aa32.43■■■□□ 2.78
PCYT1A-211ENST00000444822 MYO15BQ96JP2 1530 aa32.32■■■□□ 2.76
PCYT1A-211ENST00000444822 ZCCHC6Q5VYS8 1495 aaKnown RBP32.27■■■□□ 2.76
PCYT1A-211ENST00000444822 DCAF8L2P0C7V8 631 aa32.26■■■□□ 2.75
PCYT1A-211ENST00000444822 DCAF1Q9Y4B6 1507 aa32.16■■■□□ 2.74
PCYT1A-211ENST00000444822 UNC13AQ9UPW8 1703 aa31.55■■■□□ 2.64
PCYT1A-211ENST00000444822 BICRAQ9NZM4 1560 aa31.32■■■□□ 2.6
PCYT1A-211ENST00000444822 PABPN1Q86U42 306 aaKnown RBP eCLIP31.32■■■□□ 2.6
PCYT1A-211ENST00000444822 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
PCYT1A-211ENST00000444822 SHROOM4Q9ULL8 1493 aa31.26■■■□□ 2.59
PCYT1A-211ENST00000444822 DNAJC5BQ9UF47 199 aa30.68■■■□□ 2.5
PCYT1A-211ENST00000444822 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
PCYT1A-211ENST00000444822 CC2D2AQ9P2K1 1620 aa30.38■■■□□ 2.45
PCYT1A-211ENST00000444822 CECR2Q9BXF3 1484 aa30.2■■■□□ 2.43
PCYT1A-211ENST00000444822 BAZ1AQ9NRL2 1556 aaPredicted RBP30.07■■■□□ 2.4
PCYT1A-211ENST00000444822 SMARCA4P51532 1647 aa30.02■■■□□ 2.4
PCYT1A-211ENST00000444822 SMARCA2P51531 1590 aa29.9■■■□□ 2.38
PCYT1A-211ENST00000444822 NCAPD3P42695 1498 aa29.9■■■□□ 2.38
PCYT1A-211ENST00000444822 ATAD2BQ9ULI0 1458 aa29.87■■■□□ 2.37
PCYT1A-211ENST00000444822 PEG3Q9GZU2 1588 aa29.81■■■□□ 2.36
PCYT1A-211ENST00000444822 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
PCYT1A-211ENST00000444822 HMGXB3Q12766 1538 aa29.76■■■□□ 2.36
PCYT1A-211ENST00000444822 BAZ1BQ9UIG0 1483 aaKnown RBP29.64■■■□□ 2.34
PCYT1A-211ENST00000444822 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
PCYT1A-211ENST00000444822 WIZO95785 1651 aa29.44■■■□□ 2.3
PCYT1A-211ENST00000444822 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
PCYT1A-211ENST00000444822 LAMC3Q9Y6N6 1575 aa29.12■■■□□ 2.25
PCYT1A-211ENST00000444822 CADPSQ9ULU8 1353 aa29.02■■■□□ 2.24
PCYT1A-211ENST00000444822 ERCC6Q03468 1493 aa29■■■□□ 2.23
PCYT1A-211ENST00000444822 NESP48681 1621 aa28.99■■■□□ 2.23
PCYT1A-211ENST00000444822 PDS5BQ9NTI5 1447 aa28.94■■■□□ 2.22
PCYT1A-211ENST00000444822 CFTRP13569 1480 aa28.85■■■□□ 2.21
PCYT1A-211ENST00000444822 CCDC88BA6NC98 1476 aa28.84■■■□□ 2.21
PCYT1A-211ENST00000444822 CUX2O14529 1486 aa28.75■■■□□ 2.19
PCYT1A-211ENST00000444822 SUPT5HO00267 1087 aaKnown RBP28.71■■■□□ 2.19
PCYT1A-211ENST00000444822 KIF21AQ7Z4S6 1674 aa28.69■■■□□ 2.18
PCYT1A-211ENST00000444822 FANCD2Q9BXW9 1451 aa28.65■■■□□ 2.18
PCYT1A-211ENST00000444822 CEP164Q9UPV0 1460 aa28.63■■■□□ 2.17
PCYT1A-211ENST00000444822 PRDM2Q13029 1718 aa28.63■■■□□ 2.17
PCYT1A-211ENST00000444822 THOC2Q8NI27 1593 aaKnown RBP28.62■■■□□ 2.17
PCYT1A-211ENST00000444822 MRC2Q9UBG0 1479 aa28.58■■■□□ 2.17
PCYT1A-211ENST00000444822 WDR62O43379 1518 aa28.48■■■□□ 2.15
PCYT1A-211ENST00000444822 ABCC8Q09428 1581 aa28.34■■■□□ 2.13
PCYT1A-211ENST00000444822 URB2Q14146 1524 aaKnown RBP28.3■■■□□ 2.12
PCYT1A-211ENST00000444822 DNMBPQ6XZF7 1577 aa28.18■■■□□ 2.1
PCYT1A-211ENST00000444822 TOPBP1Q92547 1522 aa28.18■■■□□ 2.1
PCYT1A-211ENST00000444822 IFT140Q96RY7 1462 aa28.06■■■□□ 2.08
PCYT1A-211ENST00000444822 CUX1P39880 1505 aa27.94■■■□□ 2.06
PCYT1A-211ENST00000444822 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
PCYT1A-211ENST00000444822 SOGA1O94964 1423 aa27.86■■■□□ 2.05
PCYT1A-211ENST00000444822 TARBP1Q13395 1621 aaKnown RBP27.86■■■□□ 2.05
PCYT1A-211ENST00000444822 FGD5Q6ZNL6 1462 aa27.86■■■□□ 2.05
PCYT1A-211ENST00000444822 WRNQ14191 1432 aaPredicted RBP eCLIP27.84■■■□□ 2.05
PCYT1A-211ENST00000444822 WDR97A6NE52 1622 aa27.81■■■□□ 2.04
PCYT1A-211ENST00000444822 TOP2BQ02880 1626 aa27.78■■■□□ 2.04
PCYT1A-211ENST00000444822 ZNF608Q9ULD9 1512 aaPredicted RBP27.78■■■□□ 2.04
PCYT1A-211ENST00000444822 BIVM-ERCC5R4GMW8 1640 aa27.77■■■□□ 2.04
PCYT1A-211ENST00000444822 DNAJC5Q9H3Z4 198 aa27.76■■■□□ 2.03
PCYT1A-211ENST00000444822 RAD54L2Q9Y4B4 1467 aa27.75■■■□□ 2.03
PCYT1A-211ENST00000444822 EIF4G3O43432 1585 aaKnown RBP27.73■■■□□ 2.03
PCYT1A-211ENST00000444822 SYNJ1O43426 1573 aa27.69■■■□□ 2.02
PCYT1A-211ENST00000444822 AQRO60306 1485 aaKnown RBP eCLIP27.66■■■□□ 2.021e-6■□□□□ 9.4
PCYT1A-211ENST00000444822 ABCA10Q8WWZ4 1543 aa27.66■■■□□ 2.02
PCYT1A-211ENST00000444822 TDRD9Q8NDG6 1382 aaKnown RBP27.62■■■□□ 2.01
PCYT1A-211ENST00000444822 OSCARQ8IYS5 282 aa27.56■■■□□ 2
PCYT1A-211ENST00000444822 GRIN2BQ13224 1484 aa27.56■■■□□ 2
PCYT1A-211ENST00000444822 GAPVD1Q14C86 1478 aa27.54■■■□□ 2
PCYT1A-211ENST00000444822 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■□□□ 1.99
PCYT1A-211ENST00000444822 ABCA5Q8WWZ7 1642 aa27.49■■□□□ 1.99
PCYT1A-211ENST00000444822 SNAPC4Q5SXM2 1469 aa27.44■■□□□ 1.98
PCYT1A-211ENST00000444822 PBRM1Q86U86 1689 aa27.43■■□□□ 1.98
PCYT1A-211ENST00000444822 SYNJ2O15056 1496 aa27.37■■□□□ 1.97
PCYT1A-211ENST00000444822 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
PCYT1A-211ENST00000444822 CHMP7Q8WUX9 453 aaPredicted RBP27.36■■□□□ 1.97
PCYT1A-211ENST00000444822 FBLN2P98095 1184 aa27.35■■□□□ 1.97
PCYT1A-211ENST00000444822 CHD1O14646 1710 aa27.34■■□□□ 1.97
PCYT1A-211ENST00000444822 KIF27Q86VH2 1401 aa27.31■■□□□ 1.96
PCYT1A-211ENST00000444822 FHAD1B1AJZ9 1412 aa27.26■■□□□ 1.95
PCYT1A-211ENST00000444822 ADAMTS12P58397 1594 aa27.22■■□□□ 1.95
PCYT1A-211ENST00000444822 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
PCYT1A-211ENST00000444822 GRIN2AQ12879 1464 aa27.17■■□□□ 1.94
PCYT1A-211ENST00000444822 IGF1RP08069 1367 aa27.14■■□□□ 1.94
PCYT1A-211ENST00000444822 CUL7Q14999 1698 aa27.12■■□□□ 1.93
PCYT1A-211ENST00000444822 CLASP1Q7Z460 1538 aa27.11■■□□□ 1.93
PCYT1A-211ENST00000444822 NUP160Q12769 1436 aa27.06■■□□□ 1.92
PCYT1A-211ENST00000444822 ARHGEF11O15085 1522 aa27.02■■□□□ 1.92
PCYT1A-211ENST00000444822 CARMIL1Q5VZK9 1371 aa26.99■■□□□ 1.91
PCYT1A-211ENST00000444822 RIMBP3CA6NJZ7 1639 aa26.99■■□□□ 1.91
PCYT1A-211ENST00000444822 RIMBP3BA6NNM3 1639 aa26.99■■□□□ 1.91
PCYT1A-211ENST00000444822 RIMBP3Q9UFD9 1639 aa26.99■■□□□ 1.91
PCYT1A-211ENST00000444822 CEP170Q5SW79 1584 aa26.97■■□□□ 1.91
PCYT1A-211ENST00000444822 EEA1Q15075 1411 aa26.89■■□□□ 1.89
PCYT1A-211ENST00000444822 RUSC2Q8N2Y8 1516 aa26.87■■□□□ 1.89
PCYT1A-211ENST00000444822 CHIC1Q5VXU3 224 aa26.86■■□□□ 1.89
PCYT1A-211ENST00000444822 RAPGEF2Q9Y4G8 1499 aa26.86■■□□□ 1.89
PCYT1A-211ENST00000444822 KIAA0586Q9BVV6 1533 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms