RNA–Protein interactions for RNA: ENST00000439492.1

AP000350.2-201, humanhuman

BASIC

Gene AP000350.2, Length 1,763 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000350.2-201ENST00000439492 NISCHQ9Y2I1 1504 aa28.5■■■□□ 2.15
AP000350.2-201ENST00000439492 CCDC180Q9P1Z9 1646 aa24.93■■□□□ 1.58
AP000350.2-201ENST00000439492 ABCC9O60706 1549 aa23.97■■□□□ 1.43
AP000350.2-201ENST00000439492 ZCCHC6Q5VYS8 1495 aaKnown RBP23.87■■□□□ 1.41
AP000350.2-201ENST00000439492 DCAF8L2P0C7V8 631 aa23.68■■□□□ 1.38
AP000350.2-201ENST00000439492 DCAF1Q9Y4B6 1507 aa23.55■■□□□ 1.36
AP000350.2-201ENST00000439492 MYO15BQ96JP2 1530 aa23.42■■□□□ 1.34
AP000350.2-201ENST00000439492 NACADO15069 1562 aa23.35■■□□□ 1.33
AP000350.2-201ENST00000439492 RB1CC1Q8TDY2 1594 aa23.22■■□□□ 1.31
AP000350.2-201ENST00000439492 SHROOM4Q9ULL8 1493 aa23.02■■□□□ 1.28
AP000350.2-201ENST00000439492 SCRIBQ14160 1630 aa22.92■■□□□ 1.26
AP000350.2-201ENST00000439492 UNC13AQ9UPW8 1703 aa22.67■■□□□ 1.22
AP000350.2-201ENST00000439492 PABPN1Q86U42 306 aaKnown RBP eCLIP22.59■■□□□ 1.21
AP000350.2-201ENST00000439492 BICRAQ9NZM4 1560 aa22.56■■□□□ 1.2
AP000350.2-201ENST00000439492 CECR2Q9BXF3 1484 aa22.2■■□□□ 1.15
AP000350.2-201ENST00000439492 MROH2BQ7Z745 1585 aa22.02■■□□□ 1.11
AP000350.2-201ENST00000439492 BAZ1AQ9NRL2 1556 aaPredicted RBP22.01■■□□□ 1.11
AP000350.2-201ENST00000439492 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
AP000350.2-201ENST00000439492 SUPT5HO00267 1087 aaKnown RBP21.99■■□□□ 1.11
AP000350.2-201ENST00000439492 SMARCA4P51532 1647 aa21.95■■□□□ 1.1
AP000350.2-201ENST00000439492 EIF4G1Q04637 1599 aaKnown RBP21.9■■□□□ 1.1
AP000350.2-201ENST00000439492 WIZO95785 1651 aa21.77■■□□□ 1.08
AP000350.2-201ENST00000439492 ATAD2BQ9ULI0 1458 aa21.72■■□□□ 1.07
AP000350.2-201ENST00000439492 PEG3Q9GZU2 1588 aa21.71■■□□□ 1.07
AP000350.2-201ENST00000439492 SMARCA2P51531 1590 aa21.66■■□□□ 1.06
AP000350.2-201ENST00000439492 CC2D2AQ9P2K1 1620 aa21.66■■□□□ 1.06
AP000350.2-201ENST00000439492 NCAPD3P42695 1498 aa21.61■■□□□ 1.05
AP000350.2-201ENST00000439492 BAZ1BQ9UIG0 1483 aaKnown RBP21.56■■□□□ 1.04
AP000350.2-201ENST00000439492 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
AP000350.2-201ENST00000439492 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
AP000350.2-201ENST00000439492 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
AP000350.2-201ENST00000439492 CCDC88BA6NC98 1476 aa21.36■■□□□ 1.01
AP000350.2-201ENST00000439492 CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
AP000350.2-201ENST00000439492 CFTRP13569 1480 aa21.02■□□□□ 0.96
AP000350.2-201ENST00000439492 NESP48681 1621 aa20.95■□□□□ 0.94
AP000350.2-201ENST00000439492 CHIC1Q5VXU3 224 aa20.87■□□□□ 0.93
AP000350.2-201ENST00000439492 LAMC3Q9Y6N6 1575 aa20.87■□□□□ 0.93
AP000350.2-201ENST00000439492 FANCD2Q9BXW9 1451 aa20.78■□□□□ 0.92
AP000350.2-201ENST00000439492 ABCC8Q09428 1581 aa20.77■□□□□ 0.92
AP000350.2-201ENST00000439492 PDS5BQ9NTI5 1447 aa20.76■□□□□ 0.91
AP000350.2-201ENST00000439492 PRDM2Q13029 1718 aa20.73■□□□□ 0.91
AP000350.2-201ENST00000439492 WRNQ14191 1432 aaPredicted RBP eCLIP20.7■□□□□ 0.9
AP000350.2-201ENST00000439492 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
AP000350.2-201ENST00000439492 CEP164Q9UPV0 1460 aa20.66■□□□□ 0.9
AP000350.2-201ENST00000439492 KIF21AQ7Z4S6 1674 aa20.6■□□□□ 0.89
AP000350.2-201ENST00000439492 SYNJ1O43426 1573 aa20.6■□□□□ 0.89
AP000350.2-201ENST00000439492 CUX1P39880 1505 aa20.6■□□□□ 0.89
AP000350.2-201ENST00000439492 ERCC6Q03468 1493 aa20.58■□□□□ 0.88
AP000350.2-201ENST00000439492 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
AP000350.2-201ENST00000439492 TOP2BQ02880 1626 aa20.54■□□□□ 0.88
AP000350.2-201ENST00000439492 MRC2Q9UBG0 1479 aa20.51■□□□□ 0.87
AP000350.2-201ENST00000439492 TOPBP1Q92547 1522 aa20.5■□□□□ 0.87
AP000350.2-201ENST00000439492 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
AP000350.2-201ENST00000439492 DNMBPQ6XZF7 1577 aa20.49■□□□□ 0.87
AP000350.2-201ENST00000439492 FGD5Q6ZNL6 1462 aa20.43■□□□□ 0.86
AP000350.2-201ENST00000439492 WDR62O43379 1518 aa20.4■□□□□ 0.86
AP000350.2-201ENST00000439492 THOC2Q8NI27 1593 aaKnown RBP20.4■□□□□ 0.86
AP000350.2-201ENST00000439492 POLA1P09884 1462 aaPredicted RBP20.39■□□□□ 0.85
AP000350.2-201ENST00000439492 SOGA1O94964 1423 aa20.35■□□□□ 0.85
AP000350.2-201ENST00000439492 RAD54L2Q9Y4B4 1467 aa20.33■□□□□ 0.84
AP000350.2-201ENST00000439492 FAM9AQ8IZU1 332 aaPredicted RBP20.31■□□□□ 0.84
AP000350.2-201ENST00000439492 RUSC2Q8N2Y8 1516 aa20.29■□□□□ 0.84
AP000350.2-201ENST00000439492 CUX2O14529 1486 aa20.29■□□□□ 0.84
AP000350.2-201ENST00000439492 ABCA10Q8WWZ4 1543 aa20.24■□□□□ 0.83
AP000350.2-201ENST00000439492 TARBP1Q13395 1621 aaKnown RBP20.21■□□□□ 0.83
AP000350.2-201ENST00000439492 KIF27Q86VH2 1401 aa20.21■□□□□ 0.83
AP000350.2-201ENST00000439492 IFT140Q96RY7 1462 aa20.2■□□□□ 0.82
AP000350.2-201ENST00000439492 EEA1Q15075 1411 aa20.19■□□□□ 0.82
AP000350.2-201ENST00000439492 TDRD9Q8NDG6 1382 aaKnown RBP20.18■□□□□ 0.82
AP000350.2-201ENST00000439492 CSRNP3Q8WYN3 585 aa20.17■□□□□ 0.82
AP000350.2-201ENST00000439492 WDR97A6NE52 1622 aa20.13■□□□□ 0.81
AP000350.2-201ENST00000439492 ZNF608Q9ULD9 1512 aaPredicted RBP20.12■□□□□ 0.81
AP000350.2-201ENST00000439492 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.81
AP000350.2-201ENST00000439492 IGF1RP08069 1367 aa20.1■□□□□ 0.81
AP000350.2-201ENST00000439492 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
AP000350.2-201ENST00000439492 ABCA5Q8WWZ7 1642 aa20.07■□□□□ 0.8
AP000350.2-201ENST00000439492 LOC105371045A0A1W2PR82 267 aa20.07■□□□□ 0.8
AP000350.2-201ENST00000439492 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
AP000350.2-201ENST00000439492 PRXQ9BXM0 1461 aa19.99■□□□□ 0.79
AP000350.2-201ENST00000439492 EIF4G3O43432 1585 aaKnown RBP19.99■□□□□ 0.79
AP000350.2-201ENST00000439492 GRIN2BQ13224 1484 aa19.98■□□□□ 0.79
AP000350.2-201ENST00000439492 ERICH3Q5RHP9 1530 aa19.98■□□□□ 0.79
AP000350.2-201ENST00000439492 CARMIL1Q5VZK9 1371 aa19.98■□□□□ 0.79
AP000350.2-201ENST00000439492 RAPGEF2Q9Y4G8 1499 aa19.94■□□□□ 0.78
AP000350.2-201ENST00000439492 KIF21BO75037 1637 aa19.92■□□□□ 0.78
AP000350.2-201ENST00000439492 GOLGA3Q08378 1498 aa19.9■□□□□ 0.78
AP000350.2-201ENST00000439492 PBRM1Q86U86 1689 aa19.9■□□□□ 0.78
AP000350.2-201ENST00000439492 SNAPC4Q5SXM2 1469 aa19.89■□□□□ 0.77
AP000350.2-201ENST00000439492 CUL7Q14999 1698 aa19.87■□□□□ 0.77
AP000350.2-201ENST00000439492 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
AP000350.2-201ENST00000439492 FHAD1B1AJZ9 1412 aa19.87■□□□□ 0.77
AP000350.2-201ENST00000439492 MAGI1Q96QZ7 1491 aaPredicted RBP19.84■□□□□ 0.77
AP000350.2-201ENST00000439492 ADAMTS12P58397 1594 aa19.83■□□□□ 0.77
AP000350.2-201ENST00000439492 TNIKQ9UKE5 1360 aa19.8■□□□□ 0.76
AP000350.2-201ENST00000439492 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
AP000350.2-201ENST00000439492 SYNJ2O15056 1496 aa19.78■□□□□ 0.76
AP000350.2-201ENST00000439492 FBLN2P98095 1184 aa19.77■□□□□ 0.76
AP000350.2-201ENST00000439492 GRIN2AQ12879 1464 aa19.73■□□□□ 0.75
AP000350.2-201ENST00000439492 CEP162Q5TB80 1403 aa19.66■□□□□ 0.74
AP000350.2-201ENST00000439492 RANGAP1P46060 587 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms