RNA–Protein interactions for RNA: ENST00000438144.6

ZNF143-208, Transcript of zinc finger protein 143, humanhuman

TSL 3

Gene ZNF143, Length 644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF143-208ENST00000438144 AEBP2Q6ZN18 517 aaPredicted RBP26.4■■□□□ 1.82
ZNF143-208ENST00000438144 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
ZNF143-208ENST00000438144 NISCHQ9Y2I1 1504 aa23.04■■□□□ 1.28
ZNF143-208ENST00000438144 SENP3Q9H4L4 574 aaPredicted RBP22.63■■□□□ 1.21
ZNF143-208ENST00000438144 PHF23Q9BUL5 403 aaPredicted RBP22.3■■□□□ 1.16
ZNF143-208ENST00000438144 ABCC9O60706 1549 aa21.42■■□□□ 1.02
ZNF143-208ENST00000438144 FOXD1Q16676 465 aa20.99■□□□□ 0.95
ZNF143-208ENST00000438144 CCDC180Q9P1Z9 1646 aa20.93■□□□□ 0.94
ZNF143-208ENST00000438144 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
ZNF143-208ENST00000438144 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
ZNF143-208ENST00000438144 RB1CC1Q8TDY2 1594 aa20.18■□□□□ 0.82
ZNF143-208ENST00000438144 NACADO15069 1562 aa19.91■□□□□ 0.78
ZNF143-208ENST00000438144 PABPN1Q86U42 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
ZNF143-208ENST00000438144 DCAF8L2P0C7V8 631 aa19.82■□□□□ 0.76
ZNF143-208ENST00000438144 PIAS4Q8N2W9 510 aaPredicted RBP19.72■□□□□ 0.75
ZNF143-208ENST00000438144 PPP6R1Q9UPN7 881 aa19.7■□□□□ 0.74
ZNF143-208ENST00000438144 UNC13AQ9UPW8 1703 aa19.7■□□□□ 0.74
ZNF143-208ENST00000438144 ADRA2BP18089 450 aa19.69■□□□□ 0.74
ZNF143-208ENST00000438144 MSH5O43196 834 aa19.68■□□□□ 0.74
ZNF143-208ENST00000438144 BICRAQ9NZM4 1560 aa19.53■□□□□ 0.72
ZNF143-208ENST00000438144 MYO15BQ96JP2 1530 aa19.42■□□□□ 0.7
ZNF143-208ENST00000438144 CECR2Q9BXF3 1484 aa19.35■□□□□ 0.69
ZNF143-208ENST00000438144 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
ZNF143-208ENST00000438144 SHROOM4Q9ULL8 1493 aa19.26■□□□□ 0.67
ZNF143-208ENST00000438144 DNAJC5Q9H3Z4 198 aa19.24■□□□□ 0.67
ZNF143-208ENST00000438144 EIF4G1Q04637 1599 aaKnown RBP19.15■□□□□ 0.66
ZNF143-208ENST00000438144 SCRIBQ14160 1630 aa19.04■□□□□ 0.64
ZNF143-208ENST00000438144 DCAF1Q9Y4B6 1507 aa18.98■□□□□ 0.63
ZNF143-208ENST00000438144 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
ZNF143-208ENST00000438144 POTEDQ86YR6 584 aa18.85■□□□□ 0.61
ZNF143-208ENST00000438144 CUX2O14529 1486 aa18.67■□□□□ 0.58
ZNF143-208ENST00000438144 ERCC6Q03468 1493 aa18.59■□□□□ 0.57
ZNF143-208ENST00000438144 NCAPD3P42695 1498 aa18.35■□□□□ 0.53
ZNF143-208ENST00000438144 TRIM41Q8WV44 630 aa18.26■□□□□ 0.51
ZNF143-208ENST00000438144 NESP48681 1621 aa18.23■□□□□ 0.51
ZNF143-208ENST00000438144 ATAD2BQ9ULI0 1458 aa18.22■□□□□ 0.51
ZNF143-208ENST00000438144 SMARCA2P51531 1590 aa18.19■□□□□ 0.5
ZNF143-208ENST00000438144 HMGXB3Q12766 1538 aa18.18■□□□□ 0.5
ZNF143-208ENST00000438144 SCAF1Q9H7N4 1312 aaKnown RBP18.16■□□□□ 0.5
ZNF143-208ENST00000438144 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
ZNF143-208ENST00000438144 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
ZNF143-208ENST00000438144 BAZ1BQ9UIG0 1483 aaKnown RBP18.07■□□□□ 0.48
ZNF143-208ENST00000438144 LAMC3Q9Y6N6 1575 aa18.05■□□□□ 0.48
ZNF143-208ENST00000438144 MAPK8IP2Q13387 824 aaPredicted RBP18.01■□□□□ 0.47
ZNF143-208ENST00000438144 KIF21AQ7Z4S6 1674 aa18.01■□□□□ 0.47
ZNF143-208ENST00000438144 PDS5BQ9NTI5 1447 aa17.99■□□□□ 0.47
ZNF143-208ENST00000438144 BAZ1AQ9NRL2 1556 aaPredicted RBP17.95■□□□□ 0.46
ZNF143-208ENST00000438144 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
ZNF143-208ENST00000438144 PEG3Q9GZU2 1588 aa17.89■□□□□ 0.45
ZNF143-208ENST00000438144 MRC2Q9UBG0 1479 aa17.84■□□□□ 0.45
ZNF143-208ENST00000438144 PPP4R3CPQ6ZMV5 832 aa17.82■□□□□ 0.44
ZNF143-208ENST00000438144 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
ZNF143-208ENST00000438144 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
ZNF143-208ENST00000438144 WDR62O43379 1518 aa17.78■□□□□ 0.44
ZNF143-208ENST00000438144 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
ZNF143-208ENST00000438144 CEP164Q9UPV0 1460 aa17.69■□□□□ 0.42
ZNF143-208ENST00000438144 FANCD2Q9BXW9 1451 aa17.6■□□□□ 0.41
ZNF143-208ENST00000438144 RIMBP3CA6NJZ7 1639 aa17.56■□□□□ 0.4
ZNF143-208ENST00000438144 RIMBP3BA6NNM3 1639 aa17.56■□□□□ 0.4
ZNF143-208ENST00000438144 RIMBP3Q9UFD9 1639 aa17.56■□□□□ 0.4
ZNF143-208ENST00000438144 WIZO95785 1651 aa17.53■□□□□ 0.4
ZNF143-208ENST00000438144 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
ZNF143-208ENST00000438144 CFTRP13569 1480 aa17.46■□□□□ 0.39
ZNF143-208ENST00000438144 URB2Q14146 1524 aaKnown RBP17.45■□□□□ 0.38
ZNF143-208ENST00000438144 ARHGEF11O15085 1522 aa17.44■□□□□ 0.38
ZNF143-208ENST00000438144 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
ZNF143-208ENST00000438144 CYB5RLQ6IPT4 315 aa17.41■□□□□ 0.38
ZNF143-208ENST00000438144 IFT140Q96RY7 1462 aa17.34■□□□□ 0.37
ZNF143-208ENST00000438144 ZNF608Q9ULD9 1512 aaPredicted RBP17.32■□□□□ 0.36
ZNF143-208ENST00000438144 HOXD11P31277 338 aaPredicted RBP17.32■□□□□ 0.36
ZNF143-208ENST00000438144 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
ZNF143-208ENST00000438144 NCBP3Q53F19 620 aaKnown RBP17.27■□□□□ 0.36
ZNF143-208ENST00000438144 RNF216Q9NWF9 866 aaPredicted RBP17.27■□□□□ 0.36
ZNF143-208ENST00000438144 TOP2AP11388 1531 aaKnown RBP17.26■□□□□ 0.35
ZNF143-208ENST00000438144 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
ZNF143-208ENST00000438144 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
ZNF143-208ENST00000438144 CHD1O14646 1710 aa17.22■□□□□ 0.35
ZNF143-208ENST00000438144 FBLN2P98095 1184 aa17.22■□□□□ 0.35
ZNF143-208ENST00000438144 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
ZNF143-208ENST00000438144 TOPBP1Q92547 1522 aa17.2■□□□□ 0.34
ZNF143-208ENST00000438144 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
ZNF143-208ENST00000438144 ABCC8Q09428 1581 aa17.18■□□□□ 0.34
ZNF143-208ENST00000438144 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.33
ZNF143-208ENST00000438144 DNMBPQ6XZF7 1577 aa17.1■□□□□ 0.33
ZNF143-208ENST00000438144 CCDC88BA6NC98 1476 aa17.07■□□□□ 0.32
ZNF143-208ENST00000438144 TARBP1Q13395 1621 aaKnown RBP17.06■□□□□ 0.32
ZNF143-208ENST00000438144 CHMP7Q8WUX9 453 aaPredicted RBP16.99■□□□□ 0.31
ZNF143-208ENST00000438144 POLA1P09884 1462 aaPredicted RBP16.98■□□□□ 0.31
ZNF143-208ENST00000438144 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
ZNF143-208ENST00000438144 TDRD9Q8NDG6 1382 aaKnown RBP16.96■□□□□ 0.31
ZNF143-208ENST00000438144 CLASP1Q7Z460 1538 aa16.96■□□□□ 0.3
ZNF143-208ENST00000438144 SNAPC4Q5SXM2 1469 aa16.94■□□□□ 0.3
ZNF143-208ENST00000438144 SOGA1O94964 1423 aa16.94■□□□□ 0.3
ZNF143-208ENST00000438144 RAD54L2Q9Y4B4 1467 aa16.93■□□□□ 0.3
ZNF143-208ENST00000438144 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
ZNF143-208ENST00000438144 WDR97A6NE52 1622 aa16.89■□□□□ 0.29
ZNF143-208ENST00000438144 MAGI1Q96QZ7 1491 aaPredicted RBP16.89■□□□□ 0.29
ZNF143-208ENST00000438144 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
ZNF143-208ENST00000438144 SYNJ2O15056 1496 aa16.84■□□□□ 0.29
ZNF143-208ENST00000438144 GRIN2BQ13224 1484 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms