RNA–Protein interactions for RNA: ENST00000442522.6

CCDC66-208, Transcript of coiled-coil domain containing 66, humanhuman

TSL 5

Gene CCDC66, Length 2,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-208ENST00000442522 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
CCDC66-208ENST00000442522 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
CCDC66-208ENST00000442522 ABCC9O60706 1549 aa19.22■□□□□ 0.67
CCDC66-208ENST00000442522 ZCCHC6Q5VYS8 1495 aaKnown RBP18.96■□□□□ 0.63
CCDC66-208ENST00000442522 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
CCDC66-208ENST00000442522 DCAF1Q9Y4B6 1507 aa18.79■□□□□ 0.6
CCDC66-208ENST00000442522 NACADO15069 1562 aa18.74■□□□□ 0.59
CCDC66-208ENST00000442522 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
CCDC66-208ENST00000442522 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
CCDC66-208ENST00000442522 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
CCDC66-208ENST00000442522 UNC13AQ9UPW8 1703 aa18.21■□□□□ 0.51
CCDC66-208ENST00000442522 SHROOM4Q9ULL8 1493 aa18.14■□□□□ 0.49
CCDC66-208ENST00000442522 BICRAQ9NZM4 1560 aa18.03■□□□□ 0.48
CCDC66-208ENST00000442522 PABPN1Q86U42 306 aaKnown RBP eCLIP18.02■□□□□ 0.48
CCDC66-208ENST00000442522 CECR2Q9BXF3 1484 aa17.58■□□□□ 0.41
CCDC66-208ENST00000442522 BAZ1AQ9NRL2 1556 aaPredicted RBP17.58■□□□□ 0.41
CCDC66-208ENST00000442522 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
CCDC66-208ENST00000442522 SMARCA4P51532 1647 aa17.52■□□□□ 0.4
CCDC66-208ENST00000442522 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.39
CCDC66-208ENST00000442522 CC2D2AQ9P2K1 1620 aa17.41■□□□□ 0.38
CCDC66-208ENST00000442522 RSF1Q96T23 1441 aaPredicted RBP17.4■□□□□ 0.38
CCDC66-208ENST00000442522 SMARCA2P51531 1590 aa17.37■□□□□ 0.37
CCDC66-208ENST00000442522 PEG3Q9GZU2 1588 aa17.34■□□□□ 0.37
CCDC66-208ENST00000442522 ATAD2BQ9ULI0 1458 aa17.32■□□□□ 0.36
CCDC66-208ENST00000442522 WIZO95785 1651 aa17.3■□□□□ 0.36
CCDC66-208ENST00000442522 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.36
CCDC66-208ENST00000442522 NCAPD3P42695 1498 aa17.26■□□□□ 0.35
CCDC66-208ENST00000442522 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
CCDC66-208ENST00000442522 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
CCDC66-208ENST00000442522 HMGXB3Q12766 1538 aa17.23■□□□□ 0.35
CCDC66-208ENST00000442522 TOP2AP11388 1531 aaKnown RBP17.16■□□□□ 0.34
CCDC66-208ENST00000442522 CCDC88BA6NC98 1476 aa16.93■□□□□ 0.3
CCDC66-208ENST00000442522 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
CCDC66-208ENST00000442522 LAMC3Q9Y6N6 1575 aa16.78■□□□□ 0.28
CCDC66-208ENST00000442522 CFTRP13569 1480 aa16.76■□□□□ 0.27
CCDC66-208ENST00000442522 NESP48681 1621 aa16.71■□□□□ 0.27
CCDC66-208ENST00000442522 PRDM2Q13029 1718 aa16.69■□□□□ 0.26
CCDC66-208ENST00000442522 PDS5BQ9NTI5 1447 aa16.68■□□□□ 0.26
CCDC66-208ENST00000442522 FANCD2Q9BXW9 1451 aa16.61■□□□□ 0.25
CCDC66-208ENST00000442522 ERCC6Q03468 1493 aa16.6■□□□□ 0.25
CCDC66-208ENST00000442522 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
CCDC66-208ENST00000442522 KIF21AQ7Z4S6 1674 aa16.55■□□□□ 0.24
CCDC66-208ENST00000442522 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.23
CCDC66-208ENST00000442522 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
CCDC66-208ENST00000442522 WRNQ14191 1432 aaPredicted RBP eCLIP16.43■□□□□ 0.22
CCDC66-208ENST00000442522 DNMBPQ6XZF7 1577 aa16.4■□□□□ 0.22
CCDC66-208ENST00000442522 THOC2Q8NI27 1593 aaKnown RBP16.4■□□□□ 0.22
CCDC66-208ENST00000442522 URB2Q14146 1524 aaKnown RBP16.38■□□□□ 0.21
CCDC66-208ENST00000442522 WDR62O43379 1518 aa16.38■□□□□ 0.21
CCDC66-208ENST00000442522 TOPBP1Q92547 1522 aa16.37■□□□□ 0.21
CCDC66-208ENST00000442522 CUX1P39880 1505 aa16.36■□□□□ 0.21
CCDC66-208ENST00000442522 TOP2BQ02880 1626 aa16.35■□□□□ 0.21
CCDC66-208ENST00000442522 SYNJ1O43426 1573 aa16.33■□□□□ 0.21
CCDC66-208ENST00000442522 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.21
CCDC66-208ENST00000442522 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
CCDC66-208ENST00000442522 CHIC1Q5VXU3 224 aa16.3■□□□□ 0.2
CCDC66-208ENST00000442522 CUX2O14529 1486 aa16.27■□□□□ 0.2
CCDC66-208ENST00000442522 FGD5Q6ZNL6 1462 aa16.27■□□□□ 0.2
CCDC66-208ENST00000442522 POLA1P09884 1462 aaPredicted RBP16.25■□□□□ 0.19
CCDC66-208ENST00000442522 SOGA1O94964 1423 aa16.21■□□□□ 0.19
CCDC66-208ENST00000442522 IFT140Q96RY7 1462 aa16.2■□□□□ 0.18
CCDC66-208ENST00000442522 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
CCDC66-208ENST00000442522 TARBP1Q13395 1621 aaKnown RBP16.15■□□□□ 0.18
CCDC66-208ENST00000442522 ABCA10Q8WWZ4 1543 aa16.13■□□□□ 0.17
CCDC66-208ENST00000442522 WDR97A6NE52 1622 aa16.1■□□□□ 0.17
CCDC66-208ENST00000442522 KIF27Q86VH2 1401 aa16.08■□□□□ 0.16
CCDC66-208ENST00000442522 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
CCDC66-208ENST00000442522 ZNF608Q9ULD9 1512 aaPredicted RBP16.05■□□□□ 0.16
CCDC66-208ENST00000442522 GAPVD1Q14C86 1478 aa16.04■□□□□ 0.16
CCDC66-208ENST00000442522 EIF4G3O43432 1585 aaKnown RBP16.04■□□□□ 0.16
CCDC66-208ENST00000442522 ABCA5Q8WWZ7 1642 aa16.03■□□□□ 0.16
CCDC66-208ENST00000442522 EEA1Q15075 1411 aa16.03■□□□□ 0.16
CCDC66-208ENST00000442522 AQRO60306 1485 aaKnown RBP eCLIP16.02■□□□□ 0.161e-19■■■■■ 74.1
CCDC66-208ENST00000442522 GRIN2BQ13224 1484 aa15.99■□□□□ 0.15
CCDC66-208ENST00000442522 PBRM1Q86U86 1689 aa15.97■□□□□ 0.15
CCDC66-208ENST00000442522 ERICH3Q5RHP9 1530 aa15.97■□□□□ 0.15
CCDC66-208ENST00000442522 RUSC2Q8N2Y8 1516 aa15.96■□□□□ 0.15
CCDC66-208ENST00000442522 FAM9AQ8IZU1 332 aaPredicted RBP15.94■□□□□ 0.14
CCDC66-208ENST00000442522 CSRNP3Q8WYN3 585 aa15.92■□□□□ 0.14
CCDC66-208ENST00000442522 IGF1RP08069 1367 aa15.92■□□□□ 0.14
CCDC66-208ENST00000442522 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
CCDC66-208ENST00000442522 CUL7Q14999 1698 aa15.91■□□□□ 0.14
CCDC66-208ENST00000442522 SNAPC4Q5SXM2 1469 aa15.9■□□□□ 0.14
CCDC66-208ENST00000442522 FHAD1B1AJZ9 1412 aa15.87■□□□□ 0.13
CCDC66-208ENST00000442522 CARMIL1Q5VZK9 1371 aa15.86■□□□□ 0.13
CCDC66-208ENST00000442522 ADAMTS12P58397 1594 aa15.86■□□□□ 0.13
CCDC66-208ENST00000442522 SYNJ2O15056 1496 aa15.84■□□□□ 0.13
CCDC66-208ENST00000442522 CHMP7Q8WUX9 453 aaPredicted RBP15.83■□□□□ 0.13
CCDC66-208ENST00000442522 FBLN2P98095 1184 aa15.82■□□□□ 0.12
CCDC66-208ENST00000442522 RAPGEF2Q9Y4G8 1499 aa15.82■□□□□ 0.12
CCDC66-208ENST00000442522 PRXQ9BXM0 1461 aa15.81■□□□□ 0.12
CCDC66-208ENST00000442522 KIF21BO75037 1637 aa15.8■□□□□ 0.12
CCDC66-208ENST00000442522 GRIN2AQ12879 1464 aa15.77■□□□□ 0.11
CCDC66-208ENST00000442522 CHD1O14646 1710 aa15.76■□□□□ 0.11
CCDC66-208ENST00000442522 GOLGA3Q08378 1498 aa15.75■□□□□ 0.11
CCDC66-208ENST00000442522 EHMT2Q96KQ7 1210 aa15.71■□□□□ 0.11
CCDC66-208ENST00000442522 UBTFP17480 764 aaKnown RBP15.7■□□□□ 0.1
CCDC66-208ENST00000442522 OSCARQ8IYS5 282 aa15.68■□□□□ 0.1
CCDC66-208ENST00000442522 NUP160Q12769 1436 aa15.67■□□□□ 0.1
CCDC66-208ENST00000442522 CEP170Q5SW79 1584 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms