RNA–Protein interactions for RNA: ENST00000438477.2

GAPDHP58-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 58, humanhuman

BASIC

Gene GAPDHP58, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP58-201ENST00000438477 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.08
GAPDHP58-201ENST00000438477 CHIC1Q5VXU3 224 aa14.36□□□□□ -0.11
GAPDHP58-201ENST00000438477 NISCHQ9Y2I1 1504 aa13.81□□□□□ -0.2
GAPDHP58-201ENST00000438477 ABCC9O60706 1549 aa13.28□□□□□ -0.28
GAPDHP58-201ENST00000438477 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
GAPDHP58-201ENST00000438477 SENP3Q9H4L4 574 aaPredicted RBP12.61□□□□□ -0.39
GAPDHP58-201ENST00000438477 DNAJC5Q9H3Z4 198 aa12.52□□□□□ -0.41
GAPDHP58-201ENST00000438477 PHF23Q9BUL5 403 aaPredicted RBP12.5□□□□□ -0.41
GAPDHP58-201ENST00000438477 CCDC180Q9P1Z9 1646 aa12.5□□□□□ -0.41
GAPDHP58-201ENST00000438477 PABPN1Q86U42 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
GAPDHP58-201ENST00000438477 RB1CC1Q8TDY2 1594 aa12.29□□□□□ -0.44
GAPDHP58-201ENST00000438477 NACADO15069 1562 aa12.09□□□□□ -0.47
GAPDHP58-201ENST00000438477 DCAF8L2P0C7V8 631 aa12.05□□□□□ -0.48
GAPDHP58-201ENST00000438477 CECR2Q9BXF3 1484 aa12.03□□□□□ -0.48
GAPDHP58-201ENST00000438477 BICRAQ9NZM4 1560 aa11.98□□□□□ -0.49
GAPDHP58-201ENST00000438477 CC2D2AQ9P2K1 1620 aa11.89□□□□□ -0.51
GAPDHP58-201ENST00000438477 UNC13AQ9UPW8 1703 aa11.86□□□□□ -0.51
GAPDHP58-201ENST00000438477 SHROOM4Q9ULL8 1493 aa11.75□□□□□ -0.53
GAPDHP58-201ENST00000438477 MYO15BQ96JP2 1530 aa11.75□□□□□ -0.53
GAPDHP58-201ENST00000438477 EIF4G1Q04637 1599 aaKnown RBP11.73□□□□□ -0.53
GAPDHP58-201ENST00000438477 PLPPR3Q6T4P5 718 aa11.72□□□□□ -0.53
GAPDHP58-201ENST00000438477 CUX2O14529 1486 aa11.68□□□□□ -0.54
GAPDHP58-201ENST00000438477 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
GAPDHP58-201ENST00000438477 FOXD1Q16676 465 aa11.55□□□□□ -0.56
GAPDHP58-201ENST00000438477 ERCC6Q03468 1493 aa11.49□□□□□ -0.57
GAPDHP58-201ENST00000438477 SCRIBQ14160 1630 aa11.47□□□□□ -0.57
GAPDHP58-201ENST00000438477 DCAF1Q9Y4B6 1507 aa11.35□□□□□ -0.59
GAPDHP58-201ENST00000438477 ZCCHC6Q5VYS8 1495 aaKnown RBP11.28□□□□□ -0.6
GAPDHP58-201ENST00000438477 NCAPD3P42695 1498 aa11.25□□□□□ -0.61
GAPDHP58-201ENST00000438477 NESP48681 1621 aa11.23□□□□□ -0.61
GAPDHP58-201ENST00000438477 POTEDQ86YR6 584 aa11.22□□□□□ -0.61
GAPDHP58-201ENST00000438477 OSCARQ8IYS5 282 aa11.16□□□□□ -0.62
GAPDHP58-201ENST00000438477 THOC2Q8NI27 1593 aaKnown RBP11.13□□□□□ -0.63
GAPDHP58-201ENST00000438477 ATAD2BQ9ULI0 1458 aa11.11□□□□□ -0.63
GAPDHP58-201ENST00000438477 PDS5BQ9NTI5 1447 aa11.04□□□□□ -0.64
GAPDHP58-201ENST00000438477 SMARCA2P51531 1590 aa11.03□□□□□ -0.64
GAPDHP58-201ENST00000438477 ADRA2BP18089 450 aa11.02□□□□□ -0.65
GAPDHP58-201ENST00000438477 PPP6R1Q9UPN7 881 aa11.01□□□□□ -0.65
GAPDHP58-201ENST00000438477 HMGXB3Q12766 1538 aa10.99□□□□□ -0.65
GAPDHP58-201ENST00000438477 TRHP20396 242 aaPredicted RBP10.99□□□□□ -0.65
GAPDHP58-201ENST00000438477 LAMC3Q9Y6N6 1575 aa10.98□□□□□ -0.65
GAPDHP58-201ENST00000438477 BAZ1AQ9NRL2 1556 aaPredicted RBP10.95□□□□□ -0.66
GAPDHP58-201ENST00000438477 CYB5RLQ6IPT4 315 aa10.95□□□□□ -0.66
GAPDHP58-201ENST00000438477 PIAS4Q8N2W9 510 aaPredicted RBP10.94□□□□□ -0.66
GAPDHP58-201ENST00000438477 MRC2Q9UBG0 1479 aa10.93□□□□□ -0.66
GAPDHP58-201ENST00000438477 BAZ1BQ9UIG0 1483 aaKnown RBP10.92□□□□□ -0.66
GAPDHP58-201ENST00000438477 CADPSQ9ULU8 1353 aa10.9□□□□□ -0.66
GAPDHP58-201ENST00000438477 RIMBP3CA6NJZ7 1639 aa10.9□□□□□ -0.66
GAPDHP58-201ENST00000438477 RIMBP3BA6NNM3 1639 aa10.9□□□□□ -0.66
GAPDHP58-201ENST00000438477 RIMBP3Q9UFD9 1639 aa10.9□□□□□ -0.66
GAPDHP58-201ENST00000438477 WDR62O43379 1518 aa10.89□□□□□ -0.67
GAPDHP58-201ENST00000438477 KIF21AQ7Z4S6 1674 aa10.89□□□□□ -0.67
GAPDHP58-201ENST00000438477 ARHGEF11O15085 1522 aa10.86□□□□□ -0.67
GAPDHP58-201ENST00000438477 MSH5O43196 834 aa10.86□□□□□ -0.67
GAPDHP58-201ENST00000438477 SMARCA4P51532 1647 aa10.83□□□□□ -0.68
GAPDHP58-201ENST00000438477 ILDR1Q86SU0 546 aaPredicted RBP10.78□□□□□ -0.68
GAPDHP58-201ENST00000438477 PEG3Q9GZU2 1588 aa10.76□□□□□ -0.69
GAPDHP58-201ENST00000438477 CEP164Q9UPV0 1460 aa10.74□□□□□ -0.69
GAPDHP58-201ENST00000438477 ARAP1Q96P48 1450 aa10.73□□□□□ -0.69
GAPDHP58-201ENST00000438477 FANCD2Q9BXW9 1451 aa10.72□□□□□ -0.69
GAPDHP58-201ENST00000438477 URB2Q14146 1524 aaKnown RBP10.66□□□□□ -0.7
GAPDHP58-201ENST00000438477 ZNF608Q9ULD9 1512 aaPredicted RBP10.65□□□□□ -0.7
GAPDHP58-201ENST00000438477 MROH2BQ7Z745 1585 aa10.64□□□□□ -0.71
GAPDHP58-201ENST00000438477 RSF1Q96T23 1441 aaPredicted RBP10.62□□□□□ -0.71
GAPDHP58-201ENST00000438477 CFTRP13569 1480 aa10.61□□□□□ -0.71
GAPDHP58-201ENST00000438477 FBLN2P98095 1184 aa10.6□□□□□ -0.71
GAPDHP58-201ENST00000438477 IFT140Q96RY7 1462 aa10.59□□□□□ -0.71
GAPDHP58-201ENST00000438477 AQRO60306 1485 aaKnown RBP eCLIP10.5□□□□□ -0.73
GAPDHP58-201ENST00000438477 KDM4FA0A1W2PPD8 638 aa10.49□□□□□ -0.73
GAPDHP58-201ENST00000438477 EIF4G3O43432 1585 aaKnown RBP10.43□□□□□ -0.74
GAPDHP58-201ENST00000438477 TOPBP1Q92547 1522 aa10.43□□□□□ -0.74
GAPDHP58-201ENST00000438477 CHMP7Q8WUX9 453 aaPredicted RBP10.42□□□□□ -0.74
GAPDHP58-201ENST00000438477 CHD1O14646 1710 aa10.41□□□□□ -0.74
GAPDHP58-201ENST00000438477 WIZO95785 1651 aa10.41□□□□□ -0.74
GAPDHP58-201ENST00000438477 CLASP1Q7Z460 1538 aa10.39□□□□□ -0.75
GAPDHP58-201ENST00000438477 GAPVD1Q14C86 1478 aa10.39□□□□□ -0.75
GAPDHP58-201ENST00000438477 SCAF1Q9H7N4 1312 aaKnown RBP10.37□□□□□ -0.75
GAPDHP58-201ENST00000438477 ABCC8Q09428 1581 aa10.37□□□□□ -0.75
GAPDHP58-201ENST00000438477 TDRD9Q8NDG6 1382 aaKnown RBP10.37□□□□□ -0.75
GAPDHP58-201ENST00000438477 TARBP1Q13395 1621 aaKnown RBP10.33□□□□□ -0.76
GAPDHP58-201ENST00000438477 SNAPC4Q5SXM2 1469 aa10.32□□□□□ -0.76
GAPDHP58-201ENST00000438477 SYNJ1O43426 1573 aa10.31□□□□□ -0.76
GAPDHP58-201ENST00000438477 FBXO41Q8TF61 875 aa10.3□□□□□ -0.76
GAPDHP58-201ENST00000438477 RAD54L2Q9Y4B4 1467 aa10.3□□□□□ -0.76
GAPDHP58-201ENST00000438477 FAM69CQ0P6D2 419 aa10.29□□□□□ -0.76
GAPDHP58-201ENST00000438477 SOGA1O94964 1423 aa10.29□□□□□ -0.76
GAPDHP58-201ENST00000438477 POLA1P09884 1462 aaPredicted RBP10.29□□□□□ -0.76
GAPDHP58-201ENST00000438477 DNMBPQ6XZF7 1577 aa10.28□□□□□ -0.76
GAPDHP58-201ENST00000438477 MAGI1Q96QZ7 1491 aaPredicted RBP10.26□□□□□ -0.77
GAPDHP58-201ENST00000438477 SYNJ2O15056 1496 aa10.25□□□□□ -0.77
GAPDHP58-201ENST00000438477 TOP2AP11388 1531 aaKnown RBP10.25□□□□□ -0.77
GAPDHP58-201ENST00000438477 PPP4R3CPQ6ZMV5 832 aa10.24□□□□□ -0.77
GAPDHP58-201ENST00000438477 CCDC88BA6NC98 1476 aa10.23□□□□□ -0.77
GAPDHP58-201ENST00000438477 GRIN2BQ13224 1484 aa10.22□□□□□ -0.77
GAPDHP58-201ENST00000438477 ERCC6L2Q5T890 1561 aa10.21□□□□□ -0.78
GAPDHP58-201ENST00000438477 ABCC10Q5T3U5 1492 aa10.19□□□□□ -0.78
GAPDHP58-201ENST00000438477 KIF13AQ9H1H9 1805 aa10.17□□□□□ -0.78
GAPDHP58-201ENST00000438477 NPM1P06748 294 aaKnown RBP eCLIP10.16□□□□□ -0.78
GAPDHP58-201ENST00000438477 PRDM2Q13029 1718 aa10.16□□□□□ -0.78
GAPDHP58-201ENST00000438477 HECW2Q9P2P5 1572 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms