RNA–Protein interactions for RNA: ENST00000440813.1

TSSC4-206, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 3

Gene TSSC4, Length 851 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-206ENST00000440813 NISCHQ9Y2I1 1504 aa48.77■■■■■ 5.4
TSSC4-206ENST00000440813 CCDC180Q9P1Z9 1646 aa43.26■■■■■ 4.52
TSSC4-206ENST00000440813 ABCC9O60706 1549 aa42.33■■■■■ 4.37
TSSC4-206ENST00000440813 DCAF8L2P0C7V8 631 aa40.86■■■■■ 4.13
TSSC4-206ENST00000440813 RB1CC1Q8TDY2 1594 aa40.69■■■■■ 4.11
TSSC4-206ENST00000440813 NACADO15069 1562 aa40.66■■■■■ 4.1
TSSC4-206ENST00000440813 ZCCHC6Q5VYS8 1495 aaKnown RBP40.64■■■■■ 4.1
TSSC4-206ENST00000440813 MYO15BQ96JP2 1530 aa40.41■■■■■ 4.06
TSSC4-206ENST00000440813 DCAF1Q9Y4B6 1507 aa40.3■■■■■ 4.04
TSSC4-206ENST00000440813 UNC13AQ9UPW8 1703 aa39.79■■■■□ 3.96
TSSC4-206ENST00000440813 PABPN1Q86U42 306 aaKnown RBP eCLIP39.63■■■■□ 3.93
TSSC4-206ENST00000440813 SCRIBQ14160 1630 aa39.58■■■■□ 3.93
TSSC4-206ENST00000440813 BICRAQ9NZM4 1560 aa39.46■■■■□ 3.91
TSSC4-206ENST00000440813 SHROOM4Q9ULL8 1493 aa38.98■■■■□ 3.83
TSSC4-206ENST00000440813 DNAJC5BQ9UF47 199 aa38.77■■■■□ 3.8
TSSC4-206ENST00000440813 EIF4G1Q04637 1599 aaKnown RBP38.42■■■■□ 3.74
TSSC4-206ENST00000440813 CC2D2AQ9P2K1 1620 aa38.25■■■■□ 3.71
TSSC4-206ENST00000440813 CECR2Q9BXF3 1484 aa38.03■■■■□ 3.68
TSSC4-206ENST00000440813 SMARCA4P51532 1647 aa37.82■■■■□ 3.64
TSSC4-206ENST00000440813 BAZ1AQ9NRL2 1556 aaPredicted RBP37.78■■■■□ 3.64
TSSC4-206ENST00000440813 MROH2BQ7Z745 1585 aa37.62■■■■□ 3.61
TSSC4-206ENST00000440813 ATAD2BQ9ULI0 1458 aa37.59■■■■□ 3.61
TSSC4-206ENST00000440813 NCAPD3P42695 1498 aa37.53■■■■□ 3.6
TSSC4-206ENST00000440813 SMARCA2P51531 1590 aa37.53■■■■□ 3.6
TSSC4-206ENST00000440813 PEG3Q9GZU2 1588 aa37.39■■■■□ 3.58
TSSC4-206ENST00000440813 HMGXB3Q12766 1538 aa37.34■■■■□ 3.57
TSSC4-206ENST00000440813 BAZ1BQ9UIG0 1483 aaKnown RBP37.3■■■■□ 3.56
TSSC4-206ENST00000440813 WIZO95785 1651 aa37.23■■■■□ 3.55
TSSC4-206ENST00000440813 RSF1Q96T23 1441 aaPredicted RBP37.23■■■■□ 3.55
TSSC4-206ENST00000440813 TOP2AP11388 1531 aaKnown RBP36.8■■■■□ 3.48
TSSC4-206ENST00000440813 NESP48681 1621 aa36.67■■■■□ 3.46
TSSC4-206ENST00000440813 LAMC3Q9Y6N6 1575 aa36.52■■■■□ 3.44
TSSC4-206ENST00000440813 SUPT5HO00267 1087 aaKnown RBP36.49■■■■□ 3.43
TSSC4-206ENST00000440813 CADPSQ9ULU8 1353 aa36.48■■■■□ 3.43
TSSC4-206ENST00000440813 ERCC6Q03468 1493 aa36.47■■■■□ 3.43
TSSC4-206ENST00000440813 CCDC88BA6NC98 1476 aa36.41■■■■□ 3.42
TSSC4-206ENST00000440813 PDS5BQ9NTI5 1447 aa36.3■■■■□ 3.4
TSSC4-206ENST00000440813 CFTRP13569 1480 aa36.26■■■■□ 3.4
TSSC4-206ENST00000440813 KIF21AQ7Z4S6 1674 aa36.19■■■■□ 3.38
TSSC4-206ENST00000440813 FANCD2Q9BXW9 1451 aa36.06■■■■□ 3.36
TSSC4-206ENST00000440813 THOC2Q8NI27 1593 aaKnown RBP36.02■■■■□ 3.36
TSSC4-206ENST00000440813 CEP164Q9UPV0 1460 aa36■■■■□ 3.35
TSSC4-206ENST00000440813 CUX2O14529 1486 aa35.97■■■■□ 3.35
TSSC4-206ENST00000440813 PRDM2Q13029 1718 aa35.97■■■■□ 3.35
TSSC4-206ENST00000440813 MRC2Q9UBG0 1479 aa35.92■■■■□ 3.34
TSSC4-206ENST00000440813 WDR62O43379 1518 aa35.77■■■■□ 3.32
TSSC4-206ENST00000440813 URB2Q14146 1524 aaKnown RBP35.69■■■■□ 3.3
TSSC4-206ENST00000440813 TOPBP1Q92547 1522 aa35.49■■■■□ 3.27
TSSC4-206ENST00000440813 ABCC8Q09428 1581 aa35.47■■■■□ 3.27
TSSC4-206ENST00000440813 DNMBPQ6XZF7 1577 aa35.44■■■■□ 3.26
TSSC4-206ENST00000440813 CUX1P39880 1505 aa35.27■■■■□ 3.24
TSSC4-206ENST00000440813 IFT140Q96RY7 1462 aa35.22■■■■□ 3.23
TSSC4-206ENST00000440813 POLA1P09884 1462 aaPredicted RBP35.2■■■■□ 3.23
TSSC4-206ENST00000440813 FGD5Q6ZNL6 1462 aa35.15■■■■□ 3.22
TSSC4-206ENST00000440813 WRNQ14191 1432 aaPredicted RBP eCLIP35.1■■■■□ 3.21
TSSC4-206ENST00000440813 ZNF608Q9ULD9 1512 aaPredicted RBP35.1■■■■□ 3.21
TSSC4-206ENST00000440813 SOGA1O94964 1423 aa35.09■■■■□ 3.21
TSSC4-206ENST00000440813 RAD54L2Q9Y4B4 1467 aa35.09■■■■□ 3.21
TSSC4-206ENST00000440813 TARBP1Q13395 1621 aaKnown RBP35.07■■■■□ 3.21
TSSC4-206ENST00000440813 SYNJ1O43426 1573 aa35■■■■□ 3.19
TSSC4-206ENST00000440813 TOP2BQ02880 1626 aa34.98■■■■□ 3.19
TSSC4-206ENST00000440813 BIVM-ERCC5R4GMW8 1640 aa34.96■■■■□ 3.19
TSSC4-206ENST00000440813 EIF4G3O43432 1585 aaKnown RBP34.93■■■■□ 3.18
TSSC4-206ENST00000440813 AQRO60306 1485 aaKnown RBP eCLIP34.93■■■■□ 3.18
TSSC4-206ENST00000440813 TDRD9Q8NDG6 1382 aaKnown RBP34.9■■■■□ 3.18
TSSC4-206ENST00000440813 WDR97A6NE52 1622 aa34.8■■■■□ 3.16
TSSC4-206ENST00000440813 ABCA10Q8WWZ4 1543 aa34.78■■■■□ 3.16
TSSC4-206ENST00000440813 DNAJC5Q9H3Z4 198 aa34.78■■■■□ 3.16
TSSC4-206ENST00000440813 GAPVD1Q14C86 1478 aa34.66■■■■□ 3.14
TSSC4-206ENST00000440813 GRIN2BQ13224 1484 aa34.63■■■■□ 3.13
TSSC4-206ENST00000440813 ABCA5Q8WWZ7 1642 aa34.63■■■■□ 3.13
TSSC4-206ENST00000440813 SNAPC4Q5SXM2 1469 aa34.59■■■■□ 3.13
TSSC4-206ENST00000440813 OSCARQ8IYS5 282 aa34.58■■■■□ 3.13
TSSC4-206ENST00000440813 PBRM1Q86U86 1689 aa34.57■■■■□ 3.12
TSSC4-206ENST00000440813 FBLN2P98095 1184 aa34.55■■■■□ 3.12
TSSC4-206ENST00000440813 MAGI1Q96QZ7 1491 aaPredicted RBP34.51■■■■□ 3.11
TSSC4-206ENST00000440813 CHD1O14646 1710 aa34.48■■■■□ 3.11
TSSC4-206ENST00000440813 CHMP7Q8WUX9 453 aaPredicted RBP34.43■■■■□ 3.1
TSSC4-206ENST00000440813 TRIM41Q8WV44 630 aa34.42■■■■□ 3.1
TSSC4-206ENST00000440813 SYNJ2O15056 1496 aa34.39■■■■□ 3.1
TSSC4-206ENST00000440813 KIF27Q86VH2 1401 aa34.36■■■■□ 3.09
TSSC4-206ENST00000440813 ERICH3Q5RHP9 1530 aa34.35■■■■□ 3.09
TSSC4-206ENST00000440813 ADAMTS12P58397 1594 aa34.3■■■■□ 3.08
TSSC4-206ENST00000440813 FHAD1B1AJZ9 1412 aa34.26■■■■□ 3.07
TSSC4-206ENST00000440813 IGF1RP08069 1367 aa34.22■■■■□ 3.07
TSSC4-206ENST00000440813 GRIN2AQ12879 1464 aa34.19■■■■□ 3.06
TSSC4-206ENST00000440813 RUSC2Q8N2Y8 1516 aa34.13■■■■□ 3.05
TSSC4-206ENST00000440813 CLASP1Q7Z460 1538 aa34.09■■■■□ 3.05
TSSC4-206ENST00000440813 CUL7Q14999 1698 aa34.07■■■■□ 3.04
TSSC4-206ENST00000440813 CHIC1Q5VXU3 224 aa34.07■■■■□ 3.04
TSSC4-206ENST00000440813 CEP170Q5SW79 1584 aa34.02■■■■□ 3.04
TSSC4-206ENST00000440813 CARMIL1Q5VZK9 1371 aa34.02■■■■□ 3.04
TSSC4-206ENST00000440813 NUP160Q12769 1436 aa34.01■■■■□ 3.03
TSSC4-206ENST00000440813 RIMBP3CA6NJZ7 1639 aa33.98■■■■□ 3.03
TSSC4-206ENST00000440813 RIMBP3BA6NNM3 1639 aa33.98■■■■□ 3.03
TSSC4-206ENST00000440813 RIMBP3Q9UFD9 1639 aa33.98■■■■□ 3.03
TSSC4-206ENST00000440813 ARHGEF11O15085 1522 aa33.98■■■■□ 3.03
TSSC4-206ENST00000440813 RAPGEF2Q9Y4G8 1499 aa33.82■■■■□ 3
TSSC4-206ENST00000440813 FAM9AQ8IZU1 332 aaPredicted RBP33.77■■■■□ 3
TSSC4-206ENST00000440813 CSRNP3Q8WYN3 585 aa33.76■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 488.5 ms