RNA–Protein interactions for RNA: ENST00000438274.7

BECN1-202, Transcript of beclin 1, humanhuman

TSL 2 BASIC

Gene BECN1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-202ENST00000438274 AEBP2Q6ZN18 517 aaPredicted RBP23.78■■□□□ 1.4
BECN1-202ENST00000438274 CHIC1Q5VXU3 224 aa22.84■■□□□ 1.25
BECN1-202ENST00000438274 NISCHQ9Y2I1 1504 aa22.59■■□□□ 1.21
BECN1-202ENST00000438274 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.85
BECN1-202ENST00000438274 PHF23Q9BUL5 403 aaPredicted RBP20.08■□□□□ 0.8
BECN1-202ENST00000438274 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
BECN1-202ENST00000438274 ABCC9O60706 1549 aa19.4■□□□□ 0.7
BECN1-202ENST00000438274 FOXD1Q16676 465 aa18.89■□□□□ 0.61
BECN1-202ENST00000438274 DCAF8L2P0C7V8 631 aa18.88■□□□□ 0.61
BECN1-202ENST00000438274 ZCCHC6Q5VYS8 1495 aaKnown RBP18.87■□□□□ 0.61
BECN1-202ENST00000438274 NACADO15069 1562 aa18.7■□□□□ 0.58
BECN1-202ENST00000438274 RB1CC1Q8TDY2 1594 aa18.67■□□□□ 0.58
BECN1-202ENST00000438274 DCAF1Q9Y4B6 1507 aa18.66■□□□□ 0.58
BECN1-202ENST00000438274 MYO15BQ96JP2 1530 aa18.63■□□□□ 0.57
BECN1-202ENST00000438274 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
BECN1-202ENST00000438274 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
BECN1-202ENST00000438274 UNC13AQ9UPW8 1703 aa18.29■□□□□ 0.52
BECN1-202ENST00000438274 PABPN1Q86U42 306 aaKnown RBP eCLIP18.14■□□□□ 0.49
BECN1-202ENST00000438274 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
BECN1-202ENST00000438274 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
BECN1-202ENST00000438274 DNAJC5BQ9UF47 199 aa17.85■□□□□ 0.45
BECN1-202ENST00000438274 PPP6R1Q9UPN7 881 aa17.74■□□□□ 0.43
BECN1-202ENST00000438274 MSH5O43196 834 aa17.72■□□□□ 0.43
BECN1-202ENST00000438274 PIAS4Q8N2W9 510 aaPredicted RBP17.71■□□□□ 0.43
BECN1-202ENST00000438274 ADRA2BP18089 450 aa17.69■□□□□ 0.42
BECN1-202ENST00000438274 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
BECN1-202ENST00000438274 CECR2Q9BXF3 1484 aa17.6■□□□□ 0.41
BECN1-202ENST00000438274 CC2D2AQ9P2K1 1620 aa17.54■□□□□ 0.4
BECN1-202ENST00000438274 BAZ1AQ9NRL2 1556 aaPredicted RBP17.5■□□□□ 0.39
BECN1-202ENST00000438274 SMARCA4P51532 1647 aa17.49■□□□□ 0.39
BECN1-202ENST00000438274 MROH2BQ7Z745 1585 aa17.44■□□□□ 0.38
BECN1-202ENST00000438274 RSF1Q96T23 1441 aaPredicted RBP17.33■□□□□ 0.36
BECN1-202ENST00000438274 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
BECN1-202ENST00000438274 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
BECN1-202ENST00000438274 WIZO95785 1651 aa17.28■□□□□ 0.36
BECN1-202ENST00000438274 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.36
BECN1-202ENST00000438274 NCAPD3P42695 1498 aa17.25■□□□□ 0.35
BECN1-202ENST00000438274 BAZ1BQ9UIG0 1483 aaKnown RBP17.21■□□□□ 0.35
BECN1-202ENST00000438274 HMGXB3Q12766 1538 aa17.18■□□□□ 0.34
BECN1-202ENST00000438274 SUPT5HO00267 1087 aaKnown RBP17.16■□□□□ 0.34
BECN1-202ENST00000438274 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
BECN1-202ENST00000438274 CCDC88BA6NC98 1476 aa16.89■□□□□ 0.29
BECN1-202ENST00000438274 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
BECN1-202ENST00000438274 NESP48681 1621 aa16.82■□□□□ 0.28
BECN1-202ENST00000438274 CADPSQ9ULU8 1353 aa16.78■□□□□ 0.28
BECN1-202ENST00000438274 LAMC3Q9Y6N6 1575 aa16.76■□□□□ 0.27
BECN1-202ENST00000438274 ERCC6Q03468 1493 aa16.76■□□□□ 0.27
BECN1-202ENST00000438274 CFTRP13569 1480 aa16.73■□□□□ 0.27
BECN1-202ENST00000438274 PDS5BQ9NTI5 1447 aa16.69■□□□□ 0.26
BECN1-202ENST00000438274 PRDM2Q13029 1718 aa16.63■□□□□ 0.25
BECN1-202ENST00000438274 CUX2O14529 1486 aa16.62■□□□□ 0.25
BECN1-202ENST00000438274 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
BECN1-202ENST00000438274 FANCD2Q9BXW9 1451 aa16.6■□□□□ 0.25
BECN1-202ENST00000438274 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
BECN1-202ENST00000438274 THOC2Q8NI27 1593 aaKnown RBP16.51■□□□□ 0.23
BECN1-202ENST00000438274 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
BECN1-202ENST00000438274 WDR62O43379 1518 aa16.42■□□□□ 0.22
BECN1-202ENST00000438274 URB2Q14146 1524 aaKnown RBP16.42■□□□□ 0.22
BECN1-202ENST00000438274 ABCC8Q09428 1581 aa16.4■□□□□ 0.22
BECN1-202ENST00000438274 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
BECN1-202ENST00000438274 TOPBP1Q92547 1522 aa16.36■□□□□ 0.21
BECN1-202ENST00000438274 DNMBPQ6XZF7 1577 aa16.36■□□□□ 0.21
BECN1-202ENST00000438274 CUX1P39880 1505 aa16.35■□□□□ 0.21
BECN1-202ENST00000438274 WRNQ14191 1432 aaPredicted RBP eCLIP16.33■□□□□ 0.21
BECN1-202ENST00000438274 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
BECN1-202ENST00000438274 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
BECN1-202ENST00000438274 POLA1P09884 1462 aaPredicted RBP16.25■□□□□ 0.19
BECN1-202ENST00000438274 FGD5Q6ZNL6 1462 aa16.25■□□□□ 0.19
BECN1-202ENST00000438274 BIVM-ERCC5R4GMW8 1640 aa16.25■□□□□ 0.19
BECN1-202ENST00000438274 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
BECN1-202ENST00000438274 SOGA1O94964 1423 aa16.18■□□□□ 0.18
BECN1-202ENST00000438274 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
BECN1-202ENST00000438274 DNAJC5Q9H3Z4 198 aa16.17■□□□□ 0.18
BECN1-202ENST00000438274 DMRT2Q9Y5R5 561 aa16.17■□□□□ 0.18
BECN1-202ENST00000438274 MAPK8IP2Q13387 824 aaPredicted RBP16.17■□□□□ 0.18
BECN1-202ENST00000438274 TRIM41Q8WV44 630 aa16.17■□□□□ 0.18
BECN1-202ENST00000438274 TARBP1Q13395 1621 aaKnown RBP16.16■□□□□ 0.18
BECN1-202ENST00000438274 ZNF608Q9ULD9 1512 aaPredicted RBP16.12■□□□□ 0.17
BECN1-202ENST00000438274 TDRD9Q8NDG6 1382 aaKnown RBP16.09■□□□□ 0.17
BECN1-202ENST00000438274 WDR97A6NE52 1622 aa16.08■□□□□ 0.17
BECN1-202ENST00000438274 ABCA10Q8WWZ4 1543 aa16.08■□□□□ 0.16
BECN1-202ENST00000438274 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.163e-9■■■■□ 25.8
BECN1-202ENST00000438274 EIF4G3O43432 1585 aaKnown RBP16.06■□□□□ 0.16
BECN1-202ENST00000438274 PPP4R3CPQ6ZMV5 832 aa16.06■□□□□ 0.16
BECN1-202ENST00000438274 GAPVD1Q14C86 1478 aa16■□□□□ 0.15
BECN1-202ENST00000438274 ABCA5Q8WWZ7 1642 aa16■□□□□ 0.15
BECN1-202ENST00000438274 KIF27Q86VH2 1401 aa15.97■□□□□ 0.15
BECN1-202ENST00000438274 PBRM1Q86U86 1689 aa15.96■□□□□ 0.15
BECN1-202ENST00000438274 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
BECN1-202ENST00000438274 GRIN2BQ13224 1484 aa15.95■□□□□ 0.14
BECN1-202ENST00000438274 RUSC2Q8N2Y8 1516 aa15.94■□□□□ 0.14
BECN1-202ENST00000438274 SNAPC4Q5SXM2 1469 aa15.91■□□□□ 0.14
BECN1-202ENST00000438274 ERICH3Q5RHP9 1530 aa15.89■□□□□ 0.13
BECN1-202ENST00000438274 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
BECN1-202ENST00000438274 MAGI1Q96QZ7 1491 aaPredicted RBP15.87■□□□□ 0.13
BECN1-202ENST00000438274 IGF1RP08069 1367 aa15.87■□□□□ 0.13
BECN1-202ENST00000438274 FBLN2P98095 1184 aa15.87■□□□□ 0.13
BECN1-202ENST00000438274 ADAMTS12P58397 1594 aa15.83■□□□□ 0.13
BECN1-202ENST00000438274 CHMP7Q8WUX9 453 aaPredicted RBP15.83■□□□□ 0.12
BECN1-202ENST00000438274 SYNJ2O15056 1496 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms