RNA–Protein interactions for RNA: ENST00000441817.2

SNX25P1-201, Transcript of sorting nexin 25 pseudogene 1, humanhuman

BASIC

Gene SNX25P1, Length 834 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25P1-201ENST00000441817 NISCHQ9Y2I1 1504 aa23.04■■□□□ 1.28
SNX25P1-201ENST00000441817 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
SNX25P1-201ENST00000441817 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
SNX25P1-201ENST00000441817 ABCC9O60706 1549 aa19.21■□□□□ 0.67
SNX25P1-201ENST00000441817 DCAF1Q9Y4B6 1507 aa19.13■□□□□ 0.65
SNX25P1-201ENST00000441817 MYO15BQ96JP2 1530 aa19.01■□□□□ 0.63
SNX25P1-201ENST00000441817 NACADO15069 1562 aa18.86■□□□□ 0.61
SNX25P1-201ENST00000441817 DCAF8L2P0C7V8 631 aa18.8■□□□□ 0.6
SNX25P1-201ENST00000441817 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
SNX25P1-201ENST00000441817 SCRIBQ14160 1630 aa18.44■□□□□ 0.54
SNX25P1-201ENST00000441817 SHROOM4Q9ULL8 1493 aa18.41■□□□□ 0.54
SNX25P1-201ENST00000441817 UNC13AQ9UPW8 1703 aa18.34■□□□□ 0.53
SNX25P1-201ENST00000441817 BICRAQ9NZM4 1560 aa18.26■□□□□ 0.51
SNX25P1-201ENST00000441817 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
SNX25P1-201ENST00000441817 CECR2Q9BXF3 1484 aa17.91■□□□□ 0.46
SNX25P1-201ENST00000441817 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
SNX25P1-201ENST00000441817 MROH2BQ7Z745 1585 aa17.78■□□□□ 0.44
SNX25P1-201ENST00000441817 BAZ1AQ9NRL2 1556 aaPredicted RBP17.77■□□□□ 0.44
SNX25P1-201ENST00000441817 SMARCA4P51532 1647 aa17.74■□□□□ 0.43
SNX25P1-201ENST00000441817 EIF4G1Q04637 1599 aaKnown RBP17.66■□□□□ 0.42
SNX25P1-201ENST00000441817 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
SNX25P1-201ENST00000441817 WIZO95785 1651 aa17.56■□□□□ 0.4
SNX25P1-201ENST00000441817 SUPT5HO00267 1087 aaKnown RBP17.56■□□□□ 0.4
SNX25P1-201ENST00000441817 ATAD2BQ9ULI0 1458 aa17.53■□□□□ 0.4
SNX25P1-201ENST00000441817 SMARCA2P51531 1590 aa17.48■□□□□ 0.39
SNX25P1-201ENST00000441817 NCAPD3P42695 1498 aa17.46■□□□□ 0.39
SNX25P1-201ENST00000441817 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
SNX25P1-201ENST00000441817 TOP2AP11388 1531 aaKnown RBP17.43■□□□□ 0.38
SNX25P1-201ENST00000441817 HMGXB3Q12766 1538 aa17.4■□□□□ 0.38
SNX25P1-201ENST00000441817 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
SNX25P1-201ENST00000441817 DNAJC5BQ9UF47 199 aa17.26■□□□□ 0.35
SNX25P1-201ENST00000441817 CCDC88BA6NC98 1476 aa17.23■□□□□ 0.35
SNX25P1-201ENST00000441817 CFTRP13569 1480 aa16.99■□□□□ 0.31
SNX25P1-201ENST00000441817 CADPSQ9ULU8 1353 aa16.93■□□□□ 0.3
SNX25P1-201ENST00000441817 NESP48681 1621 aa16.85■□□□□ 0.29
SNX25P1-201ENST00000441817 LAMC3Q9Y6N6 1575 aa16.84■□□□□ 0.29
SNX25P1-201ENST00000441817 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
SNX25P1-201ENST00000441817 PRDM2Q13029 1718 aa16.8■□□□□ 0.28
SNX25P1-201ENST00000441817 ABCC8Q09428 1581 aa16.73■□□□□ 0.27
SNX25P1-201ENST00000441817 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
SNX25P1-201ENST00000441817 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.26
SNX25P1-201ENST00000441817 PDS5BQ9NTI5 1447 aa16.67■□□□□ 0.26
SNX25P1-201ENST00000441817 SYNJ1O43426 1573 aa16.65■□□□□ 0.26
SNX25P1-201ENST00000441817 CUX1P39880 1505 aa16.64■□□□□ 0.25
SNX25P1-201ENST00000441817 TOP2BQ02880 1626 aa16.62■□□□□ 0.25
SNX25P1-201ENST00000441817 CEP164Q9UPV0 1460 aa16.61■□□□□ 0.25
SNX25P1-201ENST00000441817 KIF21AQ7Z4S6 1674 aa16.61■□□□□ 0.25
SNX25P1-201ENST00000441817 BIVM-ERCC5R4GMW8 1640 aa16.6■□□□□ 0.25
SNX25P1-201ENST00000441817 URB2Q14146 1524 aaKnown RBP16.57■□□□□ 0.24
SNX25P1-201ENST00000441817 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
SNX25P1-201ENST00000441817 DNMBPQ6XZF7 1577 aa16.55■□□□□ 0.24
SNX25P1-201ENST00000441817 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
SNX25P1-201ENST00000441817 MRC2Q9UBG0 1479 aa16.51■□□□□ 0.23
SNX25P1-201ENST00000441817 THOC2Q8NI27 1593 aaKnown RBP16.48■□□□□ 0.23
SNX25P1-201ENST00000441817 WDR62O43379 1518 aa16.48■□□□□ 0.23
SNX25P1-201ENST00000441817 FGD5Q6ZNL6 1462 aa16.46■□□□□ 0.23
SNX25P1-201ENST00000441817 POLA1P09884 1462 aaPredicted RBP16.44■□□□□ 0.22
SNX25P1-201ENST00000441817 ERCC6Q03468 1493 aa16.43■□□□□ 0.22
SNX25P1-201ENST00000441817 SOGA1O94964 1423 aa16.4■□□□□ 0.22
SNX25P1-201ENST00000441817 CUX2O14529 1486 aa16.39■□□□□ 0.21
SNX25P1-201ENST00000441817 RUSC2Q8N2Y8 1516 aa16.36■□□□□ 0.21
SNX25P1-201ENST00000441817 ABCA10Q8WWZ4 1543 aa16.35■□□□□ 0.21
SNX25P1-201ENST00000441817 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
SNX25P1-201ENST00000441817 TARBP1Q13395 1621 aaKnown RBP16.34■□□□□ 0.21
SNX25P1-201ENST00000441817 WDR97A6NE52 1622 aa16.33■□□□□ 0.2
SNX25P1-201ENST00000441817 EEA1Q15075 1411 aa16.32■□□□□ 0.2
SNX25P1-201ENST00000441817 IFT140Q96RY7 1462 aa16.27■□□□□ 0.19
SNX25P1-201ENST00000441817 KIF27Q86VH2 1401 aa16.26■□□□□ 0.19
SNX25P1-201ENST00000441817 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
SNX25P1-201ENST00000441817 IGF1RP08069 1367 aa16.21■□□□□ 0.19
SNX25P1-201ENST00000441817 CSRNP3Q8WYN3 585 aa16.2■□□□□ 0.18
SNX25P1-201ENST00000441817 ZNF608Q9ULD9 1512 aaPredicted RBP16.19■□□□□ 0.18
SNX25P1-201ENST00000441817 PRXQ9BXM0 1461 aa16.19■□□□□ 0.18
SNX25P1-201ENST00000441817 TDRD9Q8NDG6 1382 aaKnown RBP16.19■□□□□ 0.18
SNX25P1-201ENST00000441817 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
SNX25P1-201ENST00000441817 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
SNX25P1-201ENST00000441817 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.18
SNX25P1-201ENST00000441817 KIF21BO75037 1637 aa16.14■□□□□ 0.17
SNX25P1-201ENST00000441817 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNX25P1-201ENST00000441817 EIF4G3O43432 1585 aaKnown RBP16.12■□□□□ 0.17
SNX25P1-201ENST00000441817 LOC105371045A0A1W2PR82 267 aa16.1■□□□□ 0.17
SNX25P1-201ENST00000441817 GRIN2BQ13224 1484 aa16.09■□□□□ 0.17
SNX25P1-201ENST00000441817 RAPGEF2Q9Y4G8 1499 aa16.08■□□□□ 0.16
SNX25P1-201ENST00000441817 PBRM1Q86U86 1689 aa16.06■□□□□ 0.16
SNX25P1-201ENST00000441817 CARMIL1Q5VZK9 1371 aa16.06■□□□□ 0.16
SNX25P1-201ENST00000441817 CUL7Q14999 1698 aa16.05■□□□□ 0.16
SNX25P1-201ENST00000441817 GOLGA3Q08378 1498 aa16.05■□□□□ 0.16
SNX25P1-201ENST00000441817 ADAMTS12P58397 1594 aa16.03■□□□□ 0.16
SNX25P1-201ENST00000441817 FHAD1B1AJZ9 1412 aa16■□□□□ 0.15
SNX25P1-201ENST00000441817 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
SNX25P1-201ENST00000441817 MAGI1Q96QZ7 1491 aaPredicted RBP15.99■□□□□ 0.15
SNX25P1-201ENST00000441817 TNIKQ9UKE5 1360 aa15.99■□□□□ 0.15
SNX25P1-201ENST00000441817 SYNJ2O15056 1496 aa15.93■□□□□ 0.14
SNX25P1-201ENST00000441817 GRIN2AQ12879 1464 aa15.9■□□□□ 0.14
SNX25P1-201ENST00000441817 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
SNX25P1-201ENST00000441817 NUP160Q12769 1436 aa15.85■□□□□ 0.13
SNX25P1-201ENST00000441817 CEP162Q5TB80 1403 aa15.85■□□□□ 0.13
SNX25P1-201ENST00000441817 UBTFP17480 764 aaKnown RBP15.85■□□□□ 0.13
SNX25P1-201ENST00000441817 CEP170Q5SW79 1584 aa15.82■□□□□ 0.12
SNX25P1-201ENST00000441817 CTTNBP2Q8WZ74 1663 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms