RNA–Protein interactions for RNA: ENST00000444107.1

GAPDHP20-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 20, humanhuman

BASIC

Gene GAPDHP20, Length 1,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP20-201ENST00000444107 NISCHQ9Y2I1 1504 aa16.21■□□□□ 0.19
GAPDHP20-201ENST00000444107 AEBP2Q6ZN18 517 aaPredicted RBP14.83□□□□□ -0.04
GAPDHP20-201ENST00000444107 CCDC180Q9P1Z9 1646 aa14.42□□□□□ -0.1
GAPDHP20-201ENST00000444107 ABCC9O60706 1549 aa13.98□□□□□ -0.17
GAPDHP20-201ENST00000444107 CHIC1Q5VXU3 224 aa13.83□□□□□ -0.2
GAPDHP20-201ENST00000444107 NACADO15069 1562 aa13.56□□□□□ -0.24
GAPDHP20-201ENST00000444107 RB1CC1Q8TDY2 1594 aa13.55□□□□□ -0.24
GAPDHP20-201ENST00000444107 MYO15BQ96JP2 1530 aa13.53□□□□□ -0.24
GAPDHP20-201ENST00000444107 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
GAPDHP20-201ENST00000444107 ZCCHC6Q5VYS8 1495 aaKnown RBP13.5□□□□□ -0.25
GAPDHP20-201ENST00000444107 DCAF1Q9Y4B6 1507 aa13.47□□□□□ -0.25
GAPDHP20-201ENST00000444107 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
GAPDHP20-201ENST00000444107 SCRIBQ14160 1630 aa13.09□□□□□ -0.31
GAPDHP20-201ENST00000444107 BICRAQ9NZM4 1560 aa13.07□□□□□ -0.32
GAPDHP20-201ENST00000444107 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
GAPDHP20-201ENST00000444107 SHROOM4Q9ULL8 1493 aa13.05□□□□□ -0.32
GAPDHP20-201ENST00000444107 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
GAPDHP20-201ENST00000444107 EIF4G1Q04637 1599 aaKnown RBP12.74□□□□□ -0.37
GAPDHP20-201ENST00000444107 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
GAPDHP20-201ENST00000444107 SENP3Q9H4L4 574 aaPredicted RBP12.67□□□□□ -0.38
GAPDHP20-201ENST00000444107 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
GAPDHP20-201ENST00000444107 BAZ1AQ9NRL2 1556 aaPredicted RBP12.59□□□□□ -0.39
GAPDHP20-201ENST00000444107 SMARCA4P51532 1647 aa12.56□□□□□ -0.4
GAPDHP20-201ENST00000444107 SMARCA2P51531 1590 aa12.52□□□□□ -0.41
GAPDHP20-201ENST00000444107 NCAPD3P42695 1498 aa12.49□□□□□ -0.41
GAPDHP20-201ENST00000444107 ATAD2BQ9ULI0 1458 aa12.48□□□□□ -0.41
GAPDHP20-201ENST00000444107 PHF23Q9BUL5 403 aaPredicted RBP12.47□□□□□ -0.41
GAPDHP20-201ENST00000444107 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
GAPDHP20-201ENST00000444107 MROH2BQ7Z745 1585 aa12.46□□□□□ -0.42
GAPDHP20-201ENST00000444107 HMGXB3Q12766 1538 aa12.43□□□□□ -0.42
GAPDHP20-201ENST00000444107 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.43
GAPDHP20-201ENST00000444107 RSF1Q96T23 1441 aaPredicted RBP12.36□□□□□ -0.43
GAPDHP20-201ENST00000444107 WIZO95785 1651 aa12.32□□□□□ -0.44
GAPDHP20-201ENST00000444107 TOP2AP11388 1531 aaKnown RBP12.23□□□□□ -0.45
GAPDHP20-201ENST00000444107 LAMC3Q9Y6N6 1575 aa12.17□□□□□ -0.46
GAPDHP20-201ENST00000444107 CADPSQ9ULU8 1353 aa12.13□□□□□ -0.47
GAPDHP20-201ENST00000444107 NESP48681 1621 aa12.1□□□□□ -0.47
GAPDHP20-201ENST00000444107 PDS5BQ9NTI5 1447 aa12.1□□□□□ -0.47
GAPDHP20-201ENST00000444107 ERCC6Q03468 1493 aa12.09□□□□□ -0.47
GAPDHP20-201ENST00000444107 SUPT5HO00267 1087 aaKnown RBP12.08□□□□□ -0.48
GAPDHP20-201ENST00000444107 CCDC88BA6NC98 1476 aa12.08□□□□□ -0.48
GAPDHP20-201ENST00000444107 CFTRP13569 1480 aa12.06□□□□□ -0.48
GAPDHP20-201ENST00000444107 PRDM2Q13029 1718 aa11.99□□□□□ -0.49
GAPDHP20-201ENST00000444107 KIF21AQ7Z4S6 1674 aa11.98□□□□□ -0.49
GAPDHP20-201ENST00000444107 CUX2O14529 1486 aa11.97□□□□□ -0.49
GAPDHP20-201ENST00000444107 FANCD2Q9BXW9 1451 aa11.97□□□□□ -0.49
GAPDHP20-201ENST00000444107 CEP164Q9UPV0 1460 aa11.96□□□□□ -0.49
GAPDHP20-201ENST00000444107 THOC2Q8NI27 1593 aaKnown RBP11.93□□□□□ -0.5
GAPDHP20-201ENST00000444107 MRC2Q9UBG0 1479 aa11.93□□□□□ -0.5
GAPDHP20-201ENST00000444107 WDR62O43379 1518 aa11.88□□□□□ -0.51
GAPDHP20-201ENST00000444107 ABCC8Q09428 1581 aa11.87□□□□□ -0.51
GAPDHP20-201ENST00000444107 FOXD1Q16676 465 aa11.86□□□□□ -0.51
GAPDHP20-201ENST00000444107 URB2Q14146 1524 aaKnown RBP11.81□□□□□ -0.52
GAPDHP20-201ENST00000444107 DNMBPQ6XZF7 1577 aa11.79□□□□□ -0.52
GAPDHP20-201ENST00000444107 TOPBP1Q92547 1522 aa11.78□□□□□ -0.52
GAPDHP20-201ENST00000444107 IFT140Q96RY7 1462 aa11.72□□□□□ -0.53
GAPDHP20-201ENST00000444107 CUX1P39880 1505 aa11.69□□□□□ -0.54
GAPDHP20-201ENST00000444107 POLA1P09884 1462 aaPredicted RBP11.68□□□□□ -0.54
GAPDHP20-201ENST00000444107 WRNQ14191 1432 aaPredicted RBP eCLIP11.67□□□□□ -0.54
GAPDHP20-201ENST00000444107 SOGA1O94964 1423 aa11.66□□□□□ -0.54
GAPDHP20-201ENST00000444107 FGD5Q6ZNL6 1462 aa11.65□□□□□ -0.54
GAPDHP20-201ENST00000444107 TOP2BQ02880 1626 aa11.64□□□□□ -0.55
GAPDHP20-201ENST00000444107 TARBP1Q13395 1621 aaKnown RBP11.64□□□□□ -0.55
GAPDHP20-201ENST00000444107 WDR97A6NE52 1622 aa11.64□□□□□ -0.55
GAPDHP20-201ENST00000444107 BIVM-ERCC5R4GMW8 1640 aa11.64□□□□□ -0.55
GAPDHP20-201ENST00000444107 RAD54L2Q9Y4B4 1467 aa11.6□□□□□ -0.55
GAPDHP20-201ENST00000444107 ZNF608Q9ULD9 1512 aaPredicted RBP11.6□□□□□ -0.55
GAPDHP20-201ENST00000444107 SYNJ1O43426 1573 aa11.59□□□□□ -0.55
GAPDHP20-201ENST00000444107 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.56
GAPDHP20-201ENST00000444107 ABCA10Q8WWZ4 1543 aa11.57□□□□□ -0.56
GAPDHP20-201ENST00000444107 AQRO60306 1485 aaKnown RBP eCLIP11.56□□□□□ -0.56
GAPDHP20-201ENST00000444107 TDRD9Q8NDG6 1382 aaKnown RBP11.55□□□□□ -0.56
GAPDHP20-201ENST00000444107 DNAJC5Q9H3Z4 198 aa11.53□□□□□ -0.56
GAPDHP20-201ENST00000444107 GRIN2BQ13224 1484 aa11.52□□□□□ -0.56
GAPDHP20-201ENST00000444107 GAPVD1Q14C86 1478 aa11.52□□□□□ -0.56
GAPDHP20-201ENST00000444107 OSCARQ8IYS5 282 aa11.51□□□□□ -0.57
GAPDHP20-201ENST00000444107 MAGI1Q96QZ7 1491 aaPredicted RBP11.5□□□□□ -0.57
GAPDHP20-201ENST00000444107 ABCA5Q8WWZ7 1642 aa11.49□□□□□ -0.57
GAPDHP20-201ENST00000444107 PBRM1Q86U86 1689 aa11.47□□□□□ -0.57
GAPDHP20-201ENST00000444107 TRIM41Q8WV44 630 aa11.46□□□□□ -0.57
GAPDHP20-201ENST00000444107 ERICH3Q5RHP9 1530 aa11.45□□□□□ -0.58
GAPDHP20-201ENST00000444107 SNAPC4Q5SXM2 1469 aa11.45□□□□□ -0.58
GAPDHP20-201ENST00000444107 CHMP7Q8WUX9 453 aaPredicted RBP11.45□□□□□ -0.58
GAPDHP20-201ENST00000444107 KIF27Q86VH2 1401 aa11.44□□□□□ -0.58
GAPDHP20-201ENST00000444107 FBLN2P98095 1184 aa11.44□□□□□ -0.58
GAPDHP20-201ENST00000444107 POTEDQ86YR6 584 aa11.44□□□□□ -0.58
GAPDHP20-201ENST00000444107 SYNJ2O15056 1496 aa11.44□□□□□ -0.58
GAPDHP20-201ENST00000444107 CHD1O14646 1710 aa11.42□□□□□ -0.58
GAPDHP20-201ENST00000444107 FHAD1B1AJZ9 1412 aa11.41□□□□□ -0.58
GAPDHP20-201ENST00000444107 ADAMTS12P58397 1594 aa11.37□□□□□ -0.59
GAPDHP20-201ENST00000444107 IGF1RP08069 1367 aa11.37□□□□□ -0.59
GAPDHP20-201ENST00000444107 CUL7Q14999 1698 aa11.36□□□□□ -0.59
GAPDHP20-201ENST00000444107 GRIN2AQ12879 1464 aa11.35□□□□□ -0.59
GAPDHP20-201ENST00000444107 CARMIL1Q5VZK9 1371 aa11.31□□□□□ -0.6
GAPDHP20-201ENST00000444107 CLASP1Q7Z460 1538 aa11.3□□□□□ -0.6
GAPDHP20-201ENST00000444107 NUP160Q12769 1436 aa11.3□□□□□ -0.6
GAPDHP20-201ENST00000444107 EEA1Q15075 1411 aa11.3□□□□□ -0.6
GAPDHP20-201ENST00000444107 RUSC2Q8N2Y8 1516 aa11.27□□□□□ -0.61
GAPDHP20-201ENST00000444107 CEP170Q5SW79 1584 aa11.26□□□□□ -0.61
GAPDHP20-201ENST00000444107 RAPGEF2Q9Y4G8 1499 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms