RNA–Protein interactions for RNA: ENST00000440425.5

SMTN-211, Transcript of smoothelin, humanhuman

TSL 4

Gene SMTN, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-211ENST00000440425 NISCHQ9Y2I1 1504 aa42.46■■■■■ 4.39
SMTN-211ENST00000440425 CCDC180Q9P1Z9 1646 aa37.59■■■■□ 3.61
SMTN-211ENST00000440425 ABCC9O60706 1549 aa36.44■■■■□ 3.42
SMTN-211ENST00000440425 ZCCHC6Q5VYS8 1495 aaKnown RBP35.41■■■■□ 3.26
SMTN-211ENST00000440425 DCAF8L2P0C7V8 631 aa35.38■■■■□ 3.25
SMTN-211ENST00000440425 NACADO15069 1562 aa35.28■■■■□ 3.24
SMTN-211ENST00000440425 RB1CC1Q8TDY2 1594 aa35.23■■■■□ 3.23
SMTN-211ENST00000440425 MYO15BQ96JP2 1530 aa35.18■■■■□ 3.22
SMTN-211ENST00000440425 DCAF1Q9Y4B6 1507 aa35.16■■■■□ 3.22
SMTN-211ENST00000440425 UNC13AQ9UPW8 1703 aa34.41■■■■□ 3.1
SMTN-211ENST00000440425 SCRIBQ14160 1630 aa34.3■■■■□ 3.08
SMTN-211ENST00000440425 DNAJC5BQ9UF47 199 aa34.13■■■■□ 3.05
SMTN-211ENST00000440425 PABPN1Q86U42 306 aaKnown RBP eCLIP34.12■■■■□ 3.05
SMTN-211ENST00000440425 BICRAQ9NZM4 1560 aa34.11■■■■□ 3.05
SMTN-211ENST00000440425 SHROOM4Q9ULL8 1493 aa33.82■■■■□ 3
SMTN-211ENST00000440425 EIF4G1Q04637 1599 aaKnown RBP33.2■■■□□ 2.91
SMTN-211ENST00000440425 CECR2Q9BXF3 1484 aa33.01■■■□□ 2.88
SMTN-211ENST00000440425 CC2D2AQ9P2K1 1620 aa32.99■■■□□ 2.87
SMTN-211ENST00000440425 BAZ1AQ9NRL2 1556 aaPredicted RBP32.89■■■□□ 2.86
SMTN-211ENST00000440425 SMARCA4P51532 1647 aa32.86■■■□□ 2.85
SMTN-211ENST00000440425 MROH2BQ7Z745 1585 aa32.7■■■□□ 2.83
SMTN-211ENST00000440425 ATAD2BQ9ULI0 1458 aa32.6■■■□□ 2.81
SMTN-211ENST00000440425 SMARCA2P51531 1590 aa32.59■■■□□ 2.81
SMTN-211ENST00000440425 NCAPD3P42695 1498 aa32.54■■■□□ 2.8
SMTN-211ENST00000440425 PEG3Q9GZU2 1588 aa32.53■■■□□ 2.8
SMTN-211ENST00000440425 RSF1Q96T23 1441 aaPredicted RBP32.47■■■□□ 2.79
SMTN-211ENST00000440425 HMGXB3Q12766 1538 aa32.4■■■□□ 2.78
SMTN-211ENST00000440425 WIZO95785 1651 aa32.38■■■□□ 2.77
SMTN-211ENST00000440425 BAZ1BQ9UIG0 1483 aaKnown RBP32.35■■■□□ 2.77
SMTN-211ENST00000440425 TOP2AP11388 1531 aaKnown RBP32.05■■■□□ 2.72
SMTN-211ENST00000440425 SUPT5HO00267 1087 aaKnown RBP31.95■■■□□ 2.71
SMTN-211ENST00000440425 CCDC88BA6NC98 1476 aa31.69■■■□□ 2.66
SMTN-211ENST00000440425 LAMC3Q9Y6N6 1575 aa31.63■■■□□ 2.65
SMTN-211ENST00000440425 NESP48681 1621 aa31.62■■■□□ 2.65
SMTN-211ENST00000440425 CADPSQ9ULU8 1353 aa31.62■■■□□ 2.65
SMTN-211ENST00000440425 CFTRP13569 1480 aa31.49■■■□□ 2.63
SMTN-211ENST00000440425 PDS5BQ9NTI5 1447 aa31.42■■■□□ 2.62
SMTN-211ENST00000440425 ERCC6Q03468 1493 aa31.4■■■□□ 2.62
SMTN-211ENST00000440425 PRDM2Q13029 1718 aa31.29■■■□□ 2.6
SMTN-211ENST00000440425 KIF21AQ7Z4S6 1674 aa31.26■■■□□ 2.6
SMTN-211ENST00000440425 DNAJC5Q9H3Z4 198 aa31.24■■■□□ 2.59
SMTN-211ENST00000440425 FANCD2Q9BXW9 1451 aa31.24■■■□□ 2.59
SMTN-211ENST00000440425 CUX2O14529 1486 aa31.22■■■□□ 2.59
SMTN-211ENST00000440425 CEP164Q9UPV0 1460 aa31.17■■■□□ 2.58
SMTN-211ENST00000440425 THOC2Q8NI27 1593 aaKnown RBP31.06■■■□□ 2.56
SMTN-211ENST00000440425 MRC2Q9UBG0 1479 aa31.05■■■□□ 2.56
SMTN-211ENST00000440425 WDR62O43379 1518 aa30.93■■■□□ 2.54
SMTN-211ENST00000440425 URB2Q14146 1524 aaKnown RBP30.88■■■□□ 2.53
SMTN-211ENST00000440425 ABCC8Q09428 1581 aa30.84■■■□□ 2.53
SMTN-211ENST00000440425 TOPBP1Q92547 1522 aa30.78■■■□□ 2.52
SMTN-211ENST00000440425 DNMBPQ6XZF7 1577 aa30.77■■■□□ 2.52
SMTN-211ENST00000440425 CUX1P39880 1505 aa30.66■■■□□ 2.5
SMTN-211ENST00000440425 WRNQ14191 1432 aaPredicted RBP eCLIP30.62■■■□□ 2.49
SMTN-211ENST00000440425 POLA1P09884 1462 aaPredicted RBP30.53■■■□□ 2.48
SMTN-211ENST00000440425 FGD5Q6ZNL6 1462 aa30.51■■■□□ 2.48
SMTN-211ENST00000440425 IFT140Q96RY7 1462 aa30.51■■■□□ 2.48
SMTN-211ENST00000440425 TOP2BQ02880 1626 aa30.51■■■□□ 2.47
SMTN-211ENST00000440425 BIVM-ERCC5R4GMW8 1640 aa30.5■■■□□ 2.47
SMTN-211ENST00000440425 SYNJ1O43426 1573 aa30.49■■■□□ 2.47
SMTN-211ENST00000440425 SOGA1O94964 1423 aa30.45■■■□□ 2.46
SMTN-211ENST00000440425 TARBP1Q13395 1621 aaKnown RBP30.4■■■□□ 2.46
SMTN-211ENST00000440425 RAD54L2Q9Y4B4 1467 aa30.39■■■□□ 2.46
SMTN-211ENST00000440425 ZNF608Q9ULD9 1512 aaPredicted RBP30.31■■■□□ 2.44
SMTN-211ENST00000440425 ABCA10Q8WWZ4 1543 aa30.24■■■□□ 2.43
SMTN-211ENST00000440425 WDR97A6NE52 1622 aa30.22■■■□□ 2.43
SMTN-211ENST00000440425 EIF4G3O43432 1585 aaKnown RBP30.21■■■□□ 2.43
SMTN-211ENST00000440425 AQRO60306 1485 aaKnown RBP eCLIP30.21■■■□□ 2.431e-7■■■□□ 18.8
SMTN-211ENST00000440425 TDRD9Q8NDG6 1382 aaKnown RBP30.21■■■□□ 2.43
SMTN-211ENST00000440425 TRIM41Q8WV44 630 aa30.19■■■□□ 2.42
SMTN-211ENST00000440425 GAPVD1Q14C86 1478 aa30.09■■■□□ 2.41
SMTN-211ENST00000440425 ABCA5Q8WWZ7 1642 aa30.07■■■□□ 2.4
SMTN-211ENST00000440425 GRIN2BQ13224 1484 aa30.04■■■□□ 2.4
SMTN-211ENST00000440425 CHIC1Q5VXU3 224 aa30.01■■■□□ 2.39
SMTN-211ENST00000440425 PBRM1Q86U86 1689 aa29.99■■■□□ 2.39
SMTN-211ENST00000440425 KIF27Q86VH2 1401 aa29.97■■■□□ 2.39
SMTN-211ENST00000440425 SNAPC4Q5SXM2 1469 aa29.93■■■□□ 2.38
SMTN-211ENST00000440425 MAGI1Q96QZ7 1491 aaPredicted RBP29.92■■■□□ 2.38
SMTN-211ENST00000440425 ERICH3Q5RHP9 1530 aa29.9■■■□□ 2.38
SMTN-211ENST00000440425 OSCARQ8IYS5 282 aa29.82■■■□□ 2.36
SMTN-211ENST00000440425 FBLN2P98095 1184 aa29.81■■■□□ 2.36
SMTN-211ENST00000440425 CHMP7Q8WUX9 453 aaPredicted RBP29.8■■■□□ 2.36
SMTN-211ENST00000440425 SYNJ2O15056 1496 aa29.8■■■□□ 2.36
SMTN-211ENST00000440425 IGF1RP08069 1367 aa29.79■■■□□ 2.36
SMTN-211ENST00000440425 CHD1O14646 1710 aa29.77■■■□□ 2.36
SMTN-211ENST00000440425 RUSC2Q8N2Y8 1516 aa29.76■■■□□ 2.36
SMTN-211ENST00000440425 FHAD1B1AJZ9 1412 aa29.76■■■□□ 2.35
SMTN-211ENST00000440425 ADAMTS12P58397 1594 aa29.76■■■□□ 2.35
SMTN-211ENST00000440425 CUL7Q14999 1698 aa29.69■■■□□ 2.34
SMTN-211ENST00000440425 EEA1Q15075 1411 aa29.64■■■□□ 2.34
SMTN-211ENST00000440425 GRIN2AQ12879 1464 aa29.64■■■□□ 2.34
SMTN-211ENST00000440425 CARMIL1Q5VZK9 1371 aa29.64■■■□□ 2.33
SMTN-211ENST00000440425 CSRNP3Q8WYN3 585 aa29.56■■■□□ 2.32
SMTN-211ENST00000440425 FAM9AQ8IZU1 332 aaPredicted RBP29.51■■■□□ 2.31
SMTN-211ENST00000440425 RAPGEF2Q9Y4G8 1499 aa29.49■■■□□ 2.31
SMTN-211ENST00000440425 NUP160Q12769 1436 aa29.49■■■□□ 2.31
SMTN-211ENST00000440425 PRXQ9BXM0 1461 aa29.46■■■□□ 2.31
SMTN-211ENST00000440425 CEP170Q5SW79 1584 aa29.46■■■□□ 2.31
SMTN-211ENST00000440425 CLASP1Q7Z460 1538 aa29.45■■■□□ 2.3
SMTN-211ENST00000440425 RIMBP3CA6NJZ7 1639 aa29.41■■■□□ 2.3
SMTN-211ENST00000440425 RIMBP3BA6NNM3 1639 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms