RNA–Protein interactions for RNA: ENST00000440925.1

PLOD3-205, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 4

Gene PLOD3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-205ENST00000440925 NISCHQ9Y2I1 1504 aa35.41■■■■□ 3.26
PLOD3-205ENST00000440925 CCDC180Q9P1Z9 1646 aa31.06■■■□□ 2.56
PLOD3-205ENST00000440925 ABCC9O60706 1549 aa30.12■■■□□ 2.41
PLOD3-205ENST00000440925 ZCCHC6Q5VYS8 1495 aaKnown RBP29.56■■■□□ 2.32
PLOD3-205ENST00000440925 DCAF8L2P0C7V8 631 aa29.43■■■□□ 2.3
PLOD3-205ENST00000440925 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
PLOD3-205ENST00000440925 MYO15BQ96JP2 1530 aa29.16■■■□□ 2.26
PLOD3-205ENST00000440925 NACADO15069 1562 aa29.16■■■□□ 2.26
PLOD3-205ENST00000440925 RB1CC1Q8TDY2 1594 aa29.03■■■□□ 2.24
PLOD3-205ENST00000440925 SCRIBQ14160 1630 aa28.49■■■□□ 2.15
PLOD3-205ENST00000440925 UNC13AQ9UPW8 1703 aa28.45■■■□□ 2.14
PLOD3-205ENST00000440925 SHROOM4Q9ULL8 1493 aa28.35■■■□□ 2.13
PLOD3-205ENST00000440925 PABPN1Q86U42 306 aaKnown RBP eCLIP28.35■■■□□ 2.13
PLOD3-205ENST00000440925 BICRAQ9NZM4 1560 aa28.33■■■□□ 2.13
PLOD3-205ENST00000440925 CECR2Q9BXF3 1484 aa27.65■■■□□ 2.02
PLOD3-205ENST00000440925 DNAJC5BQ9UF47 199 aa27.47■■□□□ 1.99
PLOD3-205ENST00000440925 EIF4G1Q04637 1599 aaKnown RBP27.43■■□□□ 1.98
PLOD3-205ENST00000440925 MROH2BQ7Z745 1585 aa27.35■■□□□ 1.97
PLOD3-205ENST00000440925 BAZ1AQ9NRL2 1556 aaPredicted RBP27.3■■□□□ 1.96
PLOD3-205ENST00000440925 SMARCA4P51532 1647 aa27.3■■□□□ 1.96
PLOD3-205ENST00000440925 RSF1Q96T23 1441 aaPredicted RBP27.24■■□□□ 1.95
PLOD3-205ENST00000440925 CC2D2AQ9P2K1 1620 aa27.21■■□□□ 1.95
PLOD3-205ENST00000440925 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
PLOD3-205ENST00000440925 PEG3Q9GZU2 1588 aa27.04■■□□□ 1.92
PLOD3-205ENST00000440925 WIZO95785 1651 aa27.04■■□□□ 1.92
PLOD3-205ENST00000440925 NCAPD3P42695 1498 aa27.02■■□□□ 1.92
PLOD3-205ENST00000440925 SMARCA2P51531 1590 aa26.95■■□□□ 1.9
PLOD3-205ENST00000440925 SUPT5HO00267 1087 aaKnown RBP26.94■■□□□ 1.9
PLOD3-205ENST00000440925 BAZ1BQ9UIG0 1483 aaKnown RBP26.81■■□□□ 1.88
PLOD3-205ENST00000440925 HMGXB3Q12766 1538 aa26.8■■□□□ 1.88
PLOD3-205ENST00000440925 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.86
PLOD3-205ENST00000440925 CCDC88BA6NC98 1476 aa26.52■■□□□ 1.84
PLOD3-205ENST00000440925 NESP48681 1621 aa26.28■■□□□ 1.8
PLOD3-205ENST00000440925 CADPSQ9ULU8 1353 aa26.25■■□□□ 1.79
PLOD3-205ENST00000440925 CFTRP13569 1480 aa26.19■■□□□ 1.78
PLOD3-205ENST00000440925 LAMC3Q9Y6N6 1575 aa26.07■■□□□ 1.76
PLOD3-205ENST00000440925 PDS5BQ9NTI5 1447 aa25.92■■□□□ 1.74
PLOD3-205ENST00000440925 FANCD2Q9BXW9 1451 aa25.9■■□□□ 1.74
PLOD3-205ENST00000440925 KIF21AQ7Z4S6 1674 aa25.83■■□□□ 1.73
PLOD3-205ENST00000440925 PRDM2Q13029 1718 aa25.81■■□□□ 1.72
PLOD3-205ENST00000440925 ERCC6Q03468 1493 aa25.76■■□□□ 1.71
PLOD3-205ENST00000440925 CEP164Q9UPV0 1460 aa25.74■■□□□ 1.71
PLOD3-205ENST00000440925 URB2Q14146 1524 aaKnown RBP25.68■■□□□ 1.7
PLOD3-205ENST00000440925 ABCC8Q09428 1581 aa25.66■■□□□ 1.7
PLOD3-205ENST00000440925 MRC2Q9UBG0 1479 aa25.64■■□□□ 1.69
PLOD3-205ENST00000440925 THOC2Q8NI27 1593 aaKnown RBP25.62■■□□□ 1.69
PLOD3-205ENST00000440925 CUX1P39880 1505 aa25.6■■□□□ 1.69
PLOD3-205ENST00000440925 TOPBP1Q92547 1522 aa25.56■■□□□ 1.68
PLOD3-205ENST00000440925 WRNQ14191 1432 aaPredicted RBP eCLIP25.55■■□□□ 1.68
PLOD3-205ENST00000440925 WDR62O43379 1518 aa25.54■■□□□ 1.68
PLOD3-205ENST00000440925 CHIC1Q5VXU3 224 aa25.52■■□□□ 1.68
PLOD3-205ENST00000440925 SYNJ1O43426 1573 aa25.51■■□□□ 1.67
PLOD3-205ENST00000440925 DNMBPQ6XZF7 1577 aa25.5■■□□□ 1.67
PLOD3-205ENST00000440925 TOP2BQ02880 1626 aa25.43■■□□□ 1.66
PLOD3-205ENST00000440925 CUX2O14529 1486 aa25.42■■□□□ 1.66
PLOD3-205ENST00000440925 BIVM-ERCC5R4GMW8 1640 aa25.4■■□□□ 1.66
PLOD3-205ENST00000440925 POLA1P09884 1462 aaPredicted RBP25.39■■□□□ 1.65
PLOD3-205ENST00000440925 FGD5Q6ZNL6 1462 aa25.38■■□□□ 1.65
PLOD3-205ENST00000440925 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
PLOD3-205ENST00000440925 RAD54L2Q9Y4B4 1467 aa25.35■■□□□ 1.65
PLOD3-205ENST00000440925 SOGA1O94964 1423 aa25.31■■□□□ 1.64
PLOD3-205ENST00000440925 TARBP1Q13395 1621 aaKnown RBP25.25■■□□□ 1.63
PLOD3-205ENST00000440925 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
PLOD3-205ENST00000440925 ZNF608Q9ULD9 1512 aaPredicted RBP25.2■■□□□ 1.62
PLOD3-205ENST00000440925 TDRD9Q8NDG6 1382 aaKnown RBP25.17■■□□□ 1.62
PLOD3-205ENST00000440925 ABCA10Q8WWZ4 1543 aa25.16■■□□□ 1.62
PLOD3-205ENST00000440925 AQRO60306 1485 aaKnown RBP eCLIP25.13■■□□□ 1.618e-8■■■■■ 35.3
PLOD3-205ENST00000440925 RUSC2Q8N2Y8 1516 aa25.12■■□□□ 1.61
PLOD3-205ENST00000440925 WDR97A6NE52 1622 aa25.08■■□□□ 1.61
PLOD3-205ENST00000440925 GAPVD1Q14C86 1478 aa24.98■■□□□ 1.59
PLOD3-205ENST00000440925 ABCA5Q8WWZ7 1642 aa24.97■■□□□ 1.59
PLOD3-205ENST00000440925 IGF1RP08069 1367 aa24.97■■□□□ 1.59
PLOD3-205ENST00000440925 EIF4G3O43432 1585 aaKnown RBP24.96■■□□□ 1.59
PLOD3-205ENST00000440925 KIF27Q86VH2 1401 aa24.95■■□□□ 1.58
PLOD3-205ENST00000440925 FAM9AQ8IZU1 332 aaPredicted RBP24.9■■□□□ 1.58
PLOD3-205ENST00000440925 GRIN2BQ13224 1484 aa24.89■■□□□ 1.57
PLOD3-205ENST00000440925 CSRNP3Q8WYN3 585 aa24.84■■□□□ 1.57
PLOD3-205ENST00000440925 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
PLOD3-205ENST00000440925 SNAPC4Q5SXM2 1469 aa24.8■■□□□ 1.56
PLOD3-205ENST00000440925 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
PLOD3-205ENST00000440925 EEA1Q15075 1411 aa24.76■■□□□ 1.55
PLOD3-205ENST00000440925 CARMIL1Q5VZK9 1371 aa24.75■■□□□ 1.55
PLOD3-205ENST00000440925 MAGI1Q96QZ7 1491 aaPredicted RBP24.72■■□□□ 1.55
PLOD3-205ENST00000440925 PRXQ9BXM0 1461 aa24.7■■□□□ 1.55
PLOD3-205ENST00000440925 FHAD1B1AJZ9 1412 aa24.7■■□□□ 1.55
PLOD3-205ENST00000440925 ADAMTS12P58397 1594 aa24.67■■□□□ 1.54
PLOD3-205ENST00000440925 SYNJ2O15056 1496 aa24.65■■□□□ 1.54
PLOD3-205ENST00000440925 FBLN2P98095 1184 aa24.65■■□□□ 1.54
PLOD3-205ENST00000440925 CHMP7Q8WUX9 453 aaPredicted RBP24.65■■□□□ 1.54
PLOD3-205ENST00000440925 CUL7Q14999 1698 aa24.59■■□□□ 1.53
PLOD3-205ENST00000440925 RAPGEF2Q9Y4G8 1499 aa24.59■■□□□ 1.53
PLOD3-205ENST00000440925 GRIN2AQ12879 1464 aa24.57■■□□□ 1.52
PLOD3-205ENST00000440925 EHMT2Q96KQ7 1210 aa24.56■■□□□ 1.52
PLOD3-205ENST00000440925 LOC105371045A0A1W2PR82 267 aa24.55■■□□□ 1.52
PLOD3-205ENST00000440925 CHD1O14646 1710 aa24.55■■□□□ 1.52
PLOD3-205ENST00000440925 OSCARQ8IYS5 282 aa24.5■■□□□ 1.51
PLOD3-205ENST00000440925 NUP160Q12769 1436 aa24.49■■□□□ 1.51
PLOD3-205ENST00000440925 KIF21BO75037 1637 aa24.48■■□□□ 1.51
PLOD3-205ENST00000440925 CEP170Q5SW79 1584 aa24.46■■□□□ 1.51
PLOD3-205ENST00000440925 GOLGA3Q08378 1498 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms