RNA–Protein interactions for RNA: ENST00000440160.1

LINC00457-202, long intergenic non-protein coding RNA 457, humanhuman

TSL 2

Gene LINC00457, Length 394 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00457-202ENST00000440160 NISCHQ9Y2I1 1504 aa17.89■□□□□ 0.45
LINC00457-202ENST00000440160 CCDC180Q9P1Z9 1646 aa15.95■□□□□ 0.14
LINC00457-202ENST00000440160 ABCC9O60706 1549 aa15.77■□□□□ 0.11
LINC00457-202ENST00000440160 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
LINC00457-202ENST00000440160 NACADO15069 1562 aa14.94□□□□□ -0.02
LINC00457-202ENST00000440160 DCAF8L2P0C7V8 631 aa14.94□□□□□ -0.02
LINC00457-202ENST00000440160 ZCCHC6Q5VYS8 1495 aaKnown RBP14.94□□□□□ -0.02
LINC00457-202ENST00000440160 MYO15BQ96JP2 1530 aa14.86□□□□□ -0.03
LINC00457-202ENST00000440160 DCAF1Q9Y4B6 1507 aa14.81□□□□□ -0.04
LINC00457-202ENST00000440160 DNAJC5BQ9UF47 199 aa14.76□□□□□ -0.05
LINC00457-202ENST00000440160 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
LINC00457-202ENST00000440160 UNC13AQ9UPW8 1703 aa14.66□□□□□ -0.06
LINC00457-202ENST00000440160 SCRIBQ14160 1630 aa14.55□□□□□ -0.08
LINC00457-202ENST00000440160 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
LINC00457-202ENST00000440160 SHROOM4Q9ULL8 1493 aa14.37□□□□□ -0.11
LINC00457-202ENST00000440160 CC2D2AQ9P2K1 1620 aa14.18□□□□□ -0.14
LINC00457-202ENST00000440160 EIF4G1Q04637 1599 aaKnown RBP14.17□□□□□ -0.14
LINC00457-202ENST00000440160 CECR2Q9BXF3 1484 aa14.16□□□□□ -0.14
LINC00457-202ENST00000440160 SMARCA4P51532 1647 aa13.9□□□□□ -0.18
LINC00457-202ENST00000440160 BAZ1AQ9NRL2 1556 aaPredicted RBP13.88□□□□□ -0.19
LINC00457-202ENST00000440160 MROH2BQ7Z745 1585 aa13.8□□□□□ -0.2
LINC00457-202ENST00000440160 ATAD2BQ9ULI0 1458 aa13.79□□□□□ -0.2
LINC00457-202ENST00000440160 SMARCA2P51531 1590 aa13.79□□□□□ -0.2
LINC00457-202ENST00000440160 PEG3Q9GZU2 1588 aa13.76□□□□□ -0.21
LINC00457-202ENST00000440160 NCAPD3P42695 1498 aa13.76□□□□□ -0.21
LINC00457-202ENST00000440160 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
LINC00457-202ENST00000440160 BAZ1BQ9UIG0 1483 aaKnown RBP13.69□□□□□ -0.22
LINC00457-202ENST00000440160 WIZO95785 1651 aa13.67□□□□□ -0.22
LINC00457-202ENST00000440160 RSF1Q96T23 1441 aaPredicted RBP13.63□□□□□ -0.23
LINC00457-202ENST00000440160 NESP48681 1621 aa13.58□□□□□ -0.24
LINC00457-202ENST00000440160 ERCC6Q03468 1493 aa13.57□□□□□ -0.24
LINC00457-202ENST00000440160 TOP2AP11388 1531 aaKnown RBP13.54□□□□□ -0.24
LINC00457-202ENST00000440160 CUX2O14529 1486 aa13.45□□□□□ -0.26
LINC00457-202ENST00000440160 LAMC3Q9Y6N6 1575 aa13.43□□□□□ -0.26
LINC00457-202ENST00000440160 DNAJC5Q9H3Z4 198 aa13.4□□□□□ -0.26
LINC00457-202ENST00000440160 CADPSQ9ULU8 1353 aa13.35□□□□□ -0.27
LINC00457-202ENST00000440160 THOC2Q8NI27 1593 aaKnown RBP13.35□□□□□ -0.27
LINC00457-202ENST00000440160 KIF21AQ7Z4S6 1674 aa13.34□□□□□ -0.27
LINC00457-202ENST00000440160 CCDC88BA6NC98 1476 aa13.33□□□□□ -0.28
LINC00457-202ENST00000440160 PDS5BQ9NTI5 1447 aa13.31□□□□□ -0.28
LINC00457-202ENST00000440160 CFTRP13569 1480 aa13.3□□□□□ -0.28
LINC00457-202ENST00000440160 SUPT5HO00267 1087 aaKnown RBP13.29□□□□□ -0.28
LINC00457-202ENST00000440160 PRDM2Q13029 1718 aa13.27□□□□□ -0.28
LINC00457-202ENST00000440160 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
LINC00457-202ENST00000440160 MRC2Q9UBG0 1479 aa13.23□□□□□ -0.29
LINC00457-202ENST00000440160 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
LINC00457-202ENST00000440160 WDR62O43379 1518 aa13.17□□□□□ -0.3
LINC00457-202ENST00000440160 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
LINC00457-202ENST00000440160 TOPBP1Q92547 1522 aa13.03□□□□□ -0.32
LINC00457-202ENST00000440160 DNMBPQ6XZF7 1577 aa13.03□□□□□ -0.32
LINC00457-202ENST00000440160 ABCC8Q09428 1581 aa13.02□□□□□ -0.33
LINC00457-202ENST00000440160 ZNF608Q9ULD9 1512 aaPredicted RBP12.95□□□□□ -0.34
LINC00457-202ENST00000440160 TRIM41Q8WV44 630 aa12.95□□□□□ -0.34
LINC00457-202ENST00000440160 CUX1P39880 1505 aa12.94□□□□□ -0.34
LINC00457-202ENST00000440160 IFT140Q96RY7 1462 aa12.94□□□□□ -0.34
LINC00457-202ENST00000440160 POLA1P09884 1462 aaPredicted RBP12.92□□□□□ -0.34
LINC00457-202ENST00000440160 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
LINC00457-202ENST00000440160 TARBP1Q13395 1621 aaKnown RBP12.9□□□□□ -0.34
LINC00457-202ENST00000440160 OSCARQ8IYS5 282 aa12.89□□□□□ -0.35
LINC00457-202ENST00000440160 BIVM-ERCC5R4GMW8 1640 aa12.88□□□□□ -0.35
LINC00457-202ENST00000440160 EIF4G3O43432 1585 aaKnown RBP12.87□□□□□ -0.35
LINC00457-202ENST00000440160 WRNQ14191 1432 aaPredicted RBP eCLIP12.87□□□□□ -0.35
LINC00457-202ENST00000440160 SYNJ1O43426 1573 aa12.86□□□□□ -0.35
LINC00457-202ENST00000440160 RAD54L2Q9Y4B4 1467 aa12.85□□□□□ -0.35
LINC00457-202ENST00000440160 TOP2BQ02880 1626 aa12.85□□□□□ -0.35
LINC00457-202ENST00000440160 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00457-202ENST00000440160 WDR97A6NE52 1622 aa12.84□□□□□ -0.35
LINC00457-202ENST00000440160 SOGA1O94964 1423 aa12.84□□□□□ -0.35
LINC00457-202ENST00000440160 TDRD9Q8NDG6 1382 aaKnown RBP12.79□□□□□ -0.36
LINC00457-202ENST00000440160 FBLN2P98095 1184 aa12.77□□□□□ -0.37
LINC00457-202ENST00000440160 ABCA10Q8WWZ4 1543 aa12.77□□□□□ -0.37
LINC00457-202ENST00000440160 ABCA5Q8WWZ7 1642 aa12.76□□□□□ -0.37
LINC00457-202ENST00000440160 PBRM1Q86U86 1689 aa12.74□□□□□ -0.37
LINC00457-202ENST00000440160 RIMBP3CA6NJZ7 1639 aa12.72□□□□□ -0.37
LINC00457-202ENST00000440160 RIMBP3BA6NNM3 1639 aa12.72□□□□□ -0.37
LINC00457-202ENST00000440160 RIMBP3Q9UFD9 1639 aa12.72□□□□□ -0.37
LINC00457-202ENST00000440160 GRIN2BQ13224 1484 aa12.71□□□□□ -0.38
LINC00457-202ENST00000440160 GAPVD1Q14C86 1478 aa12.71□□□□□ -0.38
LINC00457-202ENST00000440160 SNAPC4Q5SXM2 1469 aa12.71□□□□□ -0.38
LINC00457-202ENST00000440160 CHD1O14646 1710 aa12.71□□□□□ -0.38
LINC00457-202ENST00000440160 ARHGEF11O15085 1522 aa12.7□□□□□ -0.38
LINC00457-202ENST00000440160 MAGI1Q96QZ7 1491 aaPredicted RBP12.67□□□□□ -0.38
LINC00457-202ENST00000440160 CYB5RLQ6IPT4 315 aa12.64□□□□□ -0.39
LINC00457-202ENST00000440160 CHMP7Q8WUX9 453 aaPredicted RBP12.63□□□□□ -0.39
LINC00457-202ENST00000440160 SYNJ2O15056 1496 aa12.63□□□□□ -0.39
LINC00457-202ENST00000440160 ADAMTS12P58397 1594 aa12.63□□□□□ -0.39
LINC00457-202ENST00000440160 ERICH3Q5RHP9 1530 aa12.62□□□□□ -0.39
LINC00457-202ENST00000440160 ARAP1Q96P48 1450 aa12.61□□□□□ -0.39
LINC00457-202ENST00000440160 KIF27Q86VH2 1401 aa12.59□□□□□ -0.39
LINC00457-202ENST00000440160 CLASP1Q7Z460 1538 aa12.57□□□□□ -0.4
LINC00457-202ENST00000440160 FHAD1B1AJZ9 1412 aa12.56□□□□□ -0.4
LINC00457-202ENST00000440160 GRIN2AQ12879 1464 aa12.55□□□□□ -0.4
LINC00457-202ENST00000440160 CUL7Q14999 1698 aa12.54□□□□□ -0.4
LINC00457-202ENST00000440160 CEP170Q5SW79 1584 aa12.51□□□□□ -0.41
LINC00457-202ENST00000440160 RUSC2Q8N2Y8 1516 aa12.49□□□□□ -0.41
LINC00457-202ENST00000440160 IGF1RP08069 1367 aa12.49□□□□□ -0.41
LINC00457-202ENST00000440160 NUP160Q12769 1436 aa12.48□□□□□ -0.41
LINC00457-202ENST00000440160 TRHP20396 242 aaPredicted RBP12.48□□□□□ -0.41
LINC00457-202ENST00000440160 ERCC6L2Q5T890 1561 aa12.46□□□□□ -0.42
LINC00457-202ENST00000440160 CARMIL1Q5VZK9 1371 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms