RNA–Protein interactions for RNA: ENST00000438985.5

ARHGEF4-207, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 2

Gene ARHGEF4, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-207ENST00000438985 NISCHQ9Y2I1 1504 aa32.09■■■□□ 2.73
ARHGEF4-207ENST00000438985 CCDC180Q9P1Z9 1646 aa28.3■■■□□ 2.12
ARHGEF4-207ENST00000438985 ABCC9O60706 1549 aa27.11■■□□□ 1.93
ARHGEF4-207ENST00000438985 ZCCHC6Q5VYS8 1495 aaKnown RBP26.84■■□□□ 1.89
ARHGEF4-207ENST00000438985 DCAF8L2P0C7V8 631 aa26.64■■□□□ 1.85
ARHGEF4-207ENST00000438985 DCAF1Q9Y4B6 1507 aa26.59■■□□□ 1.85
ARHGEF4-207ENST00000438985 MYO15BQ96JP2 1530 aa26.5■■□□□ 1.83
ARHGEF4-207ENST00000438985 NACADO15069 1562 aa26.46■■□□□ 1.83
ARHGEF4-207ENST00000438985 RB1CC1Q8TDY2 1594 aa26.35■■□□□ 1.81
ARHGEF4-207ENST00000438985 SCRIBQ14160 1630 aa25.84■■□□□ 1.73
ARHGEF4-207ENST00000438985 UNC13AQ9UPW8 1703 aa25.81■■□□□ 1.72
ARHGEF4-207ENST00000438985 SHROOM4Q9ULL8 1493 aa25.75■■□□□ 1.71
ARHGEF4-207ENST00000438985 BICRAQ9NZM4 1560 aa25.55■■□□□ 1.68
ARHGEF4-207ENST00000438985 PABPN1Q86U42 306 aaKnown RBP eCLIP25.47■■□□□ 1.67
ARHGEF4-207ENST00000438985 CECR2Q9BXF3 1484 aa24.93■■□□□ 1.58
ARHGEF4-207ENST00000438985 BAZ1AQ9NRL2 1556 aaPredicted RBP24.83■■□□□ 1.57
ARHGEF4-207ENST00000438985 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
ARHGEF4-207ENST00000438985 SMARCA4P51532 1647 aa24.78■■□□□ 1.56
ARHGEF4-207ENST00000438985 MROH2BQ7Z745 1585 aa24.74■■□□□ 1.55
ARHGEF4-207ENST00000438985 RSF1Q96T23 1441 aaPredicted RBP24.66■■□□□ 1.54
ARHGEF4-207ENST00000438985 CC2D2AQ9P2K1 1620 aa24.58■■□□□ 1.52
ARHGEF4-207ENST00000438985 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
ARHGEF4-207ENST00000438985 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
ARHGEF4-207ENST00000438985 WIZO95785 1651 aa24.52■■□□□ 1.52
ARHGEF4-207ENST00000438985 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
ARHGEF4-207ENST00000438985 ATAD2BQ9ULI0 1458 aa24.5■■□□□ 1.51
ARHGEF4-207ENST00000438985 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
ARHGEF4-207ENST00000438985 NCAPD3P42695 1498 aa24.41■■□□□ 1.5
ARHGEF4-207ENST00000438985 HMGXB3Q12766 1538 aa24.33■■□□□ 1.49
ARHGEF4-207ENST00000438985 BAZ1BQ9UIG0 1483 aaKnown RBP24.32■■□□□ 1.48
ARHGEF4-207ENST00000438985 TOP2AP11388 1531 aaKnown RBP24.27■■□□□ 1.47
ARHGEF4-207ENST00000438985 CCDC88BA6NC98 1476 aa23.99■■□□□ 1.43
ARHGEF4-207ENST00000438985 CADPSQ9ULU8 1353 aa23.72■■□□□ 1.39
ARHGEF4-207ENST00000438985 CFTRP13569 1480 aa23.7■■□□□ 1.39
ARHGEF4-207ENST00000438985 LAMC3Q9Y6N6 1575 aa23.68■■□□□ 1.38
ARHGEF4-207ENST00000438985 NESP48681 1621 aa23.64■■□□□ 1.37
ARHGEF4-207ENST00000438985 PRDM2Q13029 1718 aa23.61■■□□□ 1.37
ARHGEF4-207ENST00000438985 PDS5BQ9NTI5 1447 aa23.48■■□□□ 1.35
ARHGEF4-207ENST00000438985 FANCD2Q9BXW9 1451 aa23.43■■□□□ 1.34
ARHGEF4-207ENST00000438985 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
ARHGEF4-207ENST00000438985 CEP164Q9UPV0 1460 aa23.35■■□□□ 1.33
ARHGEF4-207ENST00000438985 ERCC6Q03468 1493 aa23.31■■□□□ 1.32
ARHGEF4-207ENST00000438985 ABCC8Q09428 1581 aa23.3■■□□□ 1.32
ARHGEF4-207ENST00000438985 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
ARHGEF4-207ENST00000438985 MRC2Q9UBG0 1479 aa23.2■■□□□ 1.3
ARHGEF4-207ENST00000438985 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
ARHGEF4-207ENST00000438985 CUX1P39880 1505 aa23.18■■□□□ 1.3
ARHGEF4-207ENST00000438985 URB2Q14146 1524 aaKnown RBP23.18■■□□□ 1.3
ARHGEF4-207ENST00000438985 THOC2Q8NI27 1593 aaKnown RBP23.17■■□□□ 1.3
ARHGEF4-207ENST00000438985 DNMBPQ6XZF7 1577 aa23.16■■□□□ 1.3
ARHGEF4-207ENST00000438985 SYNJ1O43426 1573 aa23.15■■□□□ 1.3
ARHGEF4-207ENST00000438985 TOPBP1Q92547 1522 aa23.14■■□□□ 1.29
ARHGEF4-207ENST00000438985 TOP2BQ02880 1626 aa23.14■■□□□ 1.29
ARHGEF4-207ENST00000438985 BIVM-ERCC5R4GMW8 1640 aa23.14■■□□□ 1.29
ARHGEF4-207ENST00000438985 WDR62O43379 1518 aa23.12■■□□□ 1.29
ARHGEF4-207ENST00000438985 TRIM41Q8WV44 630 aa23.09■■□□□ 1.29
ARHGEF4-207ENST00000438985 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
ARHGEF4-207ENST00000438985 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
ARHGEF4-207ENST00000438985 CUX2O14529 1486 aa22.9■■□□□ 1.26
ARHGEF4-207ENST00000438985 SOGA1O94964 1423 aa22.89■■□□□ 1.26
ARHGEF4-207ENST00000438985 RAD54L2Q9Y4B4 1467 aa22.87■■□□□ 1.25
ARHGEF4-207ENST00000438985 TARBP1Q13395 1621 aaKnown RBP22.86■■□□□ 1.25
ARHGEF4-207ENST00000438985 IFT140Q96RY7 1462 aa22.84■■□□□ 1.25
ARHGEF4-207ENST00000438985 ABCA10Q8WWZ4 1543 aa22.82■■□□□ 1.24
ARHGEF4-207ENST00000438985 WDR97A6NE52 1622 aa22.81■■□□□ 1.24
ARHGEF4-207ENST00000438985 RUSC2Q8N2Y8 1516 aa22.71■■□□□ 1.23
ARHGEF4-207ENST00000438985 KIF27Q86VH2 1401 aa22.7■■□□□ 1.23
ARHGEF4-207ENST00000438985 TDRD9Q8NDG6 1382 aaKnown RBP22.7■■□□□ 1.22
ARHGEF4-207ENST00000438985 ZNF608Q9ULD9 1512 aaPredicted RBP22.69■■□□□ 1.22
ARHGEF4-207ENST00000438985 ABCA5Q8WWZ7 1642 aa22.68■■□□□ 1.22
ARHGEF4-207ENST00000438985 FAM9AQ8IZU1 332 aaPredicted RBP22.66■■□□□ 1.22
ARHGEF4-207ENST00000438985 EEA1Q15075 1411 aa22.65■■□□□ 1.22
ARHGEF4-207ENST00000438985 AQRO60306 1485 aaKnown RBP eCLIP22.65■■□□□ 1.22
ARHGEF4-207ENST00000438985 GAPVD1Q14C86 1478 aa22.64■■□□□ 1.21
ARHGEF4-207ENST00000438985 EIF4G3O43432 1585 aaKnown RBP22.64■■□□□ 1.21
ARHGEF4-207ENST00000438985 PBRM1Q86U86 1689 aa22.58■■□□□ 1.2
ARHGEF4-207ENST00000438985 ERICH3Q5RHP9 1530 aa22.55■■□□□ 1.2
ARHGEF4-207ENST00000438985 GRIN2BQ13224 1484 aa22.55■■□□□ 1.2
ARHGEF4-207ENST00000438985 IGF1RP08069 1367 aa22.55■■□□□ 1.2
ARHGEF4-207ENST00000438985 CSRNP3Q8WYN3 585 aa22.53■■□□□ 1.2
ARHGEF4-207ENST00000438985 CUL7Q14999 1698 aa22.47■■□□□ 1.19
ARHGEF4-207ENST00000438985 MAGI1Q96QZ7 1491 aaPredicted RBP22.44■■□□□ 1.18
ARHGEF4-207ENST00000438985 SNAPC4Q5SXM2 1469 aa22.44■■□□□ 1.18
ARHGEF4-207ENST00000438985 CARMIL1Q5VZK9 1371 aa22.42■■□□□ 1.18
ARHGEF4-207ENST00000438985 PRXQ9BXM0 1461 aa22.42■■□□□ 1.18
ARHGEF4-207ENST00000438985 ADAMTS12P58397 1594 aa22.41■■□□□ 1.18
ARHGEF4-207ENST00000438985 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.18
ARHGEF4-207ENST00000438985 KIF21BO75037 1637 aa22.38■■□□□ 1.17
ARHGEF4-207ENST00000438985 EHMT2Q96KQ7 1210 aa22.36■■□□□ 1.17
ARHGEF4-207ENST00000438985 RAPGEF2Q9Y4G8 1499 aa22.35■■□□□ 1.17
ARHGEF4-207ENST00000438985 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
ARHGEF4-207ENST00000438985 DNAJC5Q9H3Z4 198 aa22.31■■□□□ 1.16
ARHGEF4-207ENST00000438985 LOC105371045A0A1W2PR82 267 aa22.31■■□□□ 1.16
ARHGEF4-207ENST00000438985 FBLN2P98095 1184 aa22.28■■□□□ 1.16
ARHGEF4-207ENST00000438985 CHMP7Q8WUX9 453 aaPredicted RBP22.28■■□□□ 1.16
ARHGEF4-207ENST00000438985 GOLGA3Q08378 1498 aa22.27■■□□□ 1.16
ARHGEF4-207ENST00000438985 CHD1O14646 1710 aa22.27■■□□□ 1.16
ARHGEF4-207ENST00000438985 GRIN2AQ12879 1464 aa22.27■■□□□ 1.16
ARHGEF4-207ENST00000438985 UBTFP17480 764 aaKnown RBP22.2■■□□□ 1.14
ARHGEF4-207ENST00000438985 NUP160Q12769 1436 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms