RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 NISCHQ9Y2I1 1504 aa64.64■■■■■ 7.94
CGREF1-207ENST00000440612 CCDC180Q9P1Z9 1646 aa56.54■■■■■ 6.64
CGREF1-207ENST00000440612 ZCCHC6Q5VYS8 1495 aaKnown RBP54.23■■■■■ 6.27
CGREF1-207ENST00000440612 ABCC9O60706 1549 aa53.83■■■■■ 6.21
CGREF1-207ENST00000440612 DCAF1Q9Y4B6 1507 aa53.48■■■■■ 6.15
CGREF1-207ENST00000440612 DCAF8L2P0C7V8 631 aa53.31■■■■■ 6.13
CGREF1-207ENST00000440612 MYO15BQ96JP2 1530 aa53.03■■■■■ 6.08
CGREF1-207ENST00000440612 NACADO15069 1562 aa52.77■■■■■ 6.04
CGREF1-207ENST00000440612 RB1CC1Q8TDY2 1594 aa52.38■■■■■ 5.98
CGREF1-207ENST00000440612 SHROOM4Q9ULL8 1493 aa52.28■■■■■ 5.96
CGREF1-207ENST00000440612 SCRIBQ14160 1630 aa51.88■■■■■ 5.9
CGREF1-207ENST00000440612 UNC13AQ9UPW8 1703 aa51.33■■■■■ 5.81
CGREF1-207ENST00000440612 BICRAQ9NZM4 1560 aa50.94■■■■■ 5.74
CGREF1-207ENST00000440612 PABPN1Q86U42 306 aaKnown RBP eCLIP50.68■■■■■ 5.7
CGREF1-207ENST00000440612 CECR2Q9BXF3 1484 aa50.29■■■■■ 5.64
CGREF1-207ENST00000440612 SUPT5HO00267 1087 aaKnown RBP50.04■■■■■ 5.6
CGREF1-207ENST00000440612 RSF1Q96T23 1441 aaPredicted RBP49.99■■■■■ 5.59
CGREF1-207ENST00000440612 MROH2BQ7Z745 1585 aa49.93■■■■■ 5.58
CGREF1-207ENST00000440612 BAZ1AQ9NRL2 1556 aaPredicted RBP49.9■■■■■ 5.58
CGREF1-207ENST00000440612 SMARCA4P51532 1647 aa49.76■■■■■ 5.56
CGREF1-207ENST00000440612 WIZO95785 1651 aa49.45■■■■■ 5.51
CGREF1-207ENST00000440612 EIF4G1Q04637 1599 aaKnown RBP49.37■■■■■ 5.49
CGREF1-207ENST00000440612 PEG3Q9GZU2 1588 aa49.24■■■■■ 5.47
CGREF1-207ENST00000440612 ATAD2BQ9ULI0 1458 aa49.09■■■■■ 5.45
CGREF1-207ENST00000440612 SMARCA2P51531 1590 aa48.98■■■■■ 5.43
CGREF1-207ENST00000440612 TOP2AP11388 1531 aaKnown RBP48.94■■■■■ 5.42
CGREF1-207ENST00000440612 NCAPD3P42695 1498 aa48.76■■■■■ 5.4
CGREF1-207ENST00000440612 CC2D2AQ9P2K1 1620 aa48.73■■■■■ 5.39
CGREF1-207ENST00000440612 BAZ1BQ9UIG0 1483 aaKnown RBP48.71■■■■■ 5.39
CGREF1-207ENST00000440612 HMGXB3Q12766 1538 aa48.62■■■■■ 5.37
CGREF1-207ENST00000440612 CCDC88BA6NC98 1476 aa48.45■■■■■ 5.35
CGREF1-207ENST00000440612 DNAJC5BQ9UF47 199 aa48■■■■■ 5.27
CGREF1-207ENST00000440612 CHIC1Q5VXU3 224 aa47.78■■■■■ 5.24
CGREF1-207ENST00000440612 CFTRP13569 1480 aa47.55■■■■■ 5.2
CGREF1-207ENST00000440612 CADPSQ9ULU8 1353 aa47.44■■■■■ 5.18
CGREF1-207ENST00000440612 ABCC8Q09428 1581 aa47.25■■■■■ 5.15
CGREF1-207ENST00000440612 NESP48681 1621 aa47.17■■■■■ 5.14
CGREF1-207ENST00000440612 PRDM2Q13029 1718 aa47.16■■■■■ 5.14
CGREF1-207ENST00000440612 LAMC3Q9Y6N6 1575 aa47.11■■■■■ 5.13
CGREF1-207ENST00000440612 TRIM41Q8WV44 630 aa47.1■■■■■ 5.13
CGREF1-207ENST00000440612 WRNQ14191 1432 aaPredicted RBP eCLIP46.99■■■■■ 5.11
CGREF1-207ENST00000440612 FANCD2Q9BXW9 1451 aa46.89■■■■■ 5.1
CGREF1-207ENST00000440612 SYNJ1O43426 1573 aa46.86■■■■■ 5.09
CGREF1-207ENST00000440612 PDS5BQ9NTI5 1447 aa46.73■■■■■ 5.07
CGREF1-207ENST00000440612 CUX1P39880 1505 aa46.71■■■■■ 5.07
CGREF1-207ENST00000440612 TOP2BQ02880 1626 aa46.7■■■■■ 5.07
CGREF1-207ENST00000440612 BIVM-ERCC5R4GMW8 1640 aa46.65■■■■■ 5.06
CGREF1-207ENST00000440612 CEP164Q9UPV0 1460 aa46.6■■■■■ 5.05
CGREF1-207ENST00000440612 KIF21AQ7Z4S6 1674 aa46.54■■■■■ 5.04
CGREF1-207ENST00000440612 DNMBPQ6XZF7 1577 aa46.39■■■■■ 5.02
CGREF1-207ENST00000440612 URB2Q14146 1524 aaKnown RBP46.38■■■■■ 5.01
CGREF1-207ENST00000440612 TOPBP1Q92547 1522 aa46.35■■■■■ 5.01
CGREF1-207ENST00000440612 SOGA1O94964 1423 aa46.31■■■■■ 5
CGREF1-207ENST00000440612 FGD5Q6ZNL6 1462 aa46.23■■■■■ 4.99
CGREF1-207ENST00000440612 FAM9AQ8IZU1 332 aaPredicted RBP46.2■■■■■ 4.99
CGREF1-207ENST00000440612 MRC2Q9UBG0 1479 aa46.19■■■■■ 4.98
CGREF1-207ENST00000440612 RUSC2Q8N2Y8 1516 aa46.18■■■■■ 4.98
CGREF1-207ENST00000440612 ERCC6Q03468 1493 aa46.12■■■■■ 4.97
CGREF1-207ENST00000440612 POLA1P09884 1462 aaPredicted RBP46.1■■■■■ 4.97
CGREF1-207ENST00000440612 EEA1Q15075 1411 aa46.06■■■■■ 4.96
CGREF1-207ENST00000440612 WDR62O43379 1518 aa46.01■■■■■ 4.96
CGREF1-207ENST00000440612 THOC2Q8NI27 1593 aaKnown RBP45.97■■■■■ 4.95
CGREF1-207ENST00000440612 RAD54L2Q9Y4B4 1467 aa45.93■■■■■ 4.94
CGREF1-207ENST00000440612 LOC105371045A0A1W2PR82 267 aa45.9■■■■■ 4.94
CGREF1-207ENST00000440612 CSRNP3Q8WYN3 585 aa45.86■■■■■ 4.93
CGREF1-207ENST00000440612 ABCA10Q8WWZ4 1543 aa45.84■■■■■ 4.93
CGREF1-207ENST00000440612 KIF27Q86VH2 1401 aa45.83■■■■■ 4.93
CGREF1-207ENST00000440612 CUX2O14529 1486 aa45.82■■■■■ 4.92
CGREF1-207ENST00000440612 WDR97A6NE52 1622 aa45.74■■■■■ 4.91
CGREF1-207ENST00000440612 TARBP1Q13395 1621 aaKnown RBP45.73■■■■■ 4.91
CGREF1-207ENST00000440612 IFT140Q96RY7 1462 aa45.55■■■■■ 4.88
CGREF1-207ENST00000440612 IGF1RP08069 1367 aa45.55■■■■■ 4.88
CGREF1-207ENST00000440612 KIF21BO75037 1637 aa45.52■■■■■ 4.88
CGREF1-207ENST00000440612 ABCA5Q8WWZ7 1642 aa45.51■■■■■ 4.88
CGREF1-207ENST00000440612 TDRD9Q8NDG6 1382 aaKnown RBP45.51■■■■■ 4.88
CGREF1-207ENST00000440612 EHMT2Q96KQ7 1210 aa45.5■■■■■ 4.88
CGREF1-207ENST00000440612 PRXQ9BXM0 1461 aa45.5■■■■■ 4.87
CGREF1-207ENST00000440612 GOLGA3Q08378 1498 aa45.4■■■■■ 4.86
CGREF1-207ENST00000440612 GAPVD1Q14C86 1478 aa45.39■■■■■ 4.86
CGREF1-207ENST00000440612 RAPGEF2Q9Y4G8 1499 aa45.37■■■■■ 4.85
CGREF1-207ENST00000440612 ZNF608Q9ULD9 1512 aaPredicted RBP45.36■■■■■ 4.85
CGREF1-207ENST00000440612 AQRO60306 1485 aaKnown RBP eCLIP45.31■■■■■ 4.84
CGREF1-207ENST00000440612 ERICH3Q5RHP9 1530 aa45.31■■■■■ 4.84
CGREF1-207ENST00000440612 CARMIL1Q5VZK9 1371 aa45.25■■■■■ 4.83
CGREF1-207ENST00000440612 TNIKQ9UKE5 1360 aa45.21■■■■■ 4.83
CGREF1-207ENST00000440612 CUL7Q14999 1698 aa45.15■■■■■ 4.82
CGREF1-207ENST00000440612 EIF4G3O43432 1585 aaKnown RBP45.15■■■■■ 4.82
CGREF1-207ENST00000440612 PBRM1Q86U86 1689 aa45.14■■■■■ 4.82
CGREF1-207ENST00000440612 UBTFP17480 764 aaKnown RBP45.13■■■■■ 4.82
CGREF1-207ENST00000440612 GRIN2BQ13224 1484 aa45.11■■■■■ 4.81
CGREF1-207ENST00000440612 ADAMTS12P58397 1594 aa44.93■■■■■ 4.78
CGREF1-207ENST00000440612 FHAD1B1AJZ9 1412 aa44.91■■■■■ 4.78
CGREF1-207ENST00000440612 CEP162Q5TB80 1403 aa44.91■■■■■ 4.78
CGREF1-207ENST00000440612 SNAPC4Q5SXM2 1469 aa44.87■■■■■ 4.77
CGREF1-207ENST00000440612 MAGI1Q96QZ7 1491 aaPredicted RBP44.79■■■■■ 4.76
CGREF1-207ENST00000440612 CLIP1P30622 1438 aa44.66■■■■■ 4.74
CGREF1-207ENST00000440612 SYNJ2O15056 1496 aa44.62■■■■■ 4.73
CGREF1-207ENST00000440612 GRIN2AQ12879 1464 aa44.58■■■■■ 4.73
CGREF1-207ENST00000440612 CTTNBP2Q8WZ74 1663 aa44.56■■■■■ 4.72
CGREF1-207ENST00000440612 RANGAP1P46060 587 aaPredicted RBP44.5■■■■■ 4.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms