RNA–Protein interactions for RNA: ENST00000441065.2

RFPL4B-201, Transcript of ret finger protein like 4B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFPL4B, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4B-201ENST00000441065 NISCHQ9Y2I1 1504 aa18.92■□□□□ 0.62
RFPL4B-201ENST00000441065 ABCC9O60706 1549 aa17.63■□□□□ 0.41
RFPL4B-201ENST00000441065 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
RFPL4B-201ENST00000441065 DNAJC5BQ9UF47 199 aa16.99■□□□□ 0.31
RFPL4B-201ENST00000441065 RB1CC1Q8TDY2 1594 aa16.69■□□□□ 0.26
RFPL4B-201ENST00000441065 NACADO15069 1562 aa16.48■□□□□ 0.23
RFPL4B-201ENST00000441065 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
RFPL4B-201ENST00000441065 DNAJC5Q9H3Z4 198 aa16.16■□□□□ 0.18
RFPL4B-201ENST00000441065 MYO15BQ96JP2 1530 aa16.15■□□□□ 0.18
RFPL4B-201ENST00000441065 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
RFPL4B-201ENST00000441065 UNC13AQ9UPW8 1703 aa16.12■□□□□ 0.17
RFPL4B-201ENST00000441065 BICRAQ9NZM4 1560 aa16.11■□□□□ 0.17
RFPL4B-201ENST00000441065 SHROOM4Q9ULL8 1493 aa16.09■□□□□ 0.17
RFPL4B-201ENST00000441065 CECR2Q9BXF3 1484 aa16.02■□□□□ 0.15
RFPL4B-201ENST00000441065 CC2D2AQ9P2K1 1620 aa15.93■□□□□ 0.14
RFPL4B-201ENST00000441065 EIF4G1Q04637 1599 aaKnown RBP15.8■□□□□ 0.12
RFPL4B-201ENST00000441065 DCAF1Q9Y4B6 1507 aa15.71■□□□□ 0.11
RFPL4B-201ENST00000441065 CUX2O14529 1486 aa15.59■□□□□ 0.09
RFPL4B-201ENST00000441065 ZCCHC6Q5VYS8 1495 aaKnown RBP15.55■□□□□ 0.08
RFPL4B-201ENST00000441065 SCRIBQ14160 1630 aa15.54■□□□□ 0.08
RFPL4B-201ENST00000441065 HRCP23327 699 aa15.43■□□□□ 0.06
RFPL4B-201ENST00000441065 ERCC6Q03468 1493 aa15.35■□□□□ 0.05
RFPL4B-201ENST00000441065 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
RFPL4B-201ENST00000441065 TRIM41Q8WV44 630 aa15.09■□□□□ 0.01
RFPL4B-201ENST00000441065 PELP1Q8IZL8 1130 aaKnown RBP15.04■□□□□ -0
RFPL4B-201ENST00000441065 HMGXB3Q12766 1538 aa15.02■□□□□ -0
RFPL4B-201ENST00000441065 ATAD2BQ9ULI0 1458 aa15.02■□□□□ -0
RFPL4B-201ENST00000441065 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
RFPL4B-201ENST00000441065 THOC2Q8NI27 1593 aaKnown RBP14.97□□□□□ -0.01
RFPL4B-201ENST00000441065 NESP48681 1621 aa14.96□□□□□ -0.02
RFPL4B-201ENST00000441065 LAMC3Q9Y6N6 1575 aa14.93□□□□□ -0.02
RFPL4B-201ENST00000441065 PDS5BQ9NTI5 1447 aa14.91□□□□□ -0.02
RFPL4B-201ENST00000441065 CHIC1Q5VXU3 224 aa14.91□□□□□ -0.02
RFPL4B-201ENST00000441065 SUPT5HO00267 1087 aaKnown RBP14.9□□□□□ -0.02
RFPL4B-201ENST00000441065 PCGF6Q9BYE7 350 aa14.88□□□□□ -0.03
RFPL4B-201ENST00000441065 PPARGC1BQ86YN6 1023 aaKnown RBP14.86□□□□□ -0.03
RFPL4B-201ENST00000441065 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
RFPL4B-201ENST00000441065 SMARCA4P51532 1647 aa14.83□□□□□ -0.04
RFPL4B-201ENST00000441065 OSCARQ8IYS5 282 aa14.79□□□□□ -0.04
RFPL4B-201ENST00000441065 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
RFPL4B-201ENST00000441065 BAZ1AQ9NRL2 1556 aaPredicted RBP14.76□□□□□ -0.05
RFPL4B-201ENST00000441065 MRC2Q9UBG0 1479 aa14.75□□□□□ -0.05
RFPL4B-201ENST00000441065 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
RFPL4B-201ENST00000441065 WDR62O43379 1518 aa14.71□□□□□ -0.05
RFPL4B-201ENST00000441065 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.05
RFPL4B-201ENST00000441065 TRIM26Q12899 539 aaPredicted RBP14.59□□□□□ -0.07
RFPL4B-201ENST00000441065 ZEB1P37275 1124 aaPredicted RBP14.58□□□□□ -0.08
RFPL4B-201ENST00000441065 CEP164Q9UPV0 1460 aa14.57□□□□□ -0.08
RFPL4B-201ENST00000441065 SCAF1Q9H7N4 1312 aaKnown RBP14.52□□□□□ -0.09
RFPL4B-201ENST00000441065 MYT1Q01538 1121 aa14.52□□□□□ -0.09
RFPL4B-201ENST00000441065 RIMBP3CA6NJZ7 1639 aa14.51□□□□□ -0.09
RFPL4B-201ENST00000441065 RIMBP3BA6NNM3 1639 aa14.51□□□□□ -0.09
RFPL4B-201ENST00000441065 RIMBP3Q9UFD9 1639 aa14.51□□□□□ -0.09
RFPL4B-201ENST00000441065 FANCD2Q9BXW9 1451 aa14.49□□□□□ -0.09
RFPL4B-201ENST00000441065 MROH2BQ7Z745 1585 aa14.49□□□□□ -0.09
RFPL4B-201ENST00000441065 AEBP2Q6ZN18 517 aaPredicted RBP14.45□□□□□ -0.1
RFPL4B-201ENST00000441065 ARHGEF11O15085 1522 aa14.44□□□□□ -0.1
RFPL4B-201ENST00000441065 CFTRP13569 1480 aa14.42□□□□□ -0.1
RFPL4B-201ENST00000441065 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
RFPL4B-201ENST00000441065 CYB5RLQ6IPT4 315 aa14.37□□□□□ -0.11
RFPL4B-201ENST00000441065 LOC105371045A0A1W2PR82 267 aa14.36□□□□□ -0.11
RFPL4B-201ENST00000441065 URB2Q14146 1524 aaKnown RBP14.35□□□□□ -0.11
RFPL4B-201ENST00000441065 IFT140Q96RY7 1462 aa14.35□□□□□ -0.11
RFPL4B-201ENST00000441065 RSF1Q96T23 1441 aaPredicted RBP14.29□□□□□ -0.12
RFPL4B-201ENST00000441065 WIZO95785 1651 aa14.25□□□□□ -0.13
RFPL4B-201ENST00000441065 ARAP1Q96P48 1450 aa14.24□□□□□ -0.13
RFPL4B-201ENST00000441065 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
RFPL4B-201ENST00000441065 ZNF608Q9ULD9 1512 aaPredicted RBP14.23□□□□□ -0.13
RFPL4B-201ENST00000441065 ACIN1Q9UKV3 1341 aaKnown RBP14.21□□□□□ -0.13
RFPL4B-201ENST00000441065 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
RFPL4B-201ENST00000441065 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
RFPL4B-201ENST00000441065 EIF4G3O43432 1585 aaKnown RBP14.14□□□□□ -0.15
RFPL4B-201ENST00000441065 TOPBP1Q92547 1522 aa14.14□□□□□ -0.15
RFPL4B-201ENST00000441065 CHD1O14646 1710 aa14.1□□□□□ -0.15
RFPL4B-201ENST00000441065 FBLN2P98095 1184 aa14.09□□□□□ -0.15
RFPL4B-201ENST00000441065 NEUROD1Q13562 356 aa14.08□□□□□ -0.16
RFPL4B-201ENST00000441065 DNMBPQ6XZF7 1577 aa14.06□□□□□ -0.16
RFPL4B-201ENST00000441065 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.16
RFPL4B-201ENST00000441065 TARBP1Q13395 1621 aaKnown RBP14.03□□□□□ -0.16
RFPL4B-201ENST00000441065 CENPBP07199 599 aaPredicted RBP14.03□□□□□ -0.16
RFPL4B-201ENST00000441065 WDR97A6NE52 1622 aa14.02□□□□□ -0.16
RFPL4B-201ENST00000441065 CLASP1Q7Z460 1538 aa14.02□□□□□ -0.17
RFPL4B-201ENST00000441065 SYNJ1O43426 1573 aa14.01□□□□□ -0.17
RFPL4B-201ENST00000441065 CHMP7Q8WUX9 453 aaPredicted RBP13.99□□□□□ -0.17
RFPL4B-201ENST00000441065 GTF3C3Q9Y5Q9 886 aa13.98□□□□□ -0.17
RFPL4B-201ENST00000441065 CCDC88BA6NC98 1476 aa13.96□□□□□ -0.17
RFPL4B-201ENST00000441065 MAGI1Q96QZ7 1491 aaPredicted RBP13.96□□□□□ -0.17
RFPL4B-201ENST00000441065 POLA1P09884 1462 aaPredicted RBP13.95□□□□□ -0.18
RFPL4B-201ENST00000441065 SOGA1O94964 1423 aa13.93□□□□□ -0.18
RFPL4B-201ENST00000441065 GAPVD1Q14C86 1478 aa13.92□□□□□ -0.18
RFPL4B-201ENST00000441065 SNAPC4Q5SXM2 1469 aa13.92□□□□□ -0.18
RFPL4B-201ENST00000441065 TDRD9Q8NDG6 1382 aaKnown RBP13.9□□□□□ -0.18
RFPL4B-201ENST00000441065 SYNJ2O15056 1496 aa13.9□□□□□ -0.18
RFPL4B-201ENST00000441065 GRIN2BQ13224 1484 aa13.89□□□□□ -0.19
RFPL4B-201ENST00000441065 DIEXFQ68CQ4 756 aaKnown RBP13.89□□□□□ -0.19
RFPL4B-201ENST00000441065 RAD54L2Q9Y4B4 1467 aa13.86□□□□□ -0.19
RFPL4B-201ENST00000441065 WRNQ14191 1432 aaPredicted RBP eCLIP13.81□□□□□ -0.2
RFPL4B-201ENST00000441065 ILDR1Q86SU0 546 aaPredicted RBP13.8□□□□□ -0.2
RFPL4B-201ENST00000441065 CCER1Q8TC90 406 aaPredicted RBP13.8□□□□□ -0.2
RFPL4B-201ENST00000441065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms