RNA–Protein interactions for RNA: ENST00000440711.1

LINC01006-205, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 336 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-205ENST00000440711 NISCHQ9Y2I1 1504 aa22.66■■□□□ 1.22
LINC01006-205ENST00000440711 CCDC180Q9P1Z9 1646 aa20.14■□□□□ 0.81
LINC01006-205ENST00000440711 ABCC9O60706 1549 aa19.98■□□□□ 0.79
LINC01006-205ENST00000440711 DNAJC5BQ9UF47 199 aa19.22■□□□□ 0.67
LINC01006-205ENST00000440711 DCAF8L2P0C7V8 631 aa19.14■□□□□ 0.65
LINC01006-205ENST00000440711 RB1CC1Q8TDY2 1594 aa19.14■□□□□ 0.65
LINC01006-205ENST00000440711 NACADO15069 1562 aa19.1■□□□□ 0.65
LINC01006-205ENST00000440711 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
LINC01006-205ENST00000440711 ZCCHC6Q5VYS8 1495 aaKnown RBP18.77■□□□□ 0.6
LINC01006-205ENST00000440711 DCAF1Q9Y4B6 1507 aa18.76■□□□□ 0.59
LINC01006-205ENST00000440711 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
LINC01006-205ENST00000440711 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.56
LINC01006-205ENST00000440711 BICRAQ9NZM4 1560 aa18.51■□□□□ 0.55
LINC01006-205ENST00000440711 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.54
LINC01006-205ENST00000440711 SCRIBQ14160 1630 aa18.32■□□□□ 0.52
LINC01006-205ENST00000440711 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
LINC01006-205ENST00000440711 EIF4G1Q04637 1599 aaKnown RBP18.06■□□□□ 0.48
LINC01006-205ENST00000440711 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
LINC01006-205ENST00000440711 CECR2Q9BXF3 1484 aa18.02■□□□□ 0.48
LINC01006-205ENST00000440711 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
LINC01006-205ENST00000440711 ATAD2BQ9ULI0 1458 aa17.61■□□□□ 0.41
LINC01006-205ENST00000440711 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
LINC01006-205ENST00000440711 SMARCA4P51532 1647 aa17.55■□□□□ 0.4
LINC01006-205ENST00000440711 SMARCA2P51531 1590 aa17.55■□□□□ 0.4
LINC01006-205ENST00000440711 HMGXB3Q12766 1538 aa17.47■□□□□ 0.39
LINC01006-205ENST00000440711 PEG3Q9GZU2 1588 aa17.44■□□□□ 0.38
LINC01006-205ENST00000440711 BAZ1BQ9UIG0 1483 aaKnown RBP17.42■□□□□ 0.38
LINC01006-205ENST00000440711 MROH2BQ7Z745 1585 aa17.41■□□□□ 0.38
LINC01006-205ENST00000440711 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
LINC01006-205ENST00000440711 ERCC6Q03468 1493 aa17.27■□□□□ 0.36
LINC01006-205ENST00000440711 NESP48681 1621 aa17.21■□□□□ 0.35
LINC01006-205ENST00000440711 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.34
LINC01006-205ENST00000440711 CUX2O14529 1486 aa17.19■□□□□ 0.34
LINC01006-205ENST00000440711 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
LINC01006-205ENST00000440711 WIZO95785 1651 aa17.16■□□□□ 0.34
LINC01006-205ENST00000440711 LAMC3Q9Y6N6 1575 aa17.16■□□□□ 0.34
LINC01006-205ENST00000440711 PDS5BQ9NTI5 1447 aa17.16■□□□□ 0.34
LINC01006-205ENST00000440711 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
LINC01006-205ENST00000440711 CFTRP13569 1480 aa16.98■□□□□ 0.31
LINC01006-205ENST00000440711 THOC2Q8NI27 1593 aaKnown RBP16.92■□□□□ 0.3
LINC01006-205ENST00000440711 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
LINC01006-205ENST00000440711 KIF21AQ7Z4S6 1674 aa16.89■□□□□ 0.29
LINC01006-205ENST00000440711 FANCD2Q9BXW9 1451 aa16.89■□□□□ 0.29
LINC01006-205ENST00000440711 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
LINC01006-205ENST00000440711 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
LINC01006-205ENST00000440711 WDR62O43379 1518 aa16.82■□□□□ 0.28
LINC01006-205ENST00000440711 URB2Q14146 1524 aaKnown RBP16.7■□□□□ 0.26
LINC01006-205ENST00000440711 ABCC8Q09428 1581 aa16.67■□□□□ 0.26
LINC01006-205ENST00000440711 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
LINC01006-205ENST00000440711 PRDM2Q13029 1718 aa16.61■□□□□ 0.25
LINC01006-205ENST00000440711 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
LINC01006-205ENST00000440711 TOPBP1Q92547 1522 aa16.57■□□□□ 0.24
LINC01006-205ENST00000440711 IFT140Q96RY7 1462 aa16.57■□□□□ 0.24
LINC01006-205ENST00000440711 DNMBPQ6XZF7 1577 aa16.51■□□□□ 0.23
LINC01006-205ENST00000440711 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
LINC01006-205ENST00000440711 ZNF608Q9ULD9 1512 aaPredicted RBP16.45■□□□□ 0.22
LINC01006-205ENST00000440711 SOGA1O94964 1423 aa16.45■□□□□ 0.22
LINC01006-205ENST00000440711 POLA1P09884 1462 aaPredicted RBP16.42■□□□□ 0.22
LINC01006-205ENST00000440711 AQRO60306 1485 aaKnown RBP eCLIP16.4■□□□□ 0.22
LINC01006-205ENST00000440711 TARBP1Q13395 1621 aaKnown RBP16.37■□□□□ 0.21
LINC01006-205ENST00000440711 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
LINC01006-205ENST00000440711 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
LINC01006-205ENST00000440711 CUX1P39880 1505 aa16.34■□□□□ 0.21
LINC01006-205ENST00000440711 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.2
LINC01006-205ENST00000440711 FBLN2P98095 1184 aa16.31■□□□□ 0.2
LINC01006-205ENST00000440711 EIF4G3O43432 1585 aaKnown RBP16.3■□□□□ 0.2
LINC01006-205ENST00000440711 WDR97A6NE52 1622 aa16.27■□□□□ 0.2
LINC01006-205ENST00000440711 CHMP7Q8WUX9 453 aaPredicted RBP16.26■□□□□ 0.19
LINC01006-205ENST00000440711 TRHP20396 242 aaPredicted RBP16.25■□□□□ 0.19
LINC01006-205ENST00000440711 WRNQ14191 1432 aaPredicted RBP eCLIP16.24■□□□□ 0.19
LINC01006-205ENST00000440711 GRIN2BQ13224 1484 aa16.23■□□□□ 0.19
LINC01006-205ENST00000440711 ABCA10Q8WWZ4 1543 aa16.21■□□□□ 0.19
LINC01006-205ENST00000440711 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
LINC01006-205ENST00000440711 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
LINC01006-205ENST00000440711 RIMBP3CA6NJZ7 1639 aa16.19■□□□□ 0.18
LINC01006-205ENST00000440711 RIMBP3BA6NNM3 1639 aa16.19■□□□□ 0.18
LINC01006-205ENST00000440711 RIMBP3Q9UFD9 1639 aa16.19■□□□□ 0.18
LINC01006-205ENST00000440711 SNAPC4Q5SXM2 1469 aa16.17■□□□□ 0.18
LINC01006-205ENST00000440711 TOP2BQ02880 1626 aa16.15■□□□□ 0.18
LINC01006-205ENST00000440711 SYNJ2O15056 1496 aa16.14■□□□□ 0.17
LINC01006-205ENST00000440711 CYB5RLQ6IPT4 315 aa16.13■□□□□ 0.17
LINC01006-205ENST00000440711 ARHGEF11O15085 1522 aa16.12■□□□□ 0.17
LINC01006-205ENST00000440711 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
LINC01006-205ENST00000440711 CHD1O14646 1710 aa16.09■□□□□ 0.17
LINC01006-205ENST00000440711 SYNJ1O43426 1573 aa16.08■□□□□ 0.16
LINC01006-205ENST00000440711 ABCA5Q8WWZ7 1642 aa16.06■□□□□ 0.16
LINC01006-205ENST00000440711 FHAD1B1AJZ9 1412 aa16.02■□□□□ 0.16
LINC01006-205ENST00000440711 CLASP1Q7Z460 1538 aa16.02■□□□□ 0.15
LINC01006-205ENST00000440711 ERICH3Q5RHP9 1530 aa16■□□□□ 0.15
LINC01006-205ENST00000440711 PBRM1Q86U86 1689 aa16■□□□□ 0.15
LINC01006-205ENST00000440711 GRIN2AQ12879 1464 aa15.98■□□□□ 0.15
LINC01006-205ENST00000440711 ARAP1Q96P48 1450 aa15.97■□□□□ 0.15
LINC01006-205ENST00000440711 IGF1RP08069 1367 aa15.95■□□□□ 0.14
LINC01006-205ENST00000440711 NUP160Q12769 1436 aa15.94■□□□□ 0.14
LINC01006-205ENST00000440711 KIF27Q86VH2 1401 aa15.94■□□□□ 0.14
LINC01006-205ENST00000440711 ILDR1Q86SU0 546 aaPredicted RBP15.93■□□□□ 0.14
LINC01006-205ENST00000440711 JPH4Q96JJ6 628 aa15.92■□□□□ 0.14
LINC01006-205ENST00000440711 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
LINC01006-205ENST00000440711 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
LINC01006-205ENST00000440711 CARMIL1Q5VZK9 1371 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms