RNA–Protein interactions for RNA: ENST00000440313.2

LRTOMT-209, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-209ENST00000440313 NISCHQ9Y2I1 1504 aa16.62■□□□□ 0.25
LRTOMT-209ENST00000440313 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
LRTOMT-209ENST00000440313 ABCC9O60706 1549 aa14.72□□□□□ -0.05
LRTOMT-209ENST00000440313 DCAF8L2P0C7V8 631 aa14.09□□□□□ -0.15
LRTOMT-209ENST00000440313 RB1CC1Q8TDY2 1594 aa14.08□□□□□ -0.16
LRTOMT-209ENST00000440313 NACADO15069 1562 aa14.03□□□□□ -0.16
LRTOMT-209ENST00000440313 DNAJC5BQ9UF47 199 aa14.02□□□□□ -0.17
LRTOMT-209ENST00000440313 MYO15BQ96JP2 1530 aa13.88□□□□□ -0.19
LRTOMT-209ENST00000440313 PABPN1Q86U42 306 aaKnown RBP eCLIP13.79□□□□□ -0.2
LRTOMT-209ENST00000440313 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
LRTOMT-209ENST00000440313 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
LRTOMT-209ENST00000440313 UNC13AQ9UPW8 1703 aa13.68□□□□□ -0.22
LRTOMT-209ENST00000440313 BICRAQ9NZM4 1560 aa13.61□□□□□ -0.23
LRTOMT-209ENST00000440313 SCRIBQ14160 1630 aa13.51□□□□□ -0.25
LRTOMT-209ENST00000440313 SHROOM4Q9ULL8 1493 aa13.49□□□□□ -0.25
LRTOMT-209ENST00000440313 EIF4G1Q04637 1599 aaKnown RBP13.29□□□□□ -0.28
LRTOMT-209ENST00000440313 CC2D2AQ9P2K1 1620 aa13.29□□□□□ -0.28
LRTOMT-209ENST00000440313 CECR2Q9BXF3 1484 aa13.27□□□□□ -0.29
LRTOMT-209ENST00000440313 DNAJC5Q9H3Z4 198 aa13.18□□□□□ -0.3
LRTOMT-209ENST00000440313 NCAPD3P42695 1498 aa12.96□□□□□ -0.34
LRTOMT-209ENST00000440313 ATAD2BQ9ULI0 1458 aa12.92□□□□□ -0.34
LRTOMT-209ENST00000440313 SMARCA4P51532 1647 aa12.91□□□□□ -0.34
LRTOMT-209ENST00000440313 SMARCA2P51531 1590 aa12.9□□□□□ -0.34
LRTOMT-209ENST00000440313 BAZ1AQ9NRL2 1556 aaPredicted RBP12.9□□□□□ -0.35
LRTOMT-209ENST00000440313 HMGXB3Q12766 1538 aa12.83□□□□□ -0.35
LRTOMT-209ENST00000440313 BAZ1BQ9UIG0 1483 aaKnown RBP12.81□□□□□ -0.36
LRTOMT-209ENST00000440313 MROH2BQ7Z745 1585 aa12.79□□□□□ -0.36
LRTOMT-209ENST00000440313 PEG3Q9GZU2 1588 aa12.78□□□□□ -0.36
LRTOMT-209ENST00000440313 ERCC6Q03468 1493 aa12.74□□□□□ -0.37
LRTOMT-209ENST00000440313 NESP48681 1621 aa12.66□□□□□ -0.38
LRTOMT-209ENST00000440313 CUX2O14529 1486 aa12.65□□□□□ -0.38
LRTOMT-209ENST00000440313 WIZO95785 1651 aa12.63□□□□□ -0.39
LRTOMT-209ENST00000440313 LAMC3Q9Y6N6 1575 aa12.61□□□□□ -0.39
LRTOMT-209ENST00000440313 RSF1Q96T23 1441 aaPredicted RBP12.61□□□□□ -0.39
LRTOMT-209ENST00000440313 PDS5BQ9NTI5 1447 aa12.6□□□□□ -0.39
LRTOMT-209ENST00000440313 CADPSQ9ULU8 1353 aa12.59□□□□□ -0.39
LRTOMT-209ENST00000440313 TRIM41Q8WV44 630 aa12.5□□□□□ -0.41
LRTOMT-209ENST00000440313 TOP2AP11388 1531 aaKnown RBP12.5□□□□□ -0.41
LRTOMT-209ENST00000440313 KIF21AQ7Z4S6 1674 aa12.48□□□□□ -0.41
LRTOMT-209ENST00000440313 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
LRTOMT-209ENST00000440313 CFTRP13569 1480 aa12.45□□□□□ -0.42
LRTOMT-209ENST00000440313 MRC2Q9UBG0 1479 aa12.43□□□□□ -0.42
LRTOMT-209ENST00000440313 FANCD2Q9BXW9 1451 aa12.41□□□□□ -0.42
LRTOMT-209ENST00000440313 CEP164Q9UPV0 1460 aa12.41□□□□□ -0.42
LRTOMT-209ENST00000440313 CCDC88BA6NC98 1476 aa12.39□□□□□ -0.43
LRTOMT-209ENST00000440313 WDR62O43379 1518 aa12.37□□□□□ -0.43
LRTOMT-209ENST00000440313 URB2Q14146 1524 aaKnown RBP12.27□□□□□ -0.44
LRTOMT-209ENST00000440313 PRDM2Q13029 1718 aa12.26□□□□□ -0.45
LRTOMT-209ENST00000440313 SUPT5HO00267 1087 aaKnown RBP12.23□□□□□ -0.45
LRTOMT-209ENST00000440313 ABCC8Q09428 1581 aa12.22□□□□□ -0.45
LRTOMT-209ENST00000440313 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
LRTOMT-209ENST00000440313 OSCARQ8IYS5 282 aa12.18□□□□□ -0.46
LRTOMT-209ENST00000440313 IFT140Q96RY7 1462 aa12.18□□□□□ -0.46
LRTOMT-209ENST00000440313 DNMBPQ6XZF7 1577 aa12.14□□□□□ -0.47
LRTOMT-209ENST00000440313 ZNF608Q9ULD9 1512 aaPredicted RBP12.11□□□□□ -0.47
LRTOMT-209ENST00000440313 POLA1P09884 1462 aaPredicted RBP12.07□□□□□ -0.48
LRTOMT-209ENST00000440313 SOGA1O94964 1423 aa12.06□□□□□ -0.48
LRTOMT-209ENST00000440313 AQRO60306 1485 aaKnown RBP eCLIP12.05□□□□□ -0.48
LRTOMT-209ENST00000440313 TARBP1Q13395 1621 aaKnown RBP12.04□□□□□ -0.48
LRTOMT-209ENST00000440313 RAD54L2Q9Y4B4 1467 aa12.02□□□□□ -0.48
LRTOMT-209ENST00000440313 FBLN2P98095 1184 aa12.02□□□□□ -0.49
LRTOMT-209ENST00000440313 EIF4G3O43432 1585 aaKnown RBP12.01□□□□□ -0.49
LRTOMT-209ENST00000440313 TDRD9Q8NDG6 1382 aaKnown RBP12.01□□□□□ -0.49
LRTOMT-209ENST00000440313 FGD5Q6ZNL6 1462 aa12.01□□□□□ -0.49
LRTOMT-209ENST00000440313 CUX1P39880 1505 aa12.01□□□□□ -0.49
LRTOMT-209ENST00000440313 CHMP7Q8WUX9 453 aaPredicted RBP11.96□□□□□ -0.49
LRTOMT-209ENST00000440313 WDR97A6NE52 1622 aa11.95□□□□□ -0.5
LRTOMT-209ENST00000440313 GRIN2BQ13224 1484 aa11.92□□□□□ -0.5
LRTOMT-209ENST00000440313 WRNQ14191 1432 aaPredicted RBP eCLIP11.92□□□□□ -0.5
LRTOMT-209ENST00000440313 GAPVD1Q14C86 1478 aa11.9□□□□□ -0.5
LRTOMT-209ENST00000440313 SNAPC4Q5SXM2 1469 aa11.9□□□□□ -0.5
LRTOMT-209ENST00000440313 MAGI1Q96QZ7 1491 aaPredicted RBP11.9□□□□□ -0.5
LRTOMT-209ENST00000440313 CHD1O14646 1710 aa11.9□□□□□ -0.5
LRTOMT-209ENST00000440313 ABCA10Q8WWZ4 1543 aa11.9□□□□□ -0.5
LRTOMT-209ENST00000440313 TRHP20396 242 aaPredicted RBP11.89□□□□□ -0.51
LRTOMT-209ENST00000440313 RIMBP3CA6NJZ7 1639 aa11.88□□□□□ -0.51
LRTOMT-209ENST00000440313 RIMBP3BA6NNM3 1639 aa11.88□□□□□ -0.51
LRTOMT-209ENST00000440313 RIMBP3Q9UFD9 1639 aa11.88□□□□□ -0.51
LRTOMT-209ENST00000440313 ARHGEF11O15085 1522 aa11.87□□□□□ -0.51
LRTOMT-209ENST00000440313 CYB5RLQ6IPT4 315 aa11.87□□□□□ -0.51
LRTOMT-209ENST00000440313 TOP2BQ02880 1626 aa11.86□□□□□ -0.51
LRTOMT-209ENST00000440313 AEBP2Q6ZN18 517 aaPredicted RBP11.86□□□□□ -0.51
LRTOMT-209ENST00000440313 SYNJ2O15056 1496 aa11.86□□□□□ -0.51
LRTOMT-209ENST00000440313 BIVM-ERCC5R4GMW8 1640 aa11.83□□□□□ -0.52
LRTOMT-209ENST00000440313 SYNJ1O43426 1573 aa11.83□□□□□ -0.52
LRTOMT-209ENST00000440313 ABCA5Q8WWZ7 1642 aa11.82□□□□□ -0.52
LRTOMT-209ENST00000440313 PBRM1Q86U86 1689 aa11.81□□□□□ -0.52
LRTOMT-209ENST00000440313 CLASP1Q7Z460 1538 aa11.77□□□□□ -0.52
LRTOMT-209ENST00000440313 FHAD1B1AJZ9 1412 aa11.77□□□□□ -0.53
LRTOMT-209ENST00000440313 ARAP1Q96P48 1450 aa11.76□□□□□ -0.53
LRTOMT-209ENST00000440313 GRIN2AQ12879 1464 aa11.75□□□□□ -0.53
LRTOMT-209ENST00000440313 ERICH3Q5RHP9 1530 aa11.75□□□□□ -0.53
LRTOMT-209ENST00000440313 ADAMTS12P58397 1594 aa11.71□□□□□ -0.53
LRTOMT-209ENST00000440313 NUP160Q12769 1436 aa11.7□□□□□ -0.54
LRTOMT-209ENST00000440313 KIF27Q86VH2 1401 aa11.69□□□□□ -0.54
LRTOMT-209ENST00000440313 IGF1RP08069 1367 aa11.67□□□□□ -0.54
LRTOMT-209ENST00000440313 JPH4Q96JJ6 628 aa11.67□□□□□ -0.54
LRTOMT-209ENST00000440313 CEP170Q5SW79 1584 aa11.67□□□□□ -0.54
LRTOMT-209ENST00000440313 PRG4Q92954 1404 aaPredicted RBP11.61□□□□□ -0.55
LRTOMT-209ENST00000440313 CARMIL1Q5VZK9 1371 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms