RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 NISCHQ9Y2I1 1504 aa26.92■■□□□ 1.9
HDAC8-215ENST00000444609 ABCC9O60706 1549 aa25.77■■□□□ 1.72
HDAC8-215ENST00000444609 DNAJC5BQ9UF47 199 aa25.33■■□□□ 1.65
HDAC8-215ENST00000444609 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
HDAC8-215ENST00000444609 DNAJC5Q9H3Z4 198 aa24.1■■□□□ 1.45
HDAC8-215ENST00000444609 RB1CC1Q8TDY2 1594 aa23.97■■□□□ 1.43
HDAC8-215ENST00000444609 PABPN1Q86U42 306 aaKnown RBP eCLIP23.9■■□□□ 1.42
HDAC8-215ENST00000444609 NACADO15069 1562 aa23.56■■□□□ 1.36
HDAC8-215ENST00000444609 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
HDAC8-215ENST00000444609 BICRAQ9NZM4 1560 aa23.34■■□□□ 1.33
HDAC8-215ENST00000444609 DCAF8L2P0C7V8 631 aa23.3■■□□□ 1.32
HDAC8-215ENST00000444609 UNC13AQ9UPW8 1703 aa23.27■■□□□ 1.32
HDAC8-215ENST00000444609 CC2D2AQ9P2K1 1620 aa23.17■■□□□ 1.3
HDAC8-215ENST00000444609 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
HDAC8-215ENST00000444609 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
HDAC8-215ENST00000444609 EIF4G1Q04637 1599 aaKnown RBP22.85■■□□□ 1.25
HDAC8-215ENST00000444609 CUX2O14529 1486 aa22.68■■□□□ 1.22
HDAC8-215ENST00000444609 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
HDAC8-215ENST00000444609 SCRIBQ14160 1630 aa22.34■■□□□ 1.17
HDAC8-215ENST00000444609 ERCC6Q03468 1493 aa22.31■■□□□ 1.16
HDAC8-215ENST00000444609 DCAF1Q9Y4B6 1507 aa22.16■■□□□ 1.14
HDAC8-215ENST00000444609 ZCCHC6Q5VYS8 1495 aaKnown RBP22.04■■□□□ 1.12
HDAC8-215ENST00000444609 NCAPD3P42695 1498 aa21.84■■□□□ 1.09
HDAC8-215ENST00000444609 NESP48681 1621 aa21.81■■□□□ 1.08
HDAC8-215ENST00000444609 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
HDAC8-215ENST00000444609 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.05
HDAC8-215ENST00000444609 OSCARQ8IYS5 282 aa21.55■■□□□ 1.04
HDAC8-215ENST00000444609 SMARCA2P51531 1590 aa21.52■■□□□ 1.04
HDAC8-215ENST00000444609 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
HDAC8-215ENST00000444609 AEBP2Q6ZN18 517 aaPredicted RBP21.45■■□□□ 1.02
HDAC8-215ENST00000444609 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
HDAC8-215ENST00000444609 LAMC3Q9Y6N6 1575 aa21.43■■□□□ 1.02
HDAC8-215ENST00000444609 BAZ1AQ9NRL2 1556 aaPredicted RBP21.39■■□□□ 1.01
HDAC8-215ENST00000444609 KIF21AQ7Z4S6 1674 aa21.34■■□□□ 1.01
HDAC8-215ENST00000444609 MRC2Q9UBG0 1479 aa21.27■■□□□ 1
HDAC8-215ENST00000444609 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
HDAC8-215ENST00000444609 WDR62O43379 1518 aa21.24■□□□□ 0.99
HDAC8-215ENST00000444609 RIMBP3CA6NJZ7 1639 aa21.23■□□□□ 0.99
HDAC8-215ENST00000444609 RIMBP3BA6NNM3 1639 aa21.23■□□□□ 0.99
HDAC8-215ENST00000444609 RIMBP3Q9UFD9 1639 aa21.23■□□□□ 0.99
HDAC8-215ENST00000444609 TRHP20396 242 aaPredicted RBP21.23■□□□□ 0.99
HDAC8-215ENST00000444609 SMARCA4P51532 1647 aa21.17■□□□□ 0.98
HDAC8-215ENST00000444609 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
HDAC8-215ENST00000444609 CYB5RLQ6IPT4 315 aa21.12■□□□□ 0.97
HDAC8-215ENST00000444609 ARHGEF11O15085 1522 aa21.1■□□□□ 0.97
HDAC8-215ENST00000444609 PEG3Q9GZU2 1588 aa21.02■□□□□ 0.95
HDAC8-215ENST00000444609 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
HDAC8-215ENST00000444609 FANCD2Q9BXW9 1451 aa20.84■□□□□ 0.93
HDAC8-215ENST00000444609 ARAP1Q96P48 1450 aa20.83■□□□□ 0.93
HDAC8-215ENST00000444609 ILDR1Q86SU0 546 aaPredicted RBP20.77■□□□□ 0.92
HDAC8-215ENST00000444609 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
HDAC8-215ENST00000444609 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
HDAC8-215ENST00000444609 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
HDAC8-215ENST00000444609 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.89
HDAC8-215ENST00000444609 CFTRP13569 1480 aa20.62■□□□□ 0.89
HDAC8-215ENST00000444609 IFT140Q96RY7 1462 aa20.6■□□□□ 0.89
HDAC8-215ENST00000444609 FBLN2P98095 1184 aa20.48■□□□□ 0.87
HDAC8-215ENST00000444609 CHD1O14646 1710 aa20.4■□□□□ 0.86
HDAC8-215ENST00000444609 EIF4G3O43432 1585 aaKnown RBP20.4■□□□□ 0.86
HDAC8-215ENST00000444609 AQRO60306 1485 aaKnown RBP eCLIP20.37■□□□□ 0.85
HDAC8-215ENST00000444609 WIZO95785 1651 aa20.35■□□□□ 0.85
HDAC8-215ENST00000444609 TOPBP1Q92547 1522 aa20.3■□□□□ 0.84
HDAC8-215ENST00000444609 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.83
HDAC8-215ENST00000444609 KDM4FA0A1W2PPD8 638 aa20.23■□□□□ 0.83
HDAC8-215ENST00000444609 ABCC8Q09428 1581 aa20.2■□□□□ 0.82
HDAC8-215ENST00000444609 GAPVD1Q14C86 1478 aa20.19■□□□□ 0.82
HDAC8-215ENST00000444609 TARBP1Q13395 1621 aaKnown RBP20.17■□□□□ 0.82
HDAC8-215ENST00000444609 CHMP7Q8WUX9 453 aaPredicted RBP20.16■□□□□ 0.82
HDAC8-215ENST00000444609 SYNJ1O43426 1573 aa20.12■□□□□ 0.81
HDAC8-215ENST00000444609 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.81
HDAC8-215ENST00000444609 SNAPC4Q5SXM2 1469 aa20.08■□□□□ 0.81
HDAC8-215ENST00000444609 DNMBPQ6XZF7 1577 aa20.08■□□□□ 0.8
HDAC8-215ENST00000444609 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
HDAC8-215ENST00000444609 TOP2AP11388 1531 aaKnown RBP20.04■□□□□ 0.8
HDAC8-215ENST00000444609 POLA1P09884 1462 aaPredicted RBP20.03■□□□□ 0.8
HDAC8-215ENST00000444609 RAD54L2Q9Y4B4 1467 aa19.99■□□□□ 0.79
HDAC8-215ENST00000444609 MAGI1Q96QZ7 1491 aaPredicted RBP19.98■□□□□ 0.79
HDAC8-215ENST00000444609 SOGA1O94964 1423 aa19.96■□□□□ 0.79
HDAC8-215ENST00000444609 SYNJ2O15056 1496 aa19.95■□□□□ 0.78
HDAC8-215ENST00000444609 CCDC88BA6NC98 1476 aa19.9■□□□□ 0.78
HDAC8-215ENST00000444609 GRIN2BQ13224 1484 aa19.89■□□□□ 0.77
HDAC8-215ENST00000444609 KIF13AQ9H1H9 1805 aa19.88■□□□□ 0.77
HDAC8-215ENST00000444609 FAM69CQ0P6D2 419 aa19.88■□□□□ 0.77
HDAC8-215ENST00000444609 ERCC6L2Q5T890 1561 aa19.87■□□□□ 0.77
HDAC8-215ENST00000444609 FBXO41Q8TF61 875 aa19.86■□□□□ 0.77
HDAC8-215ENST00000444609 WDR97A6NE52 1622 aa19.86■□□□□ 0.77
HDAC8-215ENST00000444609 ABCC10Q5T3U5 1492 aa19.79■□□□□ 0.76
HDAC8-215ENST00000444609 HECW2Q9P2P5 1572 aa19.74■□□□□ 0.75
HDAC8-215ENST00000444609 KDM6BO15054 1643 aa19.74■□□□□ 0.75
HDAC8-215ENST00000444609 FGD5Q6ZNL6 1462 aa19.73■□□□□ 0.75
HDAC8-215ENST00000444609 CEP170Q5SW79 1584 aa19.71■□□□□ 0.75
HDAC8-215ENST00000444609 ADGRL1O94910 1474 aa19.67■□□□□ 0.74
HDAC8-215ENST00000444609 NPM1P06748 294 aaKnown RBP eCLIP19.66■□□□□ 0.74
HDAC8-215ENST00000444609 LMTK3Q96Q04 1460 aa19.63■□□□□ 0.73
HDAC8-215ENST00000444609 DIP2BQ9P265 1576 aa19.62■□□□□ 0.73
HDAC8-215ENST00000444609 NUP160Q12769 1436 aa19.62■□□□□ 0.73
HDAC8-215ENST00000444609 GRIN2AQ12879 1464 aa19.61■□□□□ 0.73
HDAC8-215ENST00000444609 MAPKBP1O60336 1514 aa19.61■□□□□ 0.73
HDAC8-215ENST00000444609 SHROOM2Q13796 1616 aa19.58■□□□□ 0.72
HDAC8-215ENST00000444609 SOCS7O14512 581 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms