RNA–Protein interactions for RNA: ENST00000438681.6

PAX6-211, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,395 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-211ENST00000438681 NISCHQ9Y2I1 1504 aa30.24■■■□□ 2.43
PAX6-211ENST00000438681 CCDC180Q9P1Z9 1646 aa26.73■■□□□ 1.87
PAX6-211ENST00000438681 ABCC9O60706 1549 aa26.24■■□□□ 1.79
PAX6-211ENST00000438681 DCAF8L2P0C7V8 631 aa25.39■■□□□ 1.65
PAX6-211ENST00000438681 ZCCHC6Q5VYS8 1495 aaKnown RBP25.19■■□□□ 1.62
PAX6-211ENST00000438681 RB1CC1Q8TDY2 1594 aa25.15■■□□□ 1.62
PAX6-211ENST00000438681 NACADO15069 1562 aa25.13■■□□□ 1.61
PAX6-211ENST00000438681 MYO15BQ96JP2 1530 aa24.95■■□□□ 1.58
PAX6-211ENST00000438681 DCAF1Q9Y4B6 1507 aa24.92■■□□□ 1.58
PAX6-211ENST00000438681 UNC13AQ9UPW8 1703 aa24.63■■□□□ 1.53
PAX6-211ENST00000438681 PABPN1Q86U42 306 aaKnown RBP eCLIP24.61■■□□□ 1.53
PAX6-211ENST00000438681 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
PAX6-211ENST00000438681 BICRAQ9NZM4 1560 aa24.46■■□□□ 1.51
PAX6-211ENST00000438681 SHROOM4Q9ULL8 1493 aa24.13■■□□□ 1.45
PAX6-211ENST00000438681 DNAJC5BQ9UF47 199 aa24.06■■□□□ 1.44
PAX6-211ENST00000438681 EIF4G1Q04637 1599 aaKnown RBP23.78■■□□□ 1.4
PAX6-211ENST00000438681 CC2D2AQ9P2K1 1620 aa23.67■■□□□ 1.38
PAX6-211ENST00000438681 CECR2Q9BXF3 1484 aa23.64■■□□□ 1.37
PAX6-211ENST00000438681 SMARCA4P51532 1647 aa23.43■■□□□ 1.34
PAX6-211ENST00000438681 BAZ1AQ9NRL2 1556 aaPredicted RBP23.38■■□□□ 1.33
PAX6-211ENST00000438681 MROH2BQ7Z745 1585 aa23.37■■□□□ 1.33
PAX6-211ENST00000438681 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
PAX6-211ENST00000438681 NCAPD3P42695 1498 aa23.22■■□□□ 1.31
PAX6-211ENST00000438681 SMARCA2P51531 1590 aa23.2■■□□□ 1.3
PAX6-211ENST00000438681 PEG3Q9GZU2 1588 aa23.13■■□□□ 1.29
PAX6-211ENST00000438681 WIZO95785 1651 aa23.12■■□□□ 1.29
PAX6-211ENST00000438681 RSF1Q96T23 1441 aaPredicted RBP23.12■■□□□ 1.29
PAX6-211ENST00000438681 BAZ1BQ9UIG0 1483 aaKnown RBP23.09■■□□□ 1.29
PAX6-211ENST00000438681 HMGXB3Q12766 1538 aa23.08■■□□□ 1.29
PAX6-211ENST00000438681 TOP2AP11388 1531 aaKnown RBP22.81■■□□□ 1.24
PAX6-211ENST00000438681 NESP48681 1621 aa22.76■■□□□ 1.23
PAX6-211ENST00000438681 SUPT5HO00267 1087 aaKnown RBP22.74■■□□□ 1.23
PAX6-211ENST00000438681 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
PAX6-211ENST00000438681 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
PAX6-211ENST00000438681 LAMC3Q9Y6N6 1575 aa22.56■■□□□ 1.2
PAX6-211ENST00000438681 ERCC6Q03468 1493 aa22.54■■□□□ 1.2
PAX6-211ENST00000438681 CFTRP13569 1480 aa22.45■■□□□ 1.18
PAX6-211ENST00000438681 PDS5BQ9NTI5 1447 aa22.43■■□□□ 1.18
PAX6-211ENST00000438681 KIF21AQ7Z4S6 1674 aa22.42■■□□□ 1.18
PAX6-211ENST00000438681 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
PAX6-211ENST00000438681 THOC2Q8NI27 1593 aaKnown RBP22.29■■□□□ 1.16
PAX6-211ENST00000438681 CEP164Q9UPV0 1460 aa22.27■■□□□ 1.16
PAX6-211ENST00000438681 MRC2Q9UBG0 1479 aa22.22■■□□□ 1.15
PAX6-211ENST00000438681 PRDM2Q13029 1718 aa22.21■■□□□ 1.15
PAX6-211ENST00000438681 CUX2O14529 1486 aa22.19■■□□□ 1.14
PAX6-211ENST00000438681 URB2Q14146 1524 aaKnown RBP22.13■■□□□ 1.13
PAX6-211ENST00000438681 WDR62O43379 1518 aa22.12■■□□□ 1.13
PAX6-211ENST00000438681 TOPBP1Q92547 1522 aa21.99■■□□□ 1.11
PAX6-211ENST00000438681 DNMBPQ6XZF7 1577 aa21.94■■□□□ 1.1
PAX6-211ENST00000438681 CUX1P39880 1505 aa21.9■■□□□ 1.1
PAX6-211ENST00000438681 ABCC8Q09428 1581 aa21.9■■□□□ 1.1
PAX6-211ENST00000438681 AEBP2Q6ZN18 517 aaPredicted RBP21.89■■□□□ 1.1
PAX6-211ENST00000438681 POLA1P09884 1462 aaPredicted RBP21.82■■□□□ 1.08
PAX6-211ENST00000438681 FGD5Q6ZNL6 1462 aa21.79■■□□□ 1.08
PAX6-211ENST00000438681 RAD54L2Q9Y4B4 1467 aa21.79■■□□□ 1.08
PAX6-211ENST00000438681 IFT140Q96RY7 1462 aa21.79■■□□□ 1.08
PAX6-211ENST00000438681 ZNF608Q9ULD9 1512 aaPredicted RBP21.78■■□□□ 1.08
PAX6-211ENST00000438681 WRNQ14191 1432 aaPredicted RBP eCLIP21.77■■□□□ 1.08
PAX6-211ENST00000438681 SOGA1O94964 1423 aa21.75■■□□□ 1.07
PAX6-211ENST00000438681 SYNJ1O43426 1573 aa21.74■■□□□ 1.07
PAX6-211ENST00000438681 TARBP1Q13395 1621 aaKnown RBP21.73■■□□□ 1.07
PAX6-211ENST00000438681 TOP2BQ02880 1626 aa21.67■■□□□ 1.06
PAX6-211ENST00000438681 AQRO60306 1485 aaKnown RBP eCLIP21.67■■□□□ 1.06
PAX6-211ENST00000438681 TDRD9Q8NDG6 1382 aaKnown RBP21.67■■□□□ 1.06
PAX6-211ENST00000438681 BIVM-ERCC5R4GMW8 1640 aa21.67■■□□□ 1.06
PAX6-211ENST00000438681 EIF4G3O43432 1585 aaKnown RBP21.63■■□□□ 1.05
PAX6-211ENST00000438681 WDR97A6NE52 1622 aa21.56■■□□□ 1.04
PAX6-211ENST00000438681 ABCA10Q8WWZ4 1543 aa21.54■■□□□ 1.04
PAX6-211ENST00000438681 DNAJC5Q9H3Z4 198 aa21.48■■□□□ 1.03
PAX6-211ENST00000438681 GAPVD1Q14C86 1478 aa21.47■■□□□ 1.03
PAX6-211ENST00000438681 SNAPC4Q5SXM2 1469 aa21.44■■□□□ 1.02
PAX6-211ENST00000438681 ABCA5Q8WWZ7 1642 aa21.44■■□□□ 1.02
PAX6-211ENST00000438681 GRIN2BQ13224 1484 aa21.43■■□□□ 1.02
PAX6-211ENST00000438681 FBLN2P98095 1184 aa21.43■■□□□ 1.02
PAX6-211ENST00000438681 PBRM1Q86U86 1689 aa21.4■■□□□ 1.02
PAX6-211ENST00000438681 TRIM41Q8WV44 630 aa21.39■■□□□ 1.02
PAX6-211ENST00000438681 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
PAX6-211ENST00000438681 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
PAX6-211ENST00000438681 CHD1O14646 1710 aa21.34■■□□□ 1.01
PAX6-211ENST00000438681 MAGI1Q96QZ7 1491 aaPredicted RBP21.33■■□□□ 1
PAX6-211ENST00000438681 CHMP7Q8WUX9 453 aaPredicted RBP21.32■■□□□ 1
PAX6-211ENST00000438681 KIF27Q86VH2 1401 aa21.28■■□□□ 1
PAX6-211ENST00000438681 RUSC2Q8N2Y8 1516 aa21.27■■□□□ 1
PAX6-211ENST00000438681 SYNJ2O15056 1496 aa21.27■■□□□ 1
PAX6-211ENST00000438681 ERICH3Q5RHP9 1530 aa21.26■□□□□ 0.99
PAX6-211ENST00000438681 ADAMTS12P58397 1594 aa21.24■□□□□ 0.99
PAX6-211ENST00000438681 IGF1RP08069 1367 aa21.24■□□□□ 0.99
PAX6-211ENST00000438681 FHAD1B1AJZ9 1412 aa21.21■□□□□ 0.99
PAX6-211ENST00000438681 GRIN2AQ12879 1464 aa21.17■□□□□ 0.98
PAX6-211ENST00000438681 CARMIL1Q5VZK9 1371 aa21.11■□□□□ 0.97
PAX6-211ENST00000438681 CLASP1Q7Z460 1538 aa21.09■□□□□ 0.97
PAX6-211ENST00000438681 CEP170Q5SW79 1584 aa21.09■□□□□ 0.97
PAX6-211ENST00000438681 CUL7Q14999 1698 aa21.07■□□□□ 0.96
PAX6-211ENST00000438681 FAM9AQ8IZU1 332 aaPredicted RBP21.07■□□□□ 0.96
PAX6-211ENST00000438681 NUP160Q12769 1436 aa21.07■□□□□ 0.96
PAX6-211ENST00000438681 RIMBP3CA6NJZ7 1639 aa21.02■□□□□ 0.96
PAX6-211ENST00000438681 RIMBP3BA6NNM3 1639 aa21.02■□□□□ 0.96
PAX6-211ENST00000438681 RIMBP3Q9UFD9 1639 aa21.02■□□□□ 0.96
PAX6-211ENST00000438681 ARHGEF11O15085 1522 aa21.02■□□□□ 0.96
PAX6-211ENST00000438681 CSRNP3Q8WYN3 585 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms