RNA–Protein interactions for RNA: ENST00000440915.1

AP004290.1-201, humanhuman

BASIC

Gene AP004290.1, Length 1,412 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004290.1-201ENST00000440915 NISCHQ9Y2I1 1504 aa24.04■■□□□ 1.44
AP004290.1-201ENST00000440915 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
AP004290.1-201ENST00000440915 CCDC180Q9P1Z9 1646 aa21.12■□□□□ 0.97
AP004290.1-201ENST00000440915 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
AP004290.1-201ENST00000440915 ABCC9O60706 1549 aa20.22■□□□□ 0.83
AP004290.1-201ENST00000440915 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
AP004290.1-201ENST00000440915 DCAF8L2P0C7V8 631 aa19.92■□□□□ 0.78
AP004290.1-201ENST00000440915 DCAF1Q9Y4B6 1507 aa19.89■□□□□ 0.77
AP004290.1-201ENST00000440915 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.76
AP004290.1-201ENST00000440915 NACADO15069 1562 aa19.74■□□□□ 0.75
AP004290.1-201ENST00000440915 RB1CC1Q8TDY2 1594 aa19.65■□□□□ 0.74
AP004290.1-201ENST00000440915 SCRIBQ14160 1630 aa19.34■□□□□ 0.69
AP004290.1-201ENST00000440915 SHROOM4Q9ULL8 1493 aa19.34■□□□□ 0.69
AP004290.1-201ENST00000440915 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
AP004290.1-201ENST00000440915 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
AP004290.1-201ENST00000440915 PABPN1Q86U42 306 aaKnown RBP eCLIP19■□□□□ 0.63
AP004290.1-201ENST00000440915 CECR2Q9BXF3 1484 aa18.69■□□□□ 0.58
AP004290.1-201ENST00000440915 BAZ1AQ9NRL2 1556 aaPredicted RBP18.58■□□□□ 0.56
AP004290.1-201ENST00000440915 MROH2BQ7Z745 1585 aa18.55■□□□□ 0.56
AP004290.1-201ENST00000440915 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
AP004290.1-201ENST00000440915 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
AP004290.1-201ENST00000440915 EIF4G1Q04637 1599 aaKnown RBP18.51■□□□□ 0.55
AP004290.1-201ENST00000440915 SUPT5HO00267 1087 aaKnown RBP18.45■□□□□ 0.54
AP004290.1-201ENST00000440915 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
AP004290.1-201ENST00000440915 WIZO95785 1651 aa18.38■□□□□ 0.53
AP004290.1-201ENST00000440915 PEG3Q9GZU2 1588 aa18.33■□□□□ 0.53
AP004290.1-201ENST00000440915 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
AP004290.1-201ENST00000440915 CC2D2AQ9P2K1 1620 aa18.31■□□□□ 0.52
AP004290.1-201ENST00000440915 SMARCA2P51531 1590 aa18.3■□□□□ 0.52
AP004290.1-201ENST00000440915 NCAPD3P42695 1498 aa18.22■□□□□ 0.51
AP004290.1-201ENST00000440915 TOP2AP11388 1531 aaKnown RBP18.19■□□□□ 0.5
AP004290.1-201ENST00000440915 BAZ1BQ9UIG0 1483 aaKnown RBP18.18■□□□□ 0.5
AP004290.1-201ENST00000440915 HMGXB3Q12766 1538 aa18.17■□□□□ 0.5
AP004290.1-201ENST00000440915 DNAJC5BQ9UF47 199 aa18.13■□□□□ 0.49
AP004290.1-201ENST00000440915 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
AP004290.1-201ENST00000440915 CCDC88BA6NC98 1476 aa17.99■□□□□ 0.47
AP004290.1-201ENST00000440915 CADPSQ9ULU8 1353 aa17.72■□□□□ 0.43
AP004290.1-201ENST00000440915 CFTRP13569 1480 aa17.72■□□□□ 0.43
AP004290.1-201ENST00000440915 LAMC3Q9Y6N6 1575 aa17.66■□□□□ 0.42
AP004290.1-201ENST00000440915 NESP48681 1621 aa17.66■□□□□ 0.42
AP004290.1-201ENST00000440915 PRDM2Q13029 1718 aa17.62■□□□□ 0.41
AP004290.1-201ENST00000440915 FANCD2Q9BXW9 1451 aa17.53■□□□□ 0.4
AP004290.1-201ENST00000440915 PDS5BQ9NTI5 1447 aa17.52■□□□□ 0.4
AP004290.1-201ENST00000440915 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
AP004290.1-201ENST00000440915 CEP164Q9UPV0 1460 aa17.46■□□□□ 0.38
AP004290.1-201ENST00000440915 KIF21AQ7Z4S6 1674 aa17.45■□□□□ 0.38
AP004290.1-201ENST00000440915 WRNQ14191 1432 aaPredicted RBP eCLIP17.44■□□□□ 0.38
AP004290.1-201ENST00000440915 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
AP004290.1-201ENST00000440915 ERCC6Q03468 1493 aa17.37■□□□□ 0.37
AP004290.1-201ENST00000440915 CUX1P39880 1505 aa17.37■□□□□ 0.37
AP004290.1-201ENST00000440915 SYNJ1O43426 1573 aa17.37■□□□□ 0.37
AP004290.1-201ENST00000440915 TOP2BQ02880 1626 aa17.34■□□□□ 0.37
AP004290.1-201ENST00000440915 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.37
AP004290.1-201ENST00000440915 URB2Q14146 1524 aaKnown RBP17.33■□□□□ 0.36
AP004290.1-201ENST00000440915 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
AP004290.1-201ENST00000440915 MRC2Q9UBG0 1479 aa17.32■□□□□ 0.36
AP004290.1-201ENST00000440915 TOPBP1Q92547 1522 aa17.3■□□□□ 0.36
AP004290.1-201ENST00000440915 THOC2Q8NI27 1593 aaKnown RBP17.26■□□□□ 0.35
AP004290.1-201ENST00000440915 WDR62O43379 1518 aa17.24■□□□□ 0.35
AP004290.1-201ENST00000440915 FGD5Q6ZNL6 1462 aa17.22■□□□□ 0.35
AP004290.1-201ENST00000440915 POLA1P09884 1462 aaPredicted RBP17.19■□□□□ 0.34
AP004290.1-201ENST00000440915 SOGA1O94964 1423 aa17.13■□□□□ 0.33
AP004290.1-201ENST00000440915 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
AP004290.1-201ENST00000440915 CUX2O14529 1486 aa17.1■□□□□ 0.33
AP004290.1-201ENST00000440915 TARBP1Q13395 1621 aaKnown RBP17.07■□□□□ 0.32
AP004290.1-201ENST00000440915 RUSC2Q8N2Y8 1516 aa17.07■□□□□ 0.32
AP004290.1-201ENST00000440915 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
AP004290.1-201ENST00000440915 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
AP004290.1-201ENST00000440915 WDR97A6NE52 1622 aa17.05■□□□□ 0.32
AP004290.1-201ENST00000440915 FAM9AQ8IZU1 332 aaPredicted RBP17.04■□□□□ 0.32
AP004290.1-201ENST00000440915 EEA1Q15075 1411 aa17.03■□□□□ 0.32
AP004290.1-201ENST00000440915 KIF27Q86VH2 1401 aa17.02■□□□□ 0.32
AP004290.1-201ENST00000440915 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
AP004290.1-201ENST00000440915 ABCA5Q8WWZ7 1642 aa16.96■□□□□ 0.31
AP004290.1-201ENST00000440915 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.31
AP004290.1-201ENST00000440915 CSRNP3Q8WYN3 585 aa16.96■□□□□ 0.3
AP004290.1-201ENST00000440915 GAPVD1Q14C86 1478 aa16.94■□□□□ 0.3
AP004290.1-201ENST00000440915 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.3
AP004290.1-201ENST00000440915 IGF1RP08069 1367 aa16.91■□□□□ 0.3
AP004290.1-201ENST00000440915 PLPPR3Q6T4P5 718 aa16.9■□□□□ 0.3
AP004290.1-201ENST00000440915 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
AP004290.1-201ENST00000440915 FOXD1Q16676 465 aa16.89■□□□□ 0.29
AP004290.1-201ENST00000440915 PBRM1Q86U86 1689 aa16.87■□□□□ 0.29
AP004290.1-201ENST00000440915 ERICH3Q5RHP9 1530 aa16.87■□□□□ 0.29
AP004290.1-201ENST00000440915 GRIN2BQ13224 1484 aa16.85■□□□□ 0.29
AP004290.1-201ENST00000440915 PRXQ9BXM0 1461 aa16.83■□□□□ 0.28
AP004290.1-201ENST00000440915 KIF21BO75037 1637 aa16.82■□□□□ 0.28
AP004290.1-201ENST00000440915 CUL7Q14999 1698 aa16.82■□□□□ 0.28
AP004290.1-201ENST00000440915 LOC105371045A0A1W2PR82 267 aa16.81■□□□□ 0.28
AP004290.1-201ENST00000440915 CARMIL1Q5VZK9 1371 aa16.81■□□□□ 0.28
AP004290.1-201ENST00000440915 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
AP004290.1-201ENST00000440915 GOLGA3Q08378 1498 aa16.78■□□□□ 0.28
AP004290.1-201ENST00000440915 SNAPC4Q5SXM2 1469 aa16.78■□□□□ 0.28
AP004290.1-201ENST00000440915 RAPGEF2Q9Y4G8 1499 aa16.77■□□□□ 0.27
AP004290.1-201ENST00000440915 ADAMTS12P58397 1594 aa16.76■□□□□ 0.27
AP004290.1-201ENST00000440915 FHAD1B1AJZ9 1412 aa16.75■□□□□ 0.27
AP004290.1-201ENST00000440915 MAGI1Q96QZ7 1491 aaPredicted RBP16.74■□□□□ 0.27
AP004290.1-201ENST00000440915 UBTFP17480 764 aaKnown RBP16.7■□□□□ 0.26
AP004290.1-201ENST00000440915 SYNJ2O15056 1496 aa16.69■□□□□ 0.26
AP004290.1-201ENST00000440915 TNIKQ9UKE5 1360 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms